Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194333495
Identifier: 194333495
GI number: 194333495
Start: 696783
End: 697328
Strand: Reverse
Name: 194333495
Synonym: Paes_0660
Alternate gene names: NA
Gene position: 697328-696783 (Counterclockwise)
Preceding gene: 194333496
Following gene: 194333494
Centisome position: 27.75
GC content: 55.68
Gene sequence:
>546_bases TTGAAAAACAGCGAAAAAAACACCCGGCAGACCTATCGACTGAACATCACCAGGAACTGGGATGGAACCCCGGCCTCCCC GAACGACATCTGTGAGATTGTTTTTTCGCTAAAAGCTGACGAAATTGTCGTAAATGTAGAGGCCCCTTTTTATGATGATC CACCACCATCCGGACCTGCCGGAGAAAAAGAAGGTCTCTGGAACTTCGAAGTCGTAGAGCTCTTTCTGCTCGGCAGAGGC GGCCGATACCTGGAAATTGAAATAGGGCCTCACGGTCACTCTCTCATCCTTGCTCTCCACTCAGTCCGCCGGGTGAGCGG CAGGCATACCCCGCTTCACTGCGCCACCCGGATCAACGGCAATCGCTGGCAGGGAGTACTGACGCTGTCCCCGGAAGCCG AATTACTGCCCTTCACCCACGCCAACGCGTATGCAATACACGGCCAGGAGCCAAACCGTCGGTATCTCGCCGCATCACCT GTCCCGGGAGAACGTCCCGATTTCCACCAACCGGCCCGGTTCATAGCGCTGAAAGACCTGCAGTAA
Upstream 100 bases:
>100_bases TGCTCATGCTTGGCAAAGACCGCCTTTGAAAGATCAGGAACTCCATTGTCCGGCAAAGGCTGACAGGAACGGAAAAAACC GCAAAGAGTGTGAGGCTGGA
Downstream 100 bases:
>100_bases TCACTGCGGTGACAAAGCAATCTCCCTCACGAGTGGGGCCCCCCCACCGGCCTGATTCCATTTTTCACGCACTGTTTCAG ATCCAGGTATGTCACCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKNSEKNTRQTYRLNITRNWDGTPASPNDICEIVFSLKADEIVVNVEAPFYDDPPPSGPAGEKEGLWNFEVVELFLLGRG GRYLEIEIGPHGHSLILALHSVRRVSGRHTPLHCATRINGNRWQGVLTLSPEAELLPFTHANAYAIHGQEPNRRYLAASP VPGERPDFHQPARFIALKDLQ
Sequences:
>Translated_181_residues MKNSEKNTRQTYRLNITRNWDGTPASPNDICEIVFSLKADEIVVNVEAPFYDDPPPSGPAGEKEGLWNFEVVELFLLGRG GRYLEIEIGPHGHSLILALHSVRRVSGRHTPLHCATRINGNRWQGVLTLSPEAELLPFTHANAYAIHGQEPNRRYLAASP VPGERPDFHQPARFIALKDLQ >Mature_181_residues MKNSEKNTRQTYRLNITRNWDGTPASPNDICEIVFSLKADEIVVNVEAPFYDDPPPSGPAGEKEGLWNFEVVELFLLGRG GRYLEIEIGPHGHSLILALHSVRRVSGRHTPLHCATRINGNRWQGVLTLSPEAELLPFTHANAYAIHGQEPNRRYLAASP VPGERPDFHQPARFIALKDLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI153251902, Length=166, Percent_Identity=35.5421686746988, Blast_Score=87, Evalue=8e-18, Organism=Homo sapiens, GI153251889, Length=166, Percent_Identity=35.5421686746988, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI133930846, Length=187, Percent_Identity=35.2941176470588, Blast_Score=103, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20294; Mature: 20294
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSEKNTRQTYRLNITRNWDGTPASPNDICEIVFSLKADEIVVNVEAPFYDDPPPSGPA CCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCC GEKEGLWNFEVVELFLLGRGGRYLEIEIGPHGHSLILALHSVRRVSGRHTPLHCATRING CCCCCCCCHHEEEEEEECCCCCEEEEEECCCCCEEHHHHHHHHHHCCCCCCEEEEEEECC NRWQGVLTLSPEAELLPFTHANAYAIHGQEPNRRYLAASPVPGERPDFHQPARFIALKDL CEEEEEEEECCCCCEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEEECC Q C >Mature Secondary Structure MKNSEKNTRQTYRLNITRNWDGTPASPNDICEIVFSLKADEIVVNVEAPFYDDPPPSGPA CCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCC GEKEGLWNFEVVELFLLGRGGRYLEIEIGPHGHSLILALHSVRRVSGRHTPLHCATRING CCCCCCCCHHEEEEEEECCCCCEEEEEECCCCCEEHHHHHHHHHHCCCCCCEEEEEEECC NRWQGVLTLSPEAELLPFTHANAYAIHGQEPNRRYLAASPVPGERPDFHQPARFIALKDL CEEEEEEEECCCCCEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEEECC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA