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The map label for this gene is 193213334

Identifier: 193213334

GI number: 193213334

Start: 1854636

End: 1856087

Strand: Direct

Name: 193213334

Synonym: Cpar_1694

Alternate gene names: NA

Gene position: 1854636-1856087 (Clockwise)

Preceding gene: 193213326

Following gene: 193213335

Centisome position: 81.02

GC content: 57.85

Gene sequence:

>1452_bases
ATGTTTCCTCTTGTTTACGAAATCAATACGCGCGTCTGGCTGAGAGAGCTTTCGATCAGGCATGGGCAGACAATCACGCT
TGCCAATGTGCCCGACGAGGAGCTGGAGCTGCTTCGCTGCGGCCGTTTCACCTTTGTGTGGCTGATGGGAGTCTGGAAAC
GAAGCTGCTACAGCGCGGCAATCGCAGCTTCGCACAAGGGGCTCCGCTCGGAGCTGCTCGATTACCTCCAGGACTTGCAG
CCTGAGGACATCGTCGCCTCGCCGTATGCCGTTGCCGACTACAAGGTCAGCGAAATGCTCGGCGGCGAAGAGGGTTTGCT
CGTCTTCCGCGAGCGGCTAAAAAGCATGAACATCAAGCTCATGCTCGATTTCGTGCCGAACCACATGGCGCTCGACAACC
GCTGGCTGCCCGAGCATCCCGAACTGTTCGTTTCGATGACGGAGGACGATCCGGAAGATGCCTGTTTCGAGTTCACCAAA
GGCCAATTCCTCGCTCACGGCAAGGATCCCTACTTCCCCCCGTGGAGCGACACCCTGCAGCTCAACTACGCCAATCCCGC
CACACACGACATGATGATCCACAACCTGTTGCACGTCAGTGATCTGTGCGACGGCGTGCGGTGCGACATGGCGATGCTGC
TGATCAAAGAGGTGTTCGACACTACCTGGGGAAGCCAGTACGGCGAAATGCCCGGAGAGTTCTGGCCGACCGCGATCCGG
CATATTCGCGAAAAGCATCCCGACTTCATCTTTCTGGCAGAAGCCTACTGGCACAAGGAGTGGGCGCTGCAGCAGATGGG
GTTCGACTTCACGTACGACAAGAACTTTTATGACTTCCTCGGCAGCTTTCCGGTCAACATCCTGAAACTTCGGGATCACC
TGCTGTGCGACCCGGAATACCAGGCGCGCCTGTGCCGCTTCATCGAAAACCACGACGAGGATCGTGCATCCGAATGGTTC
GGCAAGAACCACGCGGTCGCAGCGCTGGTGCTGCTCACCTCGCCGGGCATGACGCTGATCCATCAGGGCCAGCTCGAAGG
CCTGGTCAGGAAAATCCCGGTCCAGATCATCAGAAGTGCTGAAGAGAAAGGGCATGAAAAGCTCCTGCCGCTCTACCTCA
AACTCTTCGAACTCAGGCTCGATCCGGTTTTTCAGGAGAAGGGACGCACCGAATGGCTCAACCTGAACGCGGCTGATCTC
TCGCTCTGTTTCGGCTACTGCCGTTCGACTTCCGACTCGCACGCATTCGTGCTCGCCAACTTCTCAAGCCACGGAATCGA
TATCGAATTCACCCATCCGGCGCTGGATGGCCTCGACAAAAGCTCCATCACAGCCTACTCGACCCGCTTCCCGGAACCGC
TCCAGGAGTGGCAACTGAACGACAACGCCACCGGCCTCCACCTCAAGCAGAACGAAGGCGTCCTGCTCATGGTGAAAAAG
CCCGAGACCTGA

Upstream 100 bases:

>100_bases
CGCCTATCCCCCCTCTTTCTTTTCTTTTTTCCTTGCTATATTAGGCATCAGAAATTTCCAGCCACAACACTAGCCATCCT
CCCCGCTCAACAGTTCAGGC

Downstream 100 bases:

