Click here to switch to the map view.

The map label for this gene is 193213270

Identifier: 193213270

GI number: 193213270

Start: 1779329

End: 1779637

Strand: Direct

Name: 193213270

Synonym: Cpar_1627

Alternate gene names: NA

Gene position: 1779329-1779637 (Clockwise)

Preceding gene: 193213269

Following gene: 193213271

Centisome position: 77.73

GC content: 57.93

Gene sequence:

>309_bases
ATGGACAAACCGAAACATCACATCTTCGTCTGCGCAAGCTTCCGCGCCGCGGGCGCTCCTCAGGGCATCTGCCACAAGAA
AGAGGCGCTCGGACTCATCCCCTACCTTGAGAGCGAGCTTGCCGACCGCGGCATGAGCGACACAGCCGTCTCGGCCACGG
CCTGCCTGAACCTGTGCGAAAAAGGCCCGGTTGTGGTCGTCTATCCCGAAAATTTCTGGTACGGCGAGATCGACAGCGAG
GACAAGATTGATGAAATCCTCGACGCACTCGAAGAGGGCGAAGCTTGTGAAGATCACCTGATCAACTGA

Upstream 100 bases:

>100_bases
CCGGGGCAACTGAAAAAAATGTAAGAGCAAATATCCGCAGGGTTAAAACCCTGCTGAATATGGGACAACCCAACCACAAC
AATCAGAAAAAACCACTATC

Downstream 100 bases:

>100_bases
TTTCTTCCTTCCCTTCAGGAAGCCGGGGGGCTCTGCGTTGTGTTAACTGGAGACACAAAGTATCCCCCCTTTTTTTCGAA
AATCGTTATTACCTTACGTA

Product: ferredoxin, 2Fe-2S

Products: NA

Alternate protein names: 2FeCpFd [H]

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MDKPKHHIFVCASFRAAGAPQGICHKKEALGLIPYLESELADRGMSDTAVSATACLNLCEKGPVVVVYPENFWYGEIDSE
DKIDEILDALEEGEACEDHLIN

Sequences:

>Translated_102_residues
MDKPKHHIFVCASFRAAGAPQGICHKKEALGLIPYLESELADRGMSDTAVSATACLNLCEKGPVVVVYPENFWYGEIDSE
DKIDEILDALEEGEACEDHLIN
>Mature_102_residues
MDKPKHHIFVCASFRAAGAPQGICHKKEALGLIPYLESELADRGMSDTAVSATACLNLCEKGPVVVVYPENFWYGEIDSE
DKIDEILDALEEGEACEDHLIN

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 11194; Mature: 11194

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKPKHHIFVCASFRAAGAPQGICHKKEALGLIPYLESELADRGMSDTAVSATACLNLCE
CCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHC
KGPVVVVYPENFWYGEIDSEDKIDEILDALEEGEACEDHLIN
CCCEEEEECCCCEECCCCCCCCHHHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure
MDKPKHHIFVCASFRAAGAPQGICHKKEALGLIPYLESELADRGMSDTAVSATACLNLCE
CCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHC
KGPVVVVYPENFWYGEIDSEDKIDEILDALEEGEACEDHLIN
CCCEEEEECCCCEECCCCCCCCHHHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3790505; 7916603; 8334159; 8392833 [H]