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The map label for this gene is lpsE [H]

Identifier: 193213442

GI number: 193213442

Start: 1973918

End: 1974985

Strand: Direct

Name: lpsE [H]

Synonym: Cpar_1803

Alternate gene names: 193213442

Gene position: 1973918-1974985 (Clockwise)

Preceding gene: 193213441

Following gene: 193213443

Centisome position: 86.23

GC content: 56.09

Gene sequence:

>1068_bases
ATGAACATTCTCTTTATCAACTCGGCAAGAACCTGGGGAGGAACCGAGAAATGGACCTCCATGGCAGCTCATGCTCTTGC
TGAAAGCGAGAATACTTTTCTGGTTTACCGCCGGGAAATCGTAGGAGAGCGCTTCACGATCCCGAAATTTCAACTGCCAT
GCCTGAGCCATGTCGATCCGTACACGATCATGCAGGTCATCAGAATCATCCGGCAACACCGCATCGATGTCGTCATCCCG
ACCAAACGCAAGGATTATATGATTGCCGGTATCGCATCGAAAGTGTGCGGCATCACGAACATCCTCCGACTCGGAATCGA
CCGGACGCCGACGAGCTTCTGGTTTCACCGGCTCATGTACGGCACCCTCGCGGATGGCATCATCGTGAACGCCCGCAGAA
TCAAGGAAAGTCTCTCAAAGGCGACCTGGCTTGATTCCGACAAAATCAGAGTCATCTACAACGGAATCGATACAACCGCT
ATCGACCGACAGTTCCCGGACGGACTGCCCGACAAACCGACAGGATTCACGGTGTGCTCGATGGGCATTCTGACCCGGCG
CAAGGGATTTGATTTTCTGATGGAGGGCTTTGCGCGATTCCTTGAACGTTCCGGAGCACAGGACGCGGAGCTCGTCATCA
TCGGCAGCGGGCCTGAACAGGCCGCCCTCGAAGCCCTTGCCGACGAACTCGGCATTTCCGGCATCACCAGATTCACGGGA
TTTCTCCGCAATCCCCTGTCCGAGCTGGCCCGCAGCCATCTGTTCGCGATGGTCTCGAAAAACGAGGGCATTGCCAACGC
GCTGCTCGAAGGCATGTACCTCGGCAACGCCCCGGTCAGCACCAGAGCCGGCGGTTCAGAAGAAGCCATCGATCACGGCG
TCAACGGCTATCTGCTCGACTACGGAGACGTCGAGACACTGGCCGACACCCTTGTAGAGCTGTATCAATCACCGCAGCTC
CGGGAAACCATCGCACGGCGGGCCAGAGAACGGGTCATCAAGCAGTTTGCATTGGAGCGGATGAGCCGTGAAGTCATCGA
TTTCTGCAAGTCGCGACAAAAAAGGTAA

Upstream 100 bases:

>100_bases
ACACCGGTTCAGGAGGGCATCAACCGCTTCGTTGCCTGGTACCGTGAATTCTTCAACGTCTGAGGCGCTGGAGATGGGCA
TCGACGGCCGACTGTAAACC

Downstream 100 bases:

>100_bases
GCCGATATTTTTGTAGATTGGCTTCACATGTTGTCATCTCCAACCACAACCCCAGACCCAACAGCAGCAGCACACCTGCT
CCGGACGCATGAATTTTCTC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNILFINSARTWGGTEKWTSMAAHALAESENTFLVYRREIVGERFTIPKFQLPCLSHVDPYTIMQVIRIIRQHRIDVVIP
TKRKDYMIAGIASKVCGITNILRLGIDRTPTSFWFHRLMYGTLADGIIVNARRIKESLSKATWLDSDKIRVIYNGIDTTA
IDRQFPDGLPDKPTGFTVCSMGILTRRKGFDFLMEGFARFLERSGAQDAELVIIGSGPEQAALEALADELGISGITRFTG
FLRNPLSELARSHLFAMVSKNEGIANALLEGMYLGNAPVSTRAGGSEEAIDHGVNGYLLDYGDVETLADTLVELYQSPQL
RETIARRARERVIKQFALERMSREVIDFCKSRQKR

Sequences:

>Translated_355_residues
MNILFINSARTWGGTEKWTSMAAHALAESENTFLVYRREIVGERFTIPKFQLPCLSHVDPYTIMQVIRIIRQHRIDVVIP
TKRKDYMIAGIASKVCGITNILRLGIDRTPTSFWFHRLMYGTLADGIIVNARRIKESLSKATWLDSDKIRVIYNGIDTTA
IDRQFPDGLPDKPTGFTVCSMGILTRRKGFDFLMEGFARFLERSGAQDAELVIIGSGPEQAALEALADELGISGITRFTG
FLRNPLSELARSHLFAMVSKNEGIANALLEGMYLGNAPVSTRAGGSEEAIDHGVNGYLLDYGDVETLADTLVELYQSPQL
RETIARRARERVIKQFALERMSREVIDFCKSRQKR
>Mature_355_residues
MNILFINSARTWGGTEKWTSMAAHALAESENTFLVYRREIVGERFTIPKFQLPCLSHVDPYTIMQVIRIIRQHRIDVVIP
TKRKDYMIAGIASKVCGITNILRLGIDRTPTSFWFHRLMYGTLADGIIVNARRIKESLSKATWLDSDKIRVIYNGIDTTA
IDRQFPDGLPDKPTGFTVCSMGILTRRKGFDFLMEGFARFLERSGAQDAELVIIGSGPEQAALEALADELGISGITRFTG
FLRNPLSELARSHLFAMVSKNEGIANALLEGMYLGNAPVSTRAGGSEEAIDHGVNGYLLDYGDVETLADTLVELYQSPQL
RETIARRARERVIKQFALERMSREVIDFCKSRQKR

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI14861836, Length=261, Percent_Identity=25.6704980842912, Blast_Score=75, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39885; Mature: 39885

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILFINSARTWGGTEKWTSMAAHALAESENTFLVYRREIVGERFTIPKFQLPCLSHVDP
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCCHHCCCCH
YTIMQVIRIIRQHRIDVVIPTKRKDYMIAGIASKVCGITNILRLGIDRTPTSFWFHRLMY
HHHHHHHHHHHHCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GTLADGIIVNARRIKESLSKATWLDSDKIRVIYNGIDTTAIDRQFPDGLPDKPTGFTVCS
HHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCHHHHH
MGILTRRKGFDFLMEGFARFLERSGAQDAELVIIGSGPEQAALEALADELGISGITRFTG
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHH
FLRNPLSELARSHLFAMVSKNEGIANALLEGMYLGNAPVSTRAGGSEEAIDHGVNGYLLD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEC
YGDVETLADTLVELYQSPQLRETIARRARERVIKQFALERMSREVIDFCKSRQKR
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNILFINSARTWGGTEKWTSMAAHALAESENTFLVYRREIVGERFTIPKFQLPCLSHVDP
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCCHHCCCCH
YTIMQVIRIIRQHRIDVVIPTKRKDYMIAGIASKVCGITNILRLGIDRTPTSFWFHRLMY
HHHHHHHHHHHHCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GTLADGIIVNARRIKESLSKATWLDSDKIRVIYNGIDTTAIDRQFPDGLPDKPTGFTVCS
HHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCHHHHH
MGILTRRKGFDFLMEGFARFLERSGAQDAELVIIGSGPEQAALEALADELGISGITRFTG
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHH
FLRNPLSELARSHLFAMVSKNEGIANALLEGMYLGNAPVSTRAGGSEEAIDHGVNGYLLD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEC
YGDVETLADTLVELYQSPQLRETIARRARERVIKQFALERMSREVIDFCKSRQKR
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]