>100_bases
TCCGTCTTCCGGCAACAAAGCATCATCCGGAACATCCATTTATCAACCATTCCGACACGCACTCACACCGATGAACTTCC
ACCTTACCACCATCGCCTGC

Product: alpha amylase catalytic subunit

Products: NA

Alternate protein names: Alpha Amylase; Alpha-Amylase; Alpha-Amylase Family Protein; Alpha Amylase Domain-Containing Protein; Alpha Amylase Catalytic Subunit; Alpha Amylase Catalytic Domain-Containing Protein; Alpha Amylase Family Protein; Glycosidase; Alpha Amylase Domain Protein; Glycoside Hydrolase; LOW QUALITY PROTEIN Alpha-Amylase Family Protein

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MFPLVYEINTRVWLRELSIRHGQTITLANVPDEELELLRCGRFTFVWLMGVWKRSCYSAAIAASHKGLRSELLDYLQDLQ
PEDIVASPYAVADYKVSEMLGGEEGLLVFRERLKSMNIKLMLDFVPNHMALDNRWLPEHPELFVSMTEDDPEDACFEFTK
GQFLAHGKDPYFPPWSDTLQLNYANPATHDMMIHNLLHVSDLCDGVRCDMAMLLIKEVFDTTWGSQYGEMPGEFWPTAIR
HIREKHPDFIFLAEAYWHKEWALQQMGFDFTYDKNFYDFLGSFPVNILKLRDHLLCDPEYQARLCRFIENHDEDRASEWF
GKNHAVAALVLLTSPGMTLIHQGQLEGLVRKIPVQIIRSAEEKGHEKLLPLYLKLFELRLDPVFQEKGRTEWLNLNAADL
SLCFGYCRSTSDSHAFVLANFSSHGIDIEFTHPALDGLDKSSITAYSTRFPEPLQEWQLNDNATGLHLKQNEGVLLMVKK
PET

Sequences:

>Translated_483_residues
MFPLVYEINTRVWLRELSIRHGQTITLANVPDEELELLRCGRFTFVWLMGVWKRSCYSAAIAASHKGLRSELLDYLQDLQ
PEDIVASPYAVADYKVSEMLGGEEGLLVFRERLKSMNIKLMLDFVPNHMALDNRWLPEHPELFVSMTEDDPEDACFEFTK
GQFLAHGKDPYFPPWSDTLQLNYANPATHDMMIHNLLHVSDLCDGVRCDMAMLLIKEVFDTTWGSQYGEMPGEFWPTAIR
HIREKHPDFIFLAEAYWHKEWALQQMGFDFTYDKNFYDFLGSFPVNILKLRDHLLCDPEYQARLCRFIENHDEDRASEWF
GKNHAVAALVLLTSPGMTLIHQGQLEGLVRKIPVQIIRSAEEKGHEKLLPLYLKLFELRLDPVFQEKGRTEWLNLNAADL
SLCFGYCRSTSDSHAFVLANFSSHGIDIEFTHPALDGLDKSSITAYSTRFPEPLQEWQLNDNATGLHLKQNEGVLLMVKK
PET
>Mature_483_residues
MFPLVYEINTRVWLRELSIRHGQTITLANVPDEELELLRCGRFTFVWLMGVWKRSCYSAAIAASHKGLRSELLDYLQDLQ
PEDIVASPYAVADYKVSEMLGGEEGLLVFRERLKSMNIKLMLDFVPNHMALDNRWLPEHPELFVSMTEDDPEDACFEFTK
GQFLAHGKDPYFPPWSDTLQLNYANPATHDMMIHNLLHVSDLCDGVRCDMAMLLIKEVFDTTWGSQYGEMPGEFWPTAIR
HIREKHPDFIFLAEAYWHKEWALQQMGFDFTYDKNFYDFLGSFPVNILKLRDHLLCDPEYQARLCRFIENHDEDRASEWF
GKNHAVAALVLLTSPGMTLIHQGQLEGLVRKIPVQIIRSAEEKGHEKLLPLYLKLFELRLDPVFQEKGRTEWLNLNAADL
SLCFGYCRSTSDSHAFVLANFSSHGIDIEFTHPALDGLDKSSITAYSTRFPEPLQEWQLNDNATGLHLKQNEGVLLMVKK
PET

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55766; Mature: 55766

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPLVYEINTRVWLRELSIRHGQTITLANVPDEELELLRCGRFTFVWLMGVWKRSCYSAA
CCCEEEECCCHHEEHHHHHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IAASHKGLRSELLDYLQDLQPEDIVASPYAVADYKVSEMLGGEEGLLVFRERLKSMNIKL
HHHHHCCHHHHHHHHHHCCCCCCEECCCCEEECCCHHHHHCCCCHHHHHHHHHHCCCEEE
MLDFVPNHMALDNRWLPEHPELFVSMTEDDPEDACFEFTKGQFLAHGKDPYFPPWSDTLQ
EEEECCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCEEECCCCCCCCCCCCEEE
LNYANPATHDMMIHNLLHVSDLCDGVRCDMAMLLIKEVFDTTWGSQYGEMPGEFWPTAIR
EEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHH
HIREKHPDFIFLAEAYWHKEWALQQMGFDFTYDKNFYDFLGSFPVNILKLRDHLLCDPEY
HHHHCCCCEEEEEHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCHHHHHHHHHHCCCCHH
QARLCRFIENHDEDRASEWFGKNHAVAALVLLTSPGMTLIHQGQLEGLVRKIPVQIIRSA
HHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHH
EEKGHEKLLPLYLKLFELRLDPVFQEKGRTEWLNLNAADLSLCFGYCRSTSDSHAFVLAN
HHCCHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCEEEEEE
FSSHGIDIEFTHPALDGLDKSSITAYSTRFPEPLQEWQLNDNATGLHLKQNEGVLLMVKK
CCCCCEEEEECCHHHCCCCCCCEEEECCCCCCHHHHCCCCCCCCEEEEECCCCEEEEEEC
PET
CCC
>Mature Secondary Structure
MFPLVYEINTRVWLRELSIRHGQTITLANVPDEELELLRCGRFTFVWLMGVWKRSCYSAA
CCCEEEECCCHHEEHHHHHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IAASHKGLRSELLDYLQDLQPEDIVASPYAVADYKVSEMLGGEEGLLVFRERLKSMNIKL
HHHHHCCHHHHHHHHHHCCCCCCEECCCCEEECCCHHHHHCCCCHHHHHHHHHHCCCEEE
MLDFVPNHMALDNRWLPEHPELFVSMTEDDPEDACFEFTKGQFLAHGKDPYFPPWSDTLQ
EEEECCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCEEECCCCCCCCCCCCEEE
LNYANPATHDMMIHNLLHVSDLCDGVRCDMAMLLIKEVFDTTWGSQYGEMPGEFWPTAIR
EEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHH
HIREKHPDFIFLAEAYWHKEWALQQMGFDFTYDKNFYDFLGSFPVNILKLRDHLLCDPEY
HHHHCCCCEEEEEHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCHHHHHHHHHHCCCCHH
QARLCRFIENHDEDRASEWFGKNHAVAALVLLTSPGMTLIHQGQLEGLVRKIPVQIIRSA
HHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHH
EEKGHEKLLPLYLKLFELRLDPVFQEKGRTEWLNLNAADLSLCFGYCRSTSDSHAFVLAN
HHCCHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCEEEEEE
FSSHGIDIEFTHPALDGLDKSSITAYSTRFPEPLQEWQLNDNATGLHLKQNEGVLLMVKK
CCCCCEEEEECCHHHCCCCCCCEEEECCCCCCHHHHCCCCCCCCEEEEECCCCEEEEEEC
PET
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA