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The map label for this gene is yggR [H]

Identifier: 194734156

GI number: 194734156

Start: 3159940

End: 3160920

Strand: Reverse

Name: yggR [H]

Synonym: SeSA_A3273

Alternate gene names: 194734156

Gene position: 3160920-3159940 (Counterclockwise)

Preceding gene: 194737854

Following gene: 194735680

Centisome position: 67.12

GC content: 57.39

Gene sequence:

>981_bases
ATGAATATGGAAGAAATTGTGACGCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGTAACGCCTGGCCTGCGCG
ATGGCGCAAACAAGGACGCATGGAGAACGCGCCTTTTACCGCGCCTGATGTCGACAGGCTTCTGCTTGATTGGCTTAATG
ATGCGCAACAATATCAGTGGCGAACGCACGGCCAGCTTGATTTCGCCGTCTCGCTGTCTGGCACGCGGCGCCTGCGCGCC
AGTGCGTTCACACATCAACAGGGAACGTCGCTGGCGCTACGGCTATTGCCCGAGCGTTGTCCTGATCTGGCGGAAATCCA
GACGCCGCCGATAGTACCCGCACTGCTTGCCAGCGAGAACGGACTGATTCTGGTCACTGGCGCTACTGGCTGCGGGAAGT
CCACCACGCTGGCGGCGATGGTGGGATATCTTAATCAACATGCCGATAAACATATCCTGACGCTGGAAGATCCTATTGAA
TACCGTTACACCAGCAAGCGTTGCCTGATACAGCAGCGGGAAATCGGCCAGCATTGCGCCACTTTTGCCGCCGGGCTGCG
CGCGGCGTTACGTGAAGATCCCGATGTCATTTTACTGGGAGAGCTGCGTGACAGCGAGACCATTCGCCTGGCGCTGACGG
CGGCGGAAACGGGGCATCTGGTACTGGCAACCCTGCATACTCGCGGTGCGGCGCAGGCGGTGGAAAGATTAGTGGATAGT
TTTCCGGCGCAGGAAAAAGAACCGGTACGCAGTCAACTGGCGGGTAGTCTGCGCGCCGTACTATCGCAAAAACTGGAGGT
CGACAGGCAGGATGGGCGCGTGGCGTTGTTTGAATTACTGATTAATACGCCAGCCACAGGGAATTTGATCCGTGAAGGCA
AACTCCATCAGTTGGCCCACGTGATACAAACCGGGCAGCAGCAGGGGATGATGACATTCGCCCAGAGCGCGCAATGGCGT
CAGGCGCAGGGACGGCTGTAG

Upstream 100 bases:

>100_bases
TCTTCTGAAGAGCGGCCGCAACGCGTCGCCGCGGCGGAGATTTTGTCCCGGATGTATGCCAGGTTATGCGCGATATCGTT
CATTTTCCGAGGATGTTTAT

Downstream 100 bases:

>100_bases
CGAAGATGGCGGCGTAGGGGGGAAAGTGTTGACTGGCGCGGTGGATTGAACGGCATACAGGCTTGTATCCTGGCGAACCG
GCGTTAAAATCGCAGCTTTG

Product: twitching mobility protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MNMEEIVTLSVKHNVSDLHLCNAWPARWRKQGRMENAPFTAPDVDRLLLDWLNDAQQYQWRTHGQLDFAVSLSGTRRLRA
SAFTHQQGTSLALRLLPERCPDLAEIQTPPIVPALLASENGLILVTGATGCGKSTTLAAMVGYLNQHADKHILTLEDPIE
YRYTSKRCLIQQREIGQHCATFAAGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKEPVRSQLAGSLRAVLSQKLEVDRQDGRVALFELLINTPATGNLIREGKLHQLAHVIQTGQQQGMMTFAQSAQWR
QAQGRL

Sequences:

>Translated_326_residues
MNMEEIVTLSVKHNVSDLHLCNAWPARWRKQGRMENAPFTAPDVDRLLLDWLNDAQQYQWRTHGQLDFAVSLSGTRRLRA
SAFTHQQGTSLALRLLPERCPDLAEIQTPPIVPALLASENGLILVTGATGCGKSTTLAAMVGYLNQHADKHILTLEDPIE
YRYTSKRCLIQQREIGQHCATFAAGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKEPVRSQLAGSLRAVLSQKLEVDRQDGRVALFELLINTPATGNLIREGKLHQLAHVIQTGQQQGMMTFAQSAQWR
QAQGRL
>Mature_326_residues
MNMEEIVTLSVKHNVSDLHLCNAWPARWRKQGRMENAPFTAPDVDRLLLDWLNDAQQYQWRTHGQLDFAVSLSGTRRLRA
SAFTHQQGTSLALRLLPERCPDLAEIQTPPIVPALLASENGLILVTGATGCGKSTTLAAMVGYLNQHADKHILTLEDPIE
YRYTSKRCLIQQREIGQHCATFAAGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKEPVRSQLAGSLRAVLSQKLEVDRQDGRVALFELLINTPATGNLIREGKLHQLAHVIQTGQQQGMMTFAQSAQWR
QAQGRL

Specific function: Unknown

COG id: COG2805

COG function: function code NU; Tfp pilus assembly protein, pilus retraction ATPase PilT

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI87082188, Length=326, Percent_Identity=79.4478527607362, Blast_Score=525, Evalue=1e-150,
Organism=Escherichia coli, GI1789723, Length=185, Percent_Identity=43.2432432432432, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1786296, Length=273, Percent_Identity=34.0659340659341, Blast_Score=114, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006321
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 36152; Mature: 36152

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMEEIVTLSVKHNVSDLHLCNAWPARWRKQGRMENAPFTAPDVDRLLLDWLNDAQQYQW
CCHHHEEEEEEECCCCCEEECCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RTHGQLDFAVSLSGTRRLRASAFTHQQGTSLALRLLPERCPDLAEIQTPPIVPALLASEN
HCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHCCCCCCCHHHHCCCC
GLILVTGATGCGKSTTLAAMVGYLNQHADKHILTLEDPIEYRYTSKRCLIQQREIGQHCA
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCHHHHHHHHHHHHHHH
TFAAGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHH
FPAQEKEPVRSQLAGSLRAVLSQKLEVDRQDGRVALFELLINTPATGNLIREGKLHQLAH
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCHHHCCHHHHHHH
VIQTGQQQGMMTFAQSAQWRQAQGRL
HHHHCHHCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNMEEIVTLSVKHNVSDLHLCNAWPARWRKQGRMENAPFTAPDVDRLLLDWLNDAQQYQW
CCHHHEEEEEEECCCCCEEECCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RTHGQLDFAVSLSGTRRLRASAFTHQQGTSLALRLLPERCPDLAEIQTPPIVPALLASEN
HCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHCCCCCCCHHHHCCCC
GLILVTGATGCGKSTTLAAMVGYLNQHADKHILTLEDPIEYRYTSKRCLIQQREIGQHCA
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCHHHHHHHHHHHHHHH
TFAAGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHH
FPAQEKEPVRSQLAGSLRAVLSQKLEVDRQDGRVALFELLINTPATGNLIREGKLHQLAH
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCHHHCCHHHHHHH
VIQTGQQQGMMTFAQSAQWRQAQGRL
HHHHCHHCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]