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The map label for this gene is csmI [H]

Identifier: 194333599

GI number: 194333599

Start: 813818

End: 814651

Strand: Reverse

Name: csmI [H]

Synonym: Paes_0765

Alternate gene names: 194333599

Gene position: 814651-813818 (Counterclockwise)

Preceding gene: 194333600

Following gene: 194333597

Centisome position: 32.42

GC content: 46.28

Gene sequence:

>834_bases
ATGACAATGTCCCAGAGCCCTGACATCGGGGCACACGTATCAACCTTGATGAAACCGTTCCTGGCCTGCCCCGCCAAAAC
AGGACAAAAAAAGACCGATTTACGCAACTTTCACAAAGCGACGCGCGTTATTGACTATTGTTATTCATCGGAATCTGAAC
AAAAAAACATCATCATGAAGATCAATATAAATAACAGAAGCTACGAGGCAGTTGTTGGAGAACGTCTCATTGATGTGGCC
AGAAAGAATCATACACATATAGGGTATTTCTGTGGAGGAAATGGTTTATGTCAGACCTGTTATGTCAGGGTAAACAAAGG
TATGGATCTTCTTTCACCTTTGAGCGACAGAGAGAAAGCTCTTCTTTCAGATACGCTGATCAAAGAAGGTACCAGAGTGG
CTTGTCTGACGACACTCGATAAACCGGGAACCCTTGAACTGCTTACGACAGTAGAAGAAGTTAAGCGAATGGTTGAATCA
AGACCCCAGGATATCGTTGCCTATCAGGCCAAAATGGGATGGGAAGCGCTTATTAAATTCCCCGATACCGTAACCATGCA
GGCGAGGCGATTTGCGGAGGGAAAACTTGACACCTGGGAACTCGTGACCGACGTTATTACCGCCATTGGAGATGCTATCG
CCCTTACGGTACGAACGTTACAGCACGGCTGGGACCCTTCGGAGCCTGGCAAGACATTTAAGCGACAGTATGCGCATGAG
CACAACCTGGAACAAAATGCTATAGAGCAGGCCTCTCTTACAAAGAAAGAACCTGCTGAAAAGCAAAACCTTCCTGAAGC
GCTCAGGATAGACCAAAAAGCTCCGGTGAATTAA

Upstream 100 bases:

>100_bases
AAATACTTGCCGCATACACGTCCCTGCTGCTACAGCTTCAGCAAATCCCTGAAACACAAGCGACTGAAAACAGTAACCGG
AAAGCCGCAGAGCTTCAACC

Downstream 100 bases:

>100_bases
CACCGGGGCTTTTTGCGGTTTTCTGCAAGATGAAGACTATCTTTGAACCAGCCAAATCCAATGTGCAGTTGGCGCTTTCC
TTATGAAGCAGAGCTGAAGT

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MTMSQSPDIGAHVSTLMKPFLACPAKTGQKKTDLRNFHKATRVIDYCYSSESEQKNIIMKININNRSYEAVVGERLIDVA
RKNHTHIGYFCGGNGLCQTCYVRVNKGMDLLSPLSDREKALLSDTLIKEGTRVACLTTLDKPGTLELLTTVEEVKRMVES
RPQDIVAYQAKMGWEALIKFPDTVTMQARRFAEGKLDTWELVTDVITAIGDAIALTVRTLQHGWDPSEPGKTFKRQYAHE
HNLEQNAIEQASLTKKEPAEKQNLPEALRIDQKAPVN

Sequences:

>Translated_277_residues
MTMSQSPDIGAHVSTLMKPFLACPAKTGQKKTDLRNFHKATRVIDYCYSSESEQKNIIMKININNRSYEAVVGERLIDVA
RKNHTHIGYFCGGNGLCQTCYVRVNKGMDLLSPLSDREKALLSDTLIKEGTRVACLTTLDKPGTLELLTTVEEVKRMVES
RPQDIVAYQAKMGWEALIKFPDTVTMQARRFAEGKLDTWELVTDVITAIGDAIALTVRTLQHGWDPSEPGKTFKRQYAHE
HNLEQNAIEQASLTKKEPAEKQNLPEALRIDQKAPVN
>Mature_276_residues
TMSQSPDIGAHVSTLMKPFLACPAKTGQKKTDLRNFHKATRVIDYCYSSESEQKNIIMKININNRSYEAVVGERLIDVAR
KNHTHIGYFCGGNGLCQTCYVRVNKGMDLLSPLSDREKALLSDTLIKEGTRVACLTTLDKPGTLELLTTVEEVKRMVESR
PQDIVAYQAKMGWEALIKFPDTVTMQARRFAEGKLDTWELVTDVITAIGDAIALTVRTLQHGWDPSEPGKTFKRQYAHEH
NLEQNAIEQASLTKKEPAEKQNLPEALRIDQKAPVN

Specific function: Could play a direct role in the oxidation or reduction of the quenching species formed in the chlorosome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Chlorosome [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 31104; Mature: 30973

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSQSPDIGAHVSTLMKPFLACPAKTGQKKTDLRNFHKATRVIDYCYSSESEQKNIIMK
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
ININNRSYEAVVGERLIDVARKNHTHIGYFCGGNGLCQTCYVRVNKGMDLLSPLSDREKA
EEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCHHHCCCCHHHHH
LLSDTLIKEGTRVACLTTLDKPGTLELLTTVEEVKRMVESRPQDIVAYQAKMGWEALIKF
HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCC
PDTVTMQARRFAEGKLDTWELVTDVITAIGDAIALTVRTLQHGWDPSEPGKTFKRQYAHE
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
HNLEQNAIEQASLTKKEPAEKQNLPEALRIDQKAPVN
CCCHHHHHHHHHCCCCCCHHHHCCCHHHHCCCCCCCC
>Mature Secondary Structure 
TMSQSPDIGAHVSTLMKPFLACPAKTGQKKTDLRNFHKATRVIDYCYSSESEQKNIIMK
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
ININNRSYEAVVGERLIDVARKNHTHIGYFCGGNGLCQTCYVRVNKGMDLLSPLSDREKA
EEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCHHHCCCCHHHHH
LLSDTLIKEGTRVACLTTLDKPGTLELLTTVEEVKRMVESRPQDIVAYQAKMGWEALIKF
HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCC
PDTVTMQARRFAEGKLDTWELVTDVITAIGDAIALTVRTLQHGWDPSEPGKTFKRQYAHE
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
HNLEQNAIEQASLTKKEPAEKQNLPEALRIDQKAPVN
CCCHHHHHHHHHCCCCCCHHHHCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11148041; 12093901 [H]