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The map label for this gene is yebA [C]

Identifier: 194333051

GI number: 194333051

Start: 214194

End: 215051

Strand: Reverse

Name: yebA [C]

Synonym: Paes_0207

Alternate gene names: 194333051

Gene position: 215051-214194 (Counterclockwise)

Preceding gene: 194333052

Following gene: 194333042

Centisome position: 8.56

GC content: 54.43

Gene sequence:

>858_bases
ATGAGACAGCGTCGTCCCGGATTCATTGCAGTCTGCATCACCCTGATGCTTCTCCTCTCAAACACAATCCCGCTCCAGGC
CGCATCACCCGATCTGCAGCTCGACAGTACGAAAAAGCAGCAGGGCAATTTTTTCATCGCCACCGTCTCCGGCCTCCAGA
AAGCCCCGAGGCTCTGGTTCAACGGCTCAAGCTACCATATGTTCCTCCAGAATGACGGCACCTTCAGAGCGCTGATTCCT
GTCGATGTCATGCTGACTCCGGGTAAGTATGCCATACTGGCGATCAATGAATCGTGGAAGGAAAAAATACCGGTAGAAGT
CAGCTCCAACGGGCTTTCAGTCCAGAAAGTCTGGCTTGATAAAAAAACCTCGGGCCTCAGAGCGACACAAGAAGAAAAAG
CACAGGTCAAAACAGCCCTGCATAGACTCACAGATCAGAAACAATGGTCGGGCCTCTTCCTGATGCCAGCCACAGGCCGT
AAAAGCAGCCCCTTCGGCGTCAAGCGCTCATACAACGGCGCTCCTGTCTCCAGCTACCATAAAGGCATCGACATCGCCGC
CCCGCAGGGAACCATCGTCAAAAGCCCGGCCGACGGCAAGGTCATCCTCACCGGCTACGAATCAAACCGATTCCACGTCC
ACGGCAACACCGTCATCATCGACCACGGCCAGGGACTCACCTCCGTCTACCTTCACCTCAATGAGATCAAAGTCAACACT
GGTGACATCGTTAAAAAAGGCGACCCAATAGCCACTATCGGCAGTACCGGCATCTCCACCGGACCCCACCTGCACTGGGG
CGTCTACCTCTATGGCACGAGCGTCAATCCGGAGCTCTTTGTAAGGAATGAGTATTGA

Upstream 100 bases:

>100_bases
CTTTTTTCAGTTATGGAATTGTTGAGATCCGAAATACATTACTAACAGTAGATAACCCGAAATCGCAGCCACACTAAAAG
CTGCACAGCAACAGAGCACT

Downstream 100 bases:

>100_bases
AAAGCAGCCGTCCTGAATCGTTTGCCCACAGATGTCACCGATCGGCACTGACGATAAGATAAATCAGACATATCGGGGAC
GGATGCCATCGATCACCCGG

Product: peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MRQRRPGFIAVCITLMLLLSNTIPLQAASPDLQLDSTKKQQGNFFIATVSGLQKAPRLWFNGSSYHMFLQNDGTFRALIP
VDVMLTPGKYAILAINESWKEKIPVEVSSNGLSVQKVWLDKKTSGLRATQEEKAQVKTALHRLTDQKQWSGLFLMPATGR
KSSPFGVKRSYNGAPVSSYHKGIDIAAPQGTIVKSPADGKVILTGYESNRFHVHGNTVIIDHGQGLTSVYLHLNEIKVNT
GDIVKKGDPIATIGSTGISTGPHLHWGVYLYGTSVNPELFVRNEY

Sequences:

>Translated_285_residues
MRQRRPGFIAVCITLMLLLSNTIPLQAASPDLQLDSTKKQQGNFFIATVSGLQKAPRLWFNGSSYHMFLQNDGTFRALIP
VDVMLTPGKYAILAINESWKEKIPVEVSSNGLSVQKVWLDKKTSGLRATQEEKAQVKTALHRLTDQKQWSGLFLMPATGR
KSSPFGVKRSYNGAPVSSYHKGIDIAAPQGTIVKSPADGKVILTGYESNRFHVHGNTVIIDHGQGLTSVYLHLNEIKVNT
GDIVKKGDPIATIGSTGISTGPHLHWGVYLYGTSVNPELFVRNEY
>Mature_285_residues
MRQRRPGFIAVCITLMLLLSNTIPLQAASPDLQLDSTKKQQGNFFIATVSGLQKAPRLWFNGSSYHMFLQNDGTFRALIP
VDVMLTPGKYAILAINESWKEKIPVEVSSNGLSVQKVWLDKKTSGLRATQEEKAQVKTALHRLTDQKQWSGLFLMPATGR
KSSPFGVKRSYNGAPVSSYHKGIDIAAPQGTIVKSPADGKVILTGYESNRFHVHGNTVIIDHGQGLTSVYLHLNEIKVNT
GDIVKKGDPIATIGSTGISTGPHLHWGVYLYGTSVNPELFVRNEY

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=118, Percent_Identity=43.2203389830509, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI87082297, Length=98, Percent_Identity=37.7551020408163, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI87082174, Length=136, Percent_Identity=32.3529411764706, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1789099, Length=102, Percent_Identity=39.2156862745098, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 31330; Mature: 31330

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQRRPGFIAVCITLMLLLSNTIPLQAASPDLQLDSTKKQQGNFFIATVSGLQKAPRLWF
CCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCCEEEEEECCCCCCCEEEE
NGSSYHMFLQNDGTFRALIPVDVMLTPGKYAILAINESWKEKIPVEVSSNGLSVQKVWLD
CCCEEEEEEECCCCEEEEEEEEEEECCCCEEEEEECCCHHHCCCEEECCCCCEEEEEEEC
KKTSGLRATQEEKAQVKTALHRLTDQKQWSGLFLMPATGRKSSPFGVKRSYNGAPVSSYH
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHCCEEEEECCCCCCCCCCCEECCCCCCCHHHH
KGIDIAAPQGTIVKSPADGKVILTGYESNRFHVHGNTVIIDHGQGLTSVYLHLNEIKVNT
CCEEEECCCCCEEECCCCCEEEEEEECCCEEEEECCEEEEECCCCCEEEEEEEEEEEECC
GDIVKKGDPIATIGSTGISTGPHLHWGVYLYGTSVNPELFVRNEY
CCEEECCCCEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEECC
>Mature Secondary Structure
MRQRRPGFIAVCITLMLLLSNTIPLQAASPDLQLDSTKKQQGNFFIATVSGLQKAPRLWF
CCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCCEEEEEECCCCCCCEEEE
NGSSYHMFLQNDGTFRALIPVDVMLTPGKYAILAINESWKEKIPVEVSSNGLSVQKVWLD
CCCEEEEEEECCCCEEEEEEEEEEECCCCEEEEEECCCHHHCCCEEECCCCCEEEEEEEC
KKTSGLRATQEEKAQVKTALHRLTDQKQWSGLFLMPATGRKSSPFGVKRSYNGAPVSSYH
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHCCEEEEECCCCCCCCCCCEECCCCCCCHHHH
KGIDIAAPQGTIVKSPADGKVILTGYESNRFHVHGNTVIIDHGQGLTSVYLHLNEIKVNT
CCEEEECCCCCEEECCCCCEEEEEEECCCEEEEECCEEEEECCCCCEEEEEEEEEEEECC
GDIVKKGDPIATIGSTGISTGPHLHWGVYLYGTSVNPELFVRNEY
CCEEECCCCEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]