Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
---|---|
Accession | NC_011059 |
Length | 2,512,923 |
Click here to switch to the map view.
The map label for this gene is 194333484
Identifier: 194333484
GI number: 194333484
Start: 684979
End: 685464
Strand: Reverse
Name: 194333484
Synonym: Paes_0646
Alternate gene names: NA
Gene position: 685464-684979 (Counterclockwise)
Preceding gene: 194333486
Following gene: 194333483
Centisome position: 27.28
GC content: 48.35
Gene sequence:
>486_bases ATGGGTTATTCGCACGCCGTGAGACACAGTATTCTGAAAAAAGTGCTGCCGCCTGAGAGCAGGAACATAGCAGAAGTCAG CCGGGAAACCGGAATCAACCATCAAACGATCAGGAATTGGATCAAGCAAGCTGAATCAGGTATCTTGGCAGATGGAACAC AAGACAGTTGTCCCCGTTTCCTGACACCCAAGGAGAAATACGAGTTGGTTGTCGAGGCCGCCGGCATCGATGATGAACAG CTCGGTGAGTTTCTCAGGGAACGAGGGCTGCATACAGAACATCTCACCATCTGGGATCAAGAACTTCGAGACATGGTTGA CAAGAAAAGCGAACAGCAAGACAAAGAAAATAAAGAGCTTAAGAAGAAAGTCAGAGAGCTTGAAAAGGAGCTCCAACGCA AGGAAAAAGCCCTTGCCGAAGCAGCCGCCCTGCTTGTTCTAAAAAAAAAGTTAAGCGCCCTTACCAAGGAGAACGAGGAC GATTGA
Upstream 100 bases:
>100_bases ATAAAAAAAGCCCTCACCCCTATGTGTTAATATAGATGGCGCATCCTAATGGAGCCCCTATGTGTTAATATAGATGTCGC GCCTAAAGAGGAGACATCAA
Downstream 100 bases:
>100_bases TCCTGGAAGCCCATAAGGCTGAAGTCATTATGCTGATAGAAGAAGCACATGGAAACGGAGCCCGTTACAGCAAGGCCTGT GAGGTTGTTGGGATCTCTCA
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MGYSHAVRHSILKKVLPPESRNIAEVSRETGINHQTIRNWIKQAESGILADGTQDSCPRFLTPKEKYELVVEAAGIDDEQ LGEFLRERGLHTEHLTIWDQELRDMVDKKSEQQDKENKELKKKVRELEKELQRKEKALAEAAALLVLKKKLSALTKENED D
Sequences:
>Translated_161_residues MGYSHAVRHSILKKVLPPESRNIAEVSRETGINHQTIRNWIKQAESGILADGTQDSCPRFLTPKEKYELVVEAAGIDDEQ LGEFLRERGLHTEHLTIWDQELRDMVDKKSEQQDKENKELKKKVRELEKELQRKEKALAEAAALLVLKKKLSALTKENED D >Mature_160_residues GYSHAVRHSILKKVLPPESRNIAEVSRETGINHQTIRNWIKQAESGILADGTQDSCPRFLTPKEKYELVVEAAGIDDEQL GEFLRERGLHTEHLTIWDQELRDMVDKKSEQQDKENKELKKKVRELEKELQRKEKALAEAAALLVLKKKLSALTKENEDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18540; Mature: 18409
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYSHAVRHSILKKVLPPESRNIAEVSRETGINHQTIRNWIKQAESGILADGTQDSCPRF CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC LTPKEKYELVVEAAGIDDEQLGEFLRERGLHTEHLTIWDQELRDMVDKKSEQQDKENKEL CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKKVRELEKELQRKEKALAEAAALLVLKKKLSALTKENEDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GYSHAVRHSILKKVLPPESRNIAEVSRETGINHQTIRNWIKQAESGILADGTQDSCPRF CHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC LTPKEKYELVVEAAGIDDEQLGEFLRERGLHTEHLTIWDQELRDMVDKKSEQQDKENKEL CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKKVRELEKELQRKEKALAEAAALLVLKKKLSALTKENEDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA