Click here to switch to the map view.

The map label for this gene is 193213039

Identifier: 193213039

GI number: 193213039

Start: 1519192

End: 1519758

Strand: Direct

Name: 193213039

Synonym: Cpar_1391

Alternate gene names: NA

Gene position: 1519192-1519758 (Clockwise)

Preceding gene: 193213038

Following gene: 193213040

Centisome position: 66.36

GC content: 56.79

Gene sequence:

>567_bases
ATGAGTTCACCATTGCAGAAGGCGCTCGTCTTCAAATTTCTGAGCCGCACCCTGGCCTATCCGAACCAGGCGTTCATTCC
TACGCTCGTCGAGGTATCGGACGAAATCGAAACGGGCAAAGAGGAGCGTCAGGCACTCATCAGAGCCTTCGAGCTTGAGG
AGACCGAGCCGCTTCAGGCCGAATACACGCGCCTGTTCATCAACGGCTACCCGCACACCGCCTGCCCGCCCTACGAATCG
ATCTATCTGGAAAAGCGGATGCACGGCGACGCTGCCGTAGCGGTCTCTGCCGCCTATGCCGAATGGGAGATGACCGTGGA
GCCGGGACTGATCGACCACCTATCGACAGAGCTGGAGTTCCTTGCCTTTCTCGCCTCCGCGGAATCGCTGGACAAAGCCG
TGAGCAAGGATGCCCAAAAAGCCTCAGAGCGATTCATCCGTCAGCACCTCTGCCGCTGGGTGCCACAATTTATTGATGAT
TTGAAAGAGGGCGCGAAACTCGAAGCCTACCGAAAGCTGGGAGAATTGATGGAGAGCGTGCTAGGGGAATATTGCGAGAA
AGGATGