Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
---|---|
Accession | NC_011094 |
Length | 4,709,075 |
Click here to switch to the map view.
The map label for this gene is yeaQ [H]
Identifier: 194734252
GI number: 194734252
Start: 1319808
End: 1320056
Strand: Direct
Name: yeaQ [H]
Synonym: SeSA_A1365
Alternate gene names: 194734252
Gene position: 1319808-1320056 (Clockwise)
Preceding gene: 194734752
Following gene: 194735682
Centisome position: 28.03
GC content: 45.78
Gene sequence:
>249_bases ATGGGCATTCTTTCATGGATTATTTTTGGACTTATTGCGGGTATTTTGGCTAAGTGGATCATGCCAGGTAAAGATGGTGG CGGATTCTTTATGACGATCATTCTGGGGATCGTTGGTGCGGTAGTCGGAGGATGGATCAGTACGTTCTTTGGCTTTGGCA AAGTGGATGGTTTCAACTTCGGCAGCTTTGCAGTCGCGGTGATCGGCGCGATTGTCGTGCTGTTAATCTACAGAAAAATC AAAAGCTAA
Upstream 100 bases:
>100_bases CTAAAAGGTGATGGATATCACAAACTTCACTTTCCTGACGATGTGCTATTCTTTTTAACGGCAAATAAACCGCTAACGTT AAGACATAAGTGAGGAAAAA
Downstream 100 bases:
>100_bases ACGCAGAACTTTCAGAGATAATAAAGGCTACGACAGGTAGCCTTTATTATTCAAAATGAATTTACCACCAGCCCAGTTCG GTACCCGCCGCCGCAATTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTIILGIVGAVVGGWISTFFGFGKVDGFNFGSFAVAVIGAIVVLLIYRKI KS
Sequences:
>Translated_82_residues MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTIILGIVGAVVGGWISTFFGFGKVDGFNFGSFAVAVIGAIVVLLIYRKI KS >Mature_81_residues GILSWIIFGLIAGILAKWIMPGKDGGGFFMTIILGIVGAVVGGWISTFFGFGKVDGFNFGSFAVAVIGAIVVLLIYRKIK S
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0410 family [H]
Homologues:
Organism=Escherichia coli, GI1788096, Length=82, Percent_Identity=95.1219512195122, Blast_Score=126, Evalue=2e-31, Organism=Escherichia coli, GI1787445, Length=83, Percent_Identity=67.4698795180723, Blast_Score=103, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007341 [H]
Pfam domain/function: PF04226 Transgly_assoc [H]
EC number: NA
Molecular weight: Translated: 8643; Mature: 8511
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTIILGIVGAVVGGWISTFFGFGKVDGFNF CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH GSFAVAVIGAIVVLLIYRKIKS HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GILSWIIFGLIAGILAKWIMPGKDGGGFFMTIILGIVGAVVGGWISTFFGFGKVDGFNF CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH GSFAVAVIGAIVVLLIYRKIKS HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]