| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213287
Identifier: 193213287
GI number: 193213287
Start: 1796237
End: 1797385
Strand: Direct
Name: 193213287
Synonym: Cpar_1644
Alternate gene names: NA
Gene position: 1796237-1797385 (Clockwise)
Preceding gene: 193213285
Following gene: 193213288
Centisome position: 78.46
GC content: 51.35
Gene sequence:
>1149_bases ATGAAAAAAATGCTGTCACTTGCTGCGATGTTCGCAGTGTTAGCATCTGCTTCCCCCGCTCAGGCTGAACTGAAATTTGG CGGTGACGCTAGCGTCCGTCTGAGAGACGTATCCTATTTCGGCGACGCCGATCAGTTTTCGTTCACTGGTTCCGCCAACG ATGACGTTGTCTTCCAGTACAGAGTTCGCCTGAAGGCAGCTGCAGATCTGGGTAATGGCTACTTCTTCAAGGCTCTGCTT CAGAACGAAAGCTTGGGTTCTGGCATCTTTGGTGAAGGGCAACCATACATCATTGCTGGTGGCTGGCAGAGTGTTGGTTA TGCAAACACCGAAGAGATCAATGTCGATGTCTCGAACTTCTACTTTGGGCGCATGCTCGAGGACTGCCACTATATGGTTG GCCGCCTTCCGCTGGGCTCACTCAACAACCCGATCTTCGATCTCACCATCTACCCGGGACAGCCACTCGGCACCCCTGTA TTCAACATCAATTTCGACCGTGTTTTGGGACTCAACTACGGGCACAAAATCGGCAACGGAATGCTGAATGCAACGCTTGT TGTGCTTGACAACGAATCTGGCGACAATACTGCTTATGATGGCGACGGTCTCTTTAACGACGGCTATGCACTGCACCTTG ACTACAAGGTCAACGTTGGAAATGTTACACTTGAGCCCCAGTTCTTGACCGTTCTGACAAACTCTGATGTCTTCACGCAG GATATCAGGGGAGCGGGCACCGTTGTCGCTCAAAAAGTCACGCCATACACCTTTGGCGCTCTCATTGGCGTTCCTGCCGG TGATGCAAAGCTGACCTTCGGTGCATTCTATACCAATTGCGATGACACGACCCCGAATTCTGGTTACAAAGTCGATTATG ATGGCTACCTGTTCAGGGTGAAAGGTGAAATCGGAAACTTCATGGCTTGGTATGATTTCAACCGCACCGATGTCAACGAT GGTTACGATACCAAACTCACCAACCACTTCGTATGGGCACAGTACAAGATTCCGGTGTACTCTTCTGCTGCTGGCAGTGT GACAATTCAGCCGACTCTTCGCTACCTCGCATCAAAGGCTGAAGACGACTTTGGCAGTGCCTCTGGCGAGCGTCTGCGCA GCGAGCTCTGGGCAACCGTCACCTTCTAA
Upstream 100 bases:
>100_bases CATAAGGTTCCCACACTCCGATGATGGTAACCGGCCGTTGTAAAGCGGTTTTTATTTGAATTGACCAAAACGCATCACAC AACCTAACGGAGAACACACA
Downstream 100 bases:
>100_bases GGCTTGCCTCAGCTTTAAATAAAAAAGCCGCAGGAAACTGCGGCTTTTTTATCGTCAGAGGAACAGAATGCTGACGGACA GTATAGGCGCGAAATGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKKMLSLAAMFAVLASASPAQAELKFGGDASVRLRDVSYFGDADQFSFTGSANDDVVFQYRVRLKAAADLGNGYFFKALL QNESLGSGIFGEGQPYIIAGGWQSVGYANTEEINVDVSNFYFGRMLEDCHYMVGRLPLGSLNNPIFDLTIYPGQPLGTPV FNINFDRVLGLNYGHKIGNGMLNATLVVLDNESGDNTAYDGDGLFNDGYALHLDYKVNVGNVTLEPQFLTVLTNSDVFTQ DIRGAGTVVAQKVTPYTFGALIGVPAGDAKLTFGAFYTNCDDTTPNSGYKVDYDGYLFRVKGEIGNFMAWYDFNRTDVND GYDTKLTNHFVWAQYKIPVYSSAAGSVTIQPTLRYLASKAEDDFGSASGERLRSELWATVTF
Sequences:
>Translated_382_residues MKKMLSLAAMFAVLASASPAQAELKFGGDASVRLRDVSYFGDADQFSFTGSANDDVVFQYRVRLKAAADLGNGYFFKALL QNESLGSGIFGEGQPYIIAGGWQSVGYANTEEINVDVSNFYFGRMLEDCHYMVGRLPLGSLNNPIFDLTIYPGQPLGTPV FNINFDRVLGLNYGHKIGNGMLNATLVVLDNESGDNTAYDGDGLFNDGYALHLDYKVNVGNVTLEPQFLTVLTNSDVFTQ DIRGAGTVVAQKVTPYTFGALIGVPAGDAKLTFGAFYTNCDDTTPNSGYKVDYDGYLFRVKGEIGNFMAWYDFNRTDVND GYDTKLTNHFVWAQYKIPVYSSAAGSVTIQPTLRYLASKAEDDFGSASGERLRSELWATVTF >Mature_382_residues MKKMLSLAAMFAVLASASPAQAELKFGGDASVRLRDVSYFGDADQFSFTGSANDDVVFQYRVRLKAAADLGNGYFFKALL QNESLGSGIFGEGQPYIIAGGWQSVGYANTEEINVDVSNFYFGRMLEDCHYMVGRLPLGSLNNPIFDLTIYPGQPLGTPV FNINFDRVLGLNYGHKIGNGMLNATLVVLDNESGDNTAYDGDGLFNDGYALHLDYKVNVGNVTLEPQFLTVLTNSDVFTQ DIRGAGTVVAQKVTPYTFGALIGVPAGDAKLTFGAFYTNCDDTTPNSGYKVDYDGYLFRVKGEIGNFMAWYDFNRTDVND GYDTKLTNHFVWAQYKIPVYSSAAGSVTIQPTLRYLASKAEDDFGSASGERLRSELWATVTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41765; Mature: 41765
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMLSLAAMFAVLASASPAQAELKFGGDASVRLRDVSYFGDADQFSFTGSANDDVVFQY CHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEEECCCCCCEEEECCCCCCEEEEE RVRLKAAADLGNGYFFKALLQNESLGSGIFGEGQPYIIAGGWQSVGYANTEEINVDVSNF EEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEHHHH YFGRMLEDCHYMVGRLPLGSLNNPIFDLTIYPGQPLGTPVFNINFDRVLGLNYGHKIGNG HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEEHHHEEECCCCCHHCCC MLNATLVVLDNESGDNTAYDGDGLFNDGYALHLDYKVNVGNVTLEPQFLTVLTNSDVFTQ CEEEEEEEEECCCCCCCEECCCCEECCCEEEEEEEEEEECCEEECCEEEEEEECCCCEEH DIRGAGTVVAQKVTPYTFGALIGVPAGDAKLTFGAFYTNCDDTTPNSGYKVDYDGYLFRV HCCCCCEEEEEECCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEECCCEEEEE KGEIGNFMAWYDFNRTDVNDGYDTKLTNHFVWAQYKIPVYSSAAGSVTIQPTLRYLASKA ECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCEEECCCCCEEEHHHHHHHHHHC EDDFGSASGERLRSELWATVTF CCCCCCCCHHHHHHHHEEEECC >Mature Secondary Structure MKKMLSLAAMFAVLASASPAQAELKFGGDASVRLRDVSYFGDADQFSFTGSANDDVVFQY CHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEEECCCCCCEEEECCCCCCEEEEE RVRLKAAADLGNGYFFKALLQNESLGSGIFGEGQPYIIAGGWQSVGYANTEEINVDVSNF EEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEHHHH YFGRMLEDCHYMVGRLPLGSLNNPIFDLTIYPGQPLGTPVFNINFDRVLGLNYGHKIGNG HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEEHHHEEECCCCCHHCCC MLNATLVVLDNESGDNTAYDGDGLFNDGYALHLDYKVNVGNVTLEPQFLTVLTNSDVFTQ CEEEEEEEEECCCCCCCEECCCCEECCCEEEEEEEEEEECCEEECCEEEEEEECCCCEEH DIRGAGTVVAQKVTPYTFGALIGVPAGDAKLTFGAFYTNCDDTTPNSGYKVDYDGYLFRV HCCCCCEEEEEECCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEECCCEEEEE KGEIGNFMAWYDFNRTDVNDGYDTKLTNHFVWAQYKIPVYSSAAGSVTIQPTLRYLASKA ECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCEEECCCCCEEEHHHHHHHHHHC EDDFGSASGERLRSELWATVTF CCCCCCCCHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA