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The map label for this gene is nifH [H]

Identifier: 193213262

GI number: 193213262

Start: 1770153

End: 1770977

Strand: Direct

Name: nifH [H]

Synonym: Cpar_1619

Alternate gene names: 193213262

Gene position: 1770153-1770977 (Clockwise)

Preceding gene: 193213260

Following gene: 193213263

Centisome position: 77.32

GC content: 56.97

Gene sequence:

>825_bases
ATGAGAAAAGTCGCGATTTATGGCAAGGGCGGTATCGGTAAATCCACCACCACTCAGAACACGGTGGCCGGTCTCGCAGA
AGCAGGCAAAAAAGTGATGGTCGTAGGTTGCGACCCGAAGGCTGACTCTACCCGTCTCCTGCTCGGTGGCCTTCAGCAGA
AAACTGTGCTCGACACCCTGCGCGAGGAGGGCGAAGAAGTCGAACTCGAAGATATCATCAAAGAGGGCTACAAAGGCAGC
CGTTGCACCGAATCCGGTGGTCCTGAGCCTGGCGTCGGTTGCGCTGGCCGCGGCATCATCACCTCGGTCAACCTGCTCGA
ACAGCTCGGTGCTTACGATGACGAATGGAACCTCGACTATGTGTTCTACGATGTGCTTGGTGACGTTGTGTGCGGCGGTT
TCGCCATGCCGATCCGCGACGGTAAAGCCGAAGAGATCTACATCGTCTGCTCTGGTGAAATGATGGCCATGTACGCTGCC
AACAACATCTGCAAAGGTATCCTCAAATACGCCGATGCCGGCGGTGTGCGCCTTGGCGGCCTGATCTGCAACAGCCGTAA
GGTTGACAACGAGCGCGAGATGATCGAGGAGCTCGCCCGCAGGATCGGCACCCAGATGATCCACTTCGTGCCCCGCGACA
ACTTCGTGCAGCGCGCCGAAATCAACAGAAAGACCGTGATCGACTACGATCCGACTCACCCGCAGGCCGATGAGTACCGC
GCTCTGGCTCGCAAGATCGACGAGAACAAGATGTTCGTCATTCCCAAGCCGCTCGAAATCGACGAACTCGAATCGCTGCT
CATCGAGTTTGGCATCGCCAACTAA

Upstream 100 bases:

>100_bases
ACCAATTGCAGCATATTCTTTAATTATTCAGGAAACAGAAAATTAAATCCTGAATATTTTCAGTCAAAATGACTCCAAAC
CAATAAAATTGAGTACTACC

Downstream 100 bases:

>100_bases
TCGGCCAAAGCAGTCAAAAGAACCAGTAATCTCTTGAAATTATAGCCTTTAACAAGAAGGAGAACACACACATGTTAATG
ATCAGAACCATCGTCAGGCC

Product: nitrogenase reductase

Products: NA

Alternate protein names: Nitrogenase Fe protein; Nitrogenase component II; Nitrogenase reductase [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRKVAIYGKGGIGKSTTTQNTVAGLAEAGKKVMVVGCDPKADSTRLLLGGLQQKTVLDTLREEGEEVELEDIIKEGYKGS
RCTESGGPEPGVGCAGRGIITSVNLLEQLGAYDDEWNLDYVFYDVLGDVVCGGFAMPIRDGKAEEIYIVCSGEMMAMYAA
NNICKGILKYADAGGVRLGGLICNSRKVDNEREMIEELARRIGTQMIHFVPRDNFVQRAEINRKTVIDYDPTHPQADEYR
ALARKIDENKMFVIPKPLEIDELESLLIEFGIAN

Sequences:

>Translated_274_residues
MRKVAIYGKGGIGKSTTTQNTVAGLAEAGKKVMVVGCDPKADSTRLLLGGLQQKTVLDTLREEGEEVELEDIIKEGYKGS
RCTESGGPEPGVGCAGRGIITSVNLLEQLGAYDDEWNLDYVFYDVLGDVVCGGFAMPIRDGKAEEIYIVCSGEMMAMYAA
NNICKGILKYADAGGVRLGGLICNSRKVDNEREMIEELARRIGTQMIHFVPRDNFVQRAEINRKTVIDYDPTHPQADEYR
ALARKIDENKMFVIPKPLEIDELESLLIEFGIAN
>Mature_274_residues
MRKVAIYGKGGIGKSTTTQNTVAGLAEAGKKVMVVGCDPKADSTRLLLGGLQQKTVLDTLREEGEEVELEDIIKEGYKGS
RCTESGGPEPGVGCAGRGIITSVNLLEQLGAYDDEWNLDYVFYDVLGDVVCGGFAMPIRDGKAEEIYIVCSGEMMAMYAA
NNICKGILKYADAGGVRLGGLICNSRKVDNEREMIEELARRIGTQMIHFVPRDNFVQRAEINRKTVIDYDPTHPQADEYR
ALARKIDENKMFVIPKPLEIDELESLLIEFGIAN

Specific function: The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components:the iron protein and the molybdenum-iron protein [H]

COG id: COG1348

COG function: function code P; Nitrogenase subunit NifH (ATPase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NifH/BchL/ChlL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000392
- InterPro:   IPR005977 [H]

Pfam domain/function: PF00142 Fer4_NifH [H]

EC number: =1.18.6.1 [H]

Molecular weight: Translated: 30091; Mature: 30091

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00746 NIFH_FRXC_1 ; PS00692 NIFH_FRXC_2 ; PS51026 NIFH_FRXC_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVAIYGKGGIGKSTTTQNTVAGLAEAGKKVMVVGCDPKADSTRLLLGGLQQKTVLDTL
CCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCHHHHHHHH
REEGEEVELEDIIKEGYKGSRCTESGGPEPGVGCAGRGIITSVNLLEQLGAYDDEWNLDY
HHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
VFYDVLGDVVCGGFAMPIRDGKAEEIYIVCSGEMMAMYAANNICKGILKYADAGGVRLGG
EHHHHHHHHHHCCEEEECCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHCCCCEEEEE
LICNSRKVDNEREMIEELARRIGTQMIHFVPRDNFVQRAEINRKTVIDYDPTHPQADEYR
EEECCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHCCCCEEEECCCCCCCHHHHH
ALARKIDENKMFVIPKPLEIDELESLLIEFGIAN
HHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKVAIYGKGGIGKSTTTQNTVAGLAEAGKKVMVVGCDPKADSTRLLLGGLQQKTVLDTL
CCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCHHHHHHHH
REEGEEVELEDIIKEGYKGSRCTESGGPEPGVGCAGRGIITSVNLLEQLGAYDDEWNLDY
HHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
VFYDVLGDVVCGGFAMPIRDGKAEEIYIVCSGEMMAMYAANNICKGILKYADAGGVRLGG
EHHHHHHHHHHCCEEEECCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHCCCCEEEEE
LICNSRKVDNEREMIEELARRIGTQMIHFVPRDNFVQRAEINRKTVIDYDPTHPQADEYR
EEECCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHCCCCEEEECCCCCCCHHHHH
ALARKIDENKMFVIPKPLEIDELESLLIEFGIAN
HHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA