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The map label for this gene is cse4 [H]

Identifier: 194734074

GI number: 194734074

Start: 2985446

End: 2986504

Strand: Reverse

Name: cse4 [H]

Synonym: SeSA_A3095

Alternate gene names: 194734074

Gene position: 2986504-2985446 (Counterclockwise)

Preceding gene: 194734696

Following gene: 194737877

Centisome position: 63.42

GC content: 50.33

Gene sequence:

>1059_bases
ATGACAACTTTTATTCAACTGCATTTATTGACTGCTTATGCGCCCGCTAACCTGAACCGTGATGACTCTGGGCGACCGAA
AACAGCGTATATGGGCGGCGTAGAGCGTCTGCGCGTATCATCGCAAAGCCTGAAACGCGCCTGGCGCGTATCGGAAACCT
TTGAAGGCGCGATGGATGGATTTATGGGTAAGCGTACTCGTCGAATTGGCGTGGATTATGTTTATCGTCCGATGATTGCC
GCTGGCGTTACCGGGAAAATAGCGAAAAGCGCAGCGGAGAAAATTGCTGCGCAATTTGGCAAGTTAAAGAGTGATAAAAA
TGCGCCCGAAGAAAAAAATCTCGAAATTGAGCAGATCGTTCACGTCAGTAACCATGAAATTAGTTTGATTAAACAACTGG
TTGATACACTGATCGCTGACAAACGCGAACCTAACGATGAAGAAGTGAAGCTTTTGCGCAAAGAGCAGCGTAGCGTAGAT
ATGGCGCTGTTTGGCCGTATGCTGGCGTCATCGCCTGAGTTCAACGTCGAGGCTGCTTGTCAGGTATCCCATGCGTTGGG
CGTAAGTGCCGTGACCGTTGAGTCTGATTTTTTCACCGCCGTTGACGATCTGAATAATAAAGAGGAAGACGCAGGTTCCG
GGCATATGGGCGAGCAGGGTTTTGCCTCGGCGCTTTTCTATACCTATGTCTGTATCAGCCGCGATCTGCTGGTGGAAAAC
CTGGGTGGTAACGAAGAACTGGCGAAGCGTACTATTGCGGCACTCACTGAAACAGCGTTAACCGTCTCGCCAACCGGTAA
ACAAAACAGCTTCGCTTCTCGTGCCTATGCCACCTATGCGTTGGCCGAAGTCGGGCAAAAACAACCGCGTTCTCTGGCGA
CGGCATTTTTCCAGCCGGTACGCGATACCGATCAAATTCCTGCGGCAATAACCCGTTTAAAACAGCAGCGCGCCAGCTTC
GATAGCGTATACGGAAACTGTGCAGACGATTATCGCGAGTTGAACGTTCAGGAAGGTACGGGATCTCTGGCGGAATTACT
GGCCTTTGTTAGCCAGTAA

Upstream 100 bases:

>100_bases
CCGGAATTCCGTACCCCCTTTGAACGAAATCGCATCCGTTGGGCGAACGAATATCTTTCCACGTCGCGTGGCAAATAATC
ATTTTTAGAAGGATTTGATA

Downstream 100 bases:

>100_bases
GGATGAATAATGAAGGAATATCTGGTTTTTCAGCTCTATGCGCCGCTGGCGTCGTGGGGGGAAGAAGCGTCTGGCGAGAT
TCGCCACTCAGCTACGGTTC

Product: CRISPR-associated protein, Cse4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MTTFIQLHLLTAYAPANLNRDDSGRPKTAYMGGVERLRVSSQSLKRAWRVSETFEGAMDGFMGKRTRRIGVDYVYRPMIA
AGVTGKIAKSAAEKIAAQFGKLKSDKNAPEEKNLEIEQIVHVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVD
MALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVEN
LGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLATAFFQPVRDTDQIPAAITRLKQQRASF
DSVYGNCADDYRELNVQEGTGSLAELLAFVSQ

Sequences:

>Translated_352_residues
MTTFIQLHLLTAYAPANLNRDDSGRPKTAYMGGVERLRVSSQSLKRAWRVSETFEGAMDGFMGKRTRRIGVDYVYRPMIA
AGVTGKIAKSAAEKIAAQFGKLKSDKNAPEEKNLEIEQIVHVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVD
MALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVEN
LGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLATAFFQPVRDTDQIPAAITRLKQQRASF
DSVYGNCADDYRELNVQEGTGSLAELLAFVSQ
>Mature_351_residues
TTFIQLHLLTAYAPANLNRDDSGRPKTAYMGGVERLRVSSQSLKRAWRVSETFEGAMDGFMGKRTRRIGVDYVYRPMIAA
GVTGKIAKSAAEKIAAQFGKLKSDKNAPEEKNLEIEQIVHVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVDM
ALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVENL
GGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLATAFFQPVRDTDQIPAAITRLKQQRASFD
SVYGNCADDYRELNVQEGTGSLAELLAFVSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789116, Length=316, Percent_Identity=30.379746835443, Blast_Score=121, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010148 [H]

Pfam domain/function: PF09344 Cas_CT1975 [H]

EC number: NA

Molecular weight: Translated: 38635; Mature: 38504

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFIQLHLLTAYAPANLNRDDSGRPKTAYMGGVERLRVSSQSLKRAWRVSETFEGAMDG
CCEEEEEEEHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMGKRTRRIGVDYVYRPMIAAGVTGKIAKSAAEKIAAQFGKLKSDKNAPEEKNLEIEQIV
HHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHH
HVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAAC
HCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVEN
HHHHHHCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
LGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLATAFFQPV
CCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
RDTDQIPAAITRLKQQRASFDSVYGNCADDYRELNVQEGTGSLAELLAFVSQ
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TTFIQLHLLTAYAPANLNRDDSGRPKTAYMGGVERLRVSSQSLKRAWRVSETFEGAMDG
CEEEEEEEHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMGKRTRRIGVDYVYRPMIAAGVTGKIAKSAAEKIAAQFGKLKSDKNAPEEKNLEIEQIV
HHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHH
HVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAAC
HCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVEN
HHHHHHCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
LGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLATAFFQPV
CCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
RDTDQIPAAITRLKQQRASFDSVYGNCADDYRELNVQEGTGSLAELLAFVSQ
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]