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The map label for this gene is tonB [H]

Identifier: 194333402

GI number: 194333402

Start: 602368

End: 603030

Strand: Reverse

Name: tonB [H]

Synonym: Paes_0559

Alternate gene names: 194333402

Gene position: 603030-602368 (Counterclockwise)

Preceding gene: 194333403

Following gene: 194333401

Centisome position: 24.0

GC content: 49.92

Gene sequence:

>663_bases
ATGCACAATAGAACGCTCACGAGCCTGTGCTTCATAGGCGCACTCACCCTCCATGTCCTGCCATTATTCAGCATGCCCGA
TAAAGAGGTAAAGCAGTCAGTCCCTACCGTGCCCCTAAGCGTAACACTTGCCCGGATAAGTCAAACCGATTGCCAACCCG
CACGCTCCCGGCAAGCTGACCAAACAACTCATCAACAAGAGAACAGAGAATCAAAAGCGGTTCCTGAAAAAGTGCGCCAA
AAAAAAGCAGCACCTCCAGAGAAAACCATCAGAACACCACGTCAAGAGCCACGTCAAGAGCAACATGACGACCACGACGC
TCACGCAAGTGTTGAGCAAAGCGCAAAAACATCTCAGAAAGAACAAGCATCCAGCCACGCTCATGACCTCTTTCTTTCAA
AGATCCGATCCCGTATTGAACACCAGAAATACTACCCAAGAATGGCAAAGAGGCTCAGTCATGAAGGGGTTGTTCATCTT
AAACTCGTCATCGCAGCAAACGGCTCGATAGCCGAATTGAAGCTGCTGATGTCATCAGGATACAGCTCGCTTGATAACGC
AGCTCTGGAGGCCGTAAAAAAAGCCGCACCCTTTCCCGATCCGCAAGGCTACGACCGCAAGGATATCGCACTCACCATCC
CGTTGAGTTATTCTCTCTATTAG

Upstream 100 bases:

>100_bases
GATCAAAACATCAGCTTCGGCCGATTCCTCTCCATTATGGACAAAACACGCTTATGCGGCATCAACAACGTGTCGATCGC
TACCATCAGACCGGGGGAAC

Downstream 100 bases:

>100_bases
CTGTAAAGAGACAATGTTCTTGCAGATCACGAAAAAAATTTGAGTCTGATCTGCAAGAAATTATATTTGATCTAAATAAA
ATTAAATCACAAAAAAAATG

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MHNRTLTSLCFIGALTLHVLPLFSMPDKEVKQSVPTVPLSVTLARISQTDCQPARSRQADQTTHQQENRESKAVPEKVRQ
KKAAPPEKTIRTPRQEPRQEQHDDHDAHASVEQSAKTSQKEQASSHAHDLFLSKIRSRIEHQKYYPRMAKRLSHEGVVHL
KLVIAANGSIAELKLLMSSGYSSLDNAALEAVKKAAPFPDPQGYDRKDIALTIPLSYSLY

Sequences:

>Translated_220_residues
MHNRTLTSLCFIGALTLHVLPLFSMPDKEVKQSVPTVPLSVTLARISQTDCQPARSRQADQTTHQQENRESKAVPEKVRQ
KKAAPPEKTIRTPRQEPRQEQHDDHDAHASVEQSAKTSQKEQASSHAHDLFLSKIRSRIEHQKYYPRMAKRLSHEGVVHL
KLVIAANGSIAELKLLMSSGYSSLDNAALEAVKKAAPFPDPQGYDRKDIALTIPLSYSLY
>Mature_220_residues
MHNRTLTSLCFIGALTLHVLPLFSMPDKEVKQSVPTVPLSVTLARISQTDCQPARSRQADQTTHQQENRESKAVPEKVRQ
KKAAPPEKTIRTPRQEPRQEQHDDHDAHASVEQSAKTSQKEQASSHAHDLFLSKIRSRIEHQKYYPRMAKRLSHEGVVHL
KLVIAANGSIAELKLLMSSGYSSLDNAALEAVKKAAPFPDPQGYDRKDIALTIPLSYSLY

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 24661; Mature: 24661

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNRTLTSLCFIGALTLHVLPLFSMPDKEVKQSVPTVPLSVTLARISQTDCQPARSRQAD
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH
QTTHQQENRESKAVPEKVRQKKAAPPEKTIRTPRQEPRQEQHDDHDAHASVEQSAKTSQK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
EQASSHAHDLFLSKIRSRIEHQKYYPRMAKRLSHEGVVHLKLVIAANGSIAELKLLMSSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCC
YSSLDNAALEAVKKAAPFPDPQGYDRKDIALTIPLSYSLY
CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MHNRTLTSLCFIGALTLHVLPLFSMPDKEVKQSVPTVPLSVTLARISQTDCQPARSRQAD
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH
QTTHQQENRESKAVPEKVRQKKAAPPEKTIRTPRQEPRQEQHDDHDAHASVEQSAKTSQK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
EQASSHAHDLFLSKIRSRIEHQKYYPRMAKRLSHEGVVHLKLVIAANGSIAELKLLMSSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCC
YSSLDNAALEAVKKAAPFPDPQGYDRKDIALTIPLSYSLY
CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]