Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194333144
Identifier: 194333144
GI number: 194333144
Start: 318972
End: 319430
Strand: Reverse
Name: 194333144
Synonym: Paes_0300
Alternate gene names: NA
Gene position: 319430-318972 (Counterclockwise)
Preceding gene: 194333158
Following gene: 194333142
Centisome position: 12.71
GC content: 50.54
Gene sequence:
>459_bases ATGAAAAAATTTCTTCTCCCCTTTCTCATCGGGCTGTTATCAGCCACCCCTGTATCAGCGCACTCGTCCGATGCTGAAAC AACAGTAGACGTCATCGCCAAAACAACAAAAAGCTGGAATGGCAAGCAGCTTCCGAGCTACCTTTCGGGAACTCCGGAGA TCACCATTTTAAGAATCACCATCCCACCGGGCATCTCACTTCCGCTCCATATCCATCCGGTGATCAATGCTGGTGTCATG ATGCAGGGGGCACTCACCGTGTTCACTGAAGATGAACAGATTCTTCATCTGAAGGCCGGAGATCCGATTGTCGAAGTAGT CGACACATGGCACTATGGAAAAAACGAAGGGAGTGAACCAGTGGTGCTTATAATGTTCTACGCCGGCAGAGAAGGAACCC CGATCACCGTCGTCGATACGTTATCGGCCGATGCTTCCGCCAAGTACCAGGAAGAGTGA
Upstream 100 bases:
>100_bases TTTTACTCTTGTAGCGCAACTTTCGCCGTCCCCCAGGATGTAATAATTCATACTACCCGACAACCCATCAGCAAGGCTGC TGAAGCGAGCCCTGTAGACC
Downstream 100 bases:
>100_bases CAGGGTTGATAGTCGATACGCGATCATTCAGTTGCTCCTGGTTGCCAGAATCACGTATTCACGACAGCCTCTCTCCAGAA GGTTATTTGCATAAAAACTC
Product: Cupin 2 barrel domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; Cupin Domain-Containing Protein; Cupin Domain Protein; Lipoprotein
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MKKFLLPFLIGLLSATPVSAHSSDAETTVDVIAKTTKSWNGKQLPSYLSGTPEITILRITIPPGISLPLHIHPVINAGVM MQGALTVFTEDEQILHLKAGDPIVEVVDTWHYGKNEGSEPVVLIMFYAGREGTPITVVDTLSADASAKYQEE
Sequences:
>Translated_152_residues MKKFLLPFLIGLLSATPVSAHSSDAETTVDVIAKTTKSWNGKQLPSYLSGTPEITILRITIPPGISLPLHIHPVINAGVM MQGALTVFTEDEQILHLKAGDPIVEVVDTWHYGKNEGSEPVVLIMFYAGREGTPITVVDTLSADASAKYQEE >Mature_152_residues MKKFLLPFLIGLLSATPVSAHSSDAETTVDVIAKTTKSWNGKQLPSYLSGTPEITILRITIPPGISLPLHIHPVINAGVM MQGALTVFTEDEQILHLKAGDPIVEVVDTWHYGKNEGSEPVVLIMFYAGREGTPITVVDTLSADASAKYQEE
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16440; Mature: 16440
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFLLPFLIGLLSATPVSAHSSDAETTVDVIAKTTKSWNGKQLPSYLSGTPEITILRIT CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEEE IPPGISLPLHIHPVINAGVMMQGALTVFTEDEQILHLKAGDPIVEVVDTWHYGKNEGSEP CCCCCCCCEEEEECCCCCEEEECEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCC VVLIMFYAGREGTPITVVDTLSADASAKYQEE EEEEEEECCCCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure MKKFLLPFLIGLLSATPVSAHSSDAETTVDVIAKTTKSWNGKQLPSYLSGTPEITILRIT CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEEE IPPGISLPLHIHPVINAGVMMQGALTVFTEDEQILHLKAGDPIVEVVDTWHYGKNEGSEP CCCCCCCCEEEEECCCCCEEEECEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCC VVLIMFYAGREGTPITVVDTLSADASAKYQEE EEEEEEECCCCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA