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The map label for this gene is lemA [H]

Identifier: 194334623

GI number: 194334623

Start: 1988275

End: 1988871

Strand: Reverse

Name: lemA [H]

Synonym: Paes_1824

Alternate gene names: 194334623

Gene position: 1988871-1988275 (Counterclockwise)

Preceding gene: 194334625

Following gene: 194334622

Centisome position: 79.15

GC content: 50.42

Gene sequence:

>597_bases
ATGAGATATTCTGTTTCCAGACTTTTTGTTCTGCTTGTGCTGACCGTTATGTCAGGTATGCTGAGCAGCTGCGGCTATAA
CGCTATACAGCAGAACGACGAATCGGTCAACAAGGCGTGGGGTGATCTCGAATCGCAGCTTCAGCGACGTTCAGACCTTA
TTCCCAACCTCGTCGCCACAGTCAAAGGTGCAGCGGATTTCGAGCAGGAGACGCTTACAGGTGTTATTGAAGCTCGCGCC
AAGGCCTCTTCTGTGCAACTGACGCCTGAAATGCTCAGCGATCCACAGGCAATGCAGCAGTTTCAGAGCGCTCAGGGAGA
ACTGTCGGGCATGCTTTCCCGGCTTATGGTCGTTGTCGAACGCTACCCGGAACTCAAGGCCAACCAGAATTTCAGAGATC
TCCAGAACCAGCTGGAAGGAACTGAAAATCGTATCAGCGTAGCCCGTCAGCGATACAATGGTGCTGTTGAGGTTTTCAAC
TATTCGATACGAATGTTTCCCAATTCAATGACCAACGGTATGTTGCTGCATCTCAAACCAAAAGAGTATTTCAAAGCCGA
TGCCGCGTCGCGAGAGGTTCCTGCGGTTAATTTCTGA

Upstream 100 bases:

>100_bases
TGCGGCAATTGCTCTATTTTAGTCCTTGCAGGGGGAACTCATTGAGAGGATTTTTTGCTATTATAGGACGATATTTTTAA
CCTTCAAATACGACGGGATT

Downstream 100 bases:

>100_bases
TGGTATCGCGCTGTAGGAGAACTCTGACAATGATTTTTAAAGTAATGCAAAGTATCATACAGCGGCTTCCGGCTTTGTGT
GTCGCCATACTGATGCTCCT

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRYSVSRLFVLLVLTVMSGMLSSCGYNAIQQNDESVNKAWGDLESQLQRRSDLIPNLVATVKGAADFEQETLTGVIEARA
KASSVQLTPEMLSDPQAMQQFQSAQGELSGMLSRLMVVVERYPELKANQNFRDLQNQLEGTENRISVARQRYNGAVEVFN
YSIRMFPNSMTNGMLLHLKPKEYFKADAASREVPAVNF

Sequences:

>Translated_198_residues
MRYSVSRLFVLLVLTVMSGMLSSCGYNAIQQNDESVNKAWGDLESQLQRRSDLIPNLVATVKGAADFEQETLTGVIEARA
KASSVQLTPEMLSDPQAMQQFQSAQGELSGMLSRLMVVVERYPELKANQNFRDLQNQLEGTENRISVARQRYNGAVEVFN
YSIRMFPNSMTNGMLLHLKPKEYFKADAASREVPAVNF
>Mature_198_residues
MRYSVSRLFVLLVLTVMSGMLSSCGYNAIQQNDESVNKAWGDLESQLQRRSDLIPNLVATVKGAADFEQETLTGVIEARA
KASSVQLTPEMLSDPQAMQQFQSAQGELSGMLSRLMVVVERYPELKANQNFRDLQNQLEGTENRISVARQRYNGAVEVFN
YSIRMFPNSMTNGMLLHLKPKEYFKADAASREVPAVNF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 22221; Mature: 22221

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSVSRLFVLLVLTVMSGMLSSCGYNAIQQNDESVNKAWGDLESQLQRRSDLIPNLVAT
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKGAADFEQETLTGVIEARAKASSVQLTPEMLSDPQAMQQFQSAQGELSGMLSRLMVVVE
HHCCHHHHHHHHHHHHHHHHHHCCCEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RYPELKANQNFRDLQNQLEGTENRISVARQRYNGAVEVFNYSIRMFPNSMTNGMLLHLKP
HCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHEECCCCCCCCEEEEECH
KEYFKADAASREVPAVNF
HHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRYSVSRLFVLLVLTVMSGMLSSCGYNAIQQNDESVNKAWGDLESQLQRRSDLIPNLVAT
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKGAADFEQETLTGVIEARAKASSVQLTPEMLSDPQAMQQFQSAQGELSGMLSRLMVVVE
HHCCHHHHHHHHHHHHHHHHHHCCCEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RYPELKANQNFRDLQNQLEGTENRISVARQRYNGAVEVFNYSIRMFPNSMTNGMLLHLKP
HCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHEECCCCCCCCEEEEECH
KEYFKADAASREVPAVNF
HHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]