Click here to switch to the map view.

The map label for this gene is 193213105

Identifier: 193213105

GI number: 193213105

Start: 1596683

End: 1597936

Strand: Direct

Name: 193213105

Synonym: Cpar_1460

Alternate gene names: NA

Gene position: 1596683-1597936 (Clockwise)

Preceding gene: 193213104

Following gene: 193213106

Centisome position: 69.75

GC content: 51.12

Gene sequence:

>1254_bases
ATGATTCAAAAAAAAACTGTGCTGACAACCGTTTATAGCGCAATCGTTATCTGCTTTATCCTGATTTTTGGCATCGGCGT
GTTCGCCATGACCGTGGAGCCCGATGAAAGCTGTATCCTTATGAGCACCATGAAGGCCTTCGGCATTCGATTCCTGCCTG
CGAGCGCTGTAGAGGTACCGGTACTCACTTCCGGTGGAGTGCATTTCGTGCTGCATGGCTTGATTGCTCTTGTGTGGGGC
GAAAATATCTTCGTCCACCGCCTTGCTTCGTTACTCGTTACGGGGCTCCTGTTAGGAATTGTATTCAAAATAATCGAACT
CCGAGTTAAGGACAGGGTTCTCGCTGCTGCCGGAACAGCCCTGTTCGTAACGGCCCCTGGCTTTCTGTTACAGGCCTCAT
TAGCGACAGCGGAGATCGTCGCGACGACCATTTTTTTGCTTGGAGCGCTGTATTGGGTCCACTTTGGTCATCGATCAATG
GGTATGGCAATCCTGGGCGGTGTGTTATTCGGGCTTGCCTGTGCCACGCGCATGATCTGTCTTACGATGCTGCCGGCTAT
CCTGGTGTGGTCGGCGTTTGTTCACCGAGGTGCTCGACTTATTTATCCTATTATTGCCATTTACGTCGCTATTTTTGTCT
TCATCGGATTTGAAGCGGCCTATTTATATGCGTTCGGTGACTTCTCTAAGAGTCACCTGTTGGCAACCGCAGGGGCCGCC
GGACTTGCCCCCCTATACGGGGGTATCATTATGCGGCTCAACTACCTGGTGGTGGCTAATGGAATTATTCCTGTAATGGC
CATCGTCGCGCTGCTTGCCTGGTTCATATCTTTGCTGGATAATGAGAAGTATGATCGCAAGCTCTTAGATTTATGCAGTT
TCCTTTTGCTGGCGGGTGGTGTGGGGTGGCTCGTCTGGGTGCTCAAATCCCCAATACCGCACATCCGTTATCTCTGGCCG
GCTATTCCGCTTCTGTGGCTGGCAGCCATCCTGCTCGGTTTGACTATCCTTAGCCGTGTGAGACAGGATAGAACGATTAT
GATTGCTCACTCCGCGATTATCCTTATGTGTGCAATTCAGGTTTTACTCAACATACGCATACTTGCGGTAGGAGACTCGC
TTGCACTGGTGTATGAAGATGTTCGCGGTTCGCGATTGGGAACCCCGGGAAATTATTCCAGGCTCGAACAAACCAGGATG
GAATGGCTGCTCTTCTGGCAGCTTTGCCTGCGTCCGCAAGCATCTATGCCTTGA

Upstream 100 bases:

>100_bases
ACATGGATAGTATCTCATTCATCGTATCAGGAAACGCGTCATCGAAGCCGCGAAATAAGATGCCATCTCGCCGGATTACA
GAAAAGGAATTGAAACACAA

Downstream 100 bases:

>100_bases
TAGAGCAAGCAGCTTACCCGATGACTTATCTGTCCAAGCGGACAGTTAAATCGTTCACGCCGTCGTCCAAAGTGTCCGCG
GATGATTATCTGCTCGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MIQKKTVLTTVYSAIVICFILIFGIGVFAMTVEPDESCILMSTMKAFGIRFLPASAVEVPVLTSGGVHFVLHGLIALVWG
ENIFVHRLASLLVTGLLLGIVFKIIELRVKDRVLAAAGTALFVTAPGFLLQASLATAEIVATTIFLLGALYWVHFGHRSM
GMAILGGVLFGLACATRMICLTMLPAILVWSAFVHRGARLIYPIIAIYVAIFVFIGFEAAYLYAFGDFSKSHLLATAGAA
GLAPLYGGIIMRLNYLVVANGIIPVMAIVALLAWFISLLDNEKYDRKLLDLCSFLLLAGGVGWLVWVLKSPIPHIRYLWP
AIPLLWLAAILLGLTILSRVRQDRTIMIAHSAIILMCAIQVLLNIRILAVGDSLALVYEDVRGSRLGTPGNYSRLEQTRM
EWLLFWQLCLRPQASMP

Sequences:

>Translated_417_residues
MIQKKTVLTTVYSAIVICFILIFGIGVFAMTVEPDESCILMSTMKAFGIRFLPASAVEVPVLTSGGVHFVLHGLIALVWG
ENIFVHRLASLLVTGLLLGIVFKIIELRVKDRVLAAAGTALFVTAPGFLLQASLATAEIVATTIFLLGALYWVHFGHRSM
GMAILGGVLFGLACATRMICLTMLPAILVWSAFVHRGARLIYPIIAIYVAIFVFIGFEAAYLYAFGDFSKSHLLATAGAA
GLAPLYGGIIMRLNYLVVANGIIPVMAIVALLAWFISLLDNEKYDRKLLDLCSFLLLAGGVGWLVWVLKSPIPHIRYLWP
AIPLLWLAAILLGLTILSRVRQDRTIMIAHSAIILMCAIQVLLNIRILAVGDSLALVYEDVRGSRLGTPGNYSRLEQTRM
EWLLFWQLCLRPQASMP
>Mature_417_residues
MIQKKTVLTTVYSAIVICFILIFGIGVFAMTVEPDESCILMSTMKAFGIRFLPASAVEVPVLTSGGVHFVLHGLIALVWG
ENIFVHRLASLLVTGLLLGIVFKIIELRVKDRVLAAAGTALFVTAPGFLLQASLATAEIVATTIFLLGALYWVHFGHRSM
GMAILGGVLFGLACATRMICLTMLPAILVWSAFVHRGARLIYPIIAIYVAIFVFIGFEAAYLYAFGDFSKSHLLATAGAA
GLAPLYGGIIMRLNYLVVANGIIPVMAIVALLAWFISLLDNEKYDRKLLDLCSFLLLAGGVGWLVWVLKSPIPHIRYLWP
AIPLLWLAAILLGLTILSRVRQDRTIMIAHSAIILMCAIQVLLNIRILAVGDSLALVYEDVRGSRLGTPGNYSRLEQTRM
EWLLFWQLCLRPQASMP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45657; Mature: 45657

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQKKTVLTTVYSAIVICFILIFGIGVFAMTVEPDESCILMSTMKAFGIRFLPASAVEVP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHCEEECCCCCCEEC
VLTSGGVHFVLHGLIALVWGENIFVHRLASLLVTGLLLGIVFKIIELRVKDRVLAAAGTA
EECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
LFVTAPGFLLQASLATAEIVATTIFLLGALYWVHFGHRSMGMAILGGVLFGLACATRMIC
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LTMLPAILVWSAFVHRGARLIYPIIAIYVAIFVFIGFEAAYLYAFGDFSKSHLLATAGAA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
GLAPLYGGIIMRLNYLVVANGIIPVMAIVALLAWFISLLDNEKYDRKLLDLCSFLLLAGG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
VGWLVWVLKSPIPHIRYLWPAIPLLWLAAILLGLTILSRVRQDRTIMIAHSAIILMCAIQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH
VLLNIRILAVGDSLALVYEDVRGSRLGTPGNYSRLEQTRMEWLLFWQLCLRPQASMP
HHHCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIQKKTVLTTVYSAIVICFILIFGIGVFAMTVEPDESCILMSTMKAFGIRFLPASAVEVP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHCEEECCCCCCEEC
VLTSGGVHFVLHGLIALVWGENIFVHRLASLLVTGLLLGIVFKIIELRVKDRVLAAAGTA
EECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
LFVTAPGFLLQASLATAEIVATTIFLLGALYWVHFGHRSMGMAILGGVLFGLACATRMIC
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LTMLPAILVWSAFVHRGARLIYPIIAIYVAIFVFIGFEAAYLYAFGDFSKSHLLATAGAA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
GLAPLYGGIIMRLNYLVVANGIIPVMAIVALLAWFISLLDNEKYDRKLLDLCSFLLLAGG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
VGWLVWVLKSPIPHIRYLWPAIPLLWLAAILLGLTILSRVRQDRTIMIAHSAIILMCAIQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH
VLLNIRILAVGDSLALVYEDVRGSRLGTPGNYSRLEQTRMEWLLFWQLCLRPQASMP
HHHCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA