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The map label for this gene is nudF [H]

Identifier: 194333608

GI number: 194333608

Start: 824441

End: 824956

Strand: Reverse

Name: nudF [H]

Synonym: Paes_0774

Alternate gene names: 194333608

Gene position: 824956-824441 (Counterclockwise)

Preceding gene: 194333611

Following gene: 194333607

Centisome position: 32.83

GC content: 48.06

Gene sequence:

>516_bases
ATGCATGTCTATACTTACTGTCCTGTCTGCGGCTCACCTCTGACAACGGCGGAAATCGAAAACCGAACAAGGAAACGCTG
TCCTTCCTGCCAATGGATCCACTACGAAAACCCTCTTCCGGTCGCTATCGCCTATACGGTCAACGACCACAATGAACTGC
TCGTCGTCAGAAGAGCTCATCAGCCCGGCTATAACGAATGGGCCCTTCCCGGAGGATTCATTGAAGCCGGTGAAACCCCT
GAAGAGGGCTGCCTGAGAGAATTGCTGGAAGAGACATCACTGACAGGCACTATCGATAACCTTGTCGGCGCATATCATCG
CCATACTGACCTCTACGGTTCGCTGCTGGTTATCGCCTATAAAGTTATTATTACAAGCAATACACTCCGCATCAATCACG
AACTGTTTGAAGCGGATTTTTATCCGCTTGAAGAGATACCGACCATCAATATTCCTCTCCACAAACAAATCATACAGGAA
GCACAATCACATGAACATCTGCGTTCTTTACGATAA

Upstream 100 bases:

>100_bases
TTTCTCTTCAGGAACGCACTGATTGTATTCAGGTAATAATGCTTTATTATCCTTCAATAAGACACAACGACGTGTCACCA
ACAAAAATATTATCCCGGTT

Downstream 100 bases:

>100_bases
TACCGCTCTGAAGCCAGGCCTTGCATCAGGCTGGGGATTTTCCGTTCTCGTCGGCCAGGGAACTCTTTTTGATACTGGCG
AAAACGGCGAGTCACTGCTC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MHVYTYCPVCGSPLTTAEIENRTRKRCPSCQWIHYENPLPVAIAYTVNDHNELLVVRRAHQPGYNEWALPGGFIEAGETP
EEGCLRELLEETSLTGTIDNLVGAYHRHTDLYGSLLVIAYKVIITSNTLRINHELFEADFYPLEEIPTINIPLHKQIIQE
AQSHEHLRSLR

Sequences:

>Translated_171_residues
MHVYTYCPVCGSPLTTAEIENRTRKRCPSCQWIHYENPLPVAIAYTVNDHNELLVVRRAHQPGYNEWALPGGFIEAGETP
EEGCLRELLEETSLTGTIDNLVGAYHRHTDLYGSLLVIAYKVIITSNTLRINHELFEADFYPLEEIPTINIPLHKQIIQE
AQSHEHLRSLR
>Mature_171_residues
MHVYTYCPVCGSPLTTAEIENRTRKRCPSCQWIHYENPLPVAIAYTVNDHNELLVVRRAHQPGYNEWALPGGFIEAGETP
EEGCLRELLEETSLTGTIDNLVGAYHRHTDLYGSLLVIAYKVIITSNTLRINHELFEADFYPLEEIPTINIPLHKQIIQE
AQSHEHLRSLR

Specific function: Involved In The Go System Responsible For Removing An Oxidatively Damaged Form Of Guanine (7,8-Dihydro-8-Oxoguanine) From DNA And The Nucleotide Pool. 8-Oxo-Dgtp Is Inserted Opposite Da And Dc Residues Of Template DNA With Almost Equal Efficiency Thus Le

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 19560; Mature: 19560

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVYTYCPVCGSPLTTAEIENRTRKRCPSCQWIHYENPLPVAIAYTVNDHNELLVVRRAH
CCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEECC
QPGYNEWALPGGFIEAGETPEEGCLRELLEETSLTGTIDNLVGAYHRHTDLYGSLLVIAY
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KVIITSNTLRINHELFEADFYPLEEIPTINIPLHKQIIQEAQSHEHLRSLR
HHHHCCCEEEECHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHVYTYCPVCGSPLTTAEIENRTRKRCPSCQWIHYENPLPVAIAYTVNDHNELLVVRRAH
CCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEECC
QPGYNEWALPGGFIEAGETPEEGCLRELLEETSLTGTIDNLVGAYHRHTDLYGSLLVIAY
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KVIITSNTLRINHELFEADFYPLEEIPTINIPLHKQIIQEAQSHEHLRSLR
HHHHCCCEEEECHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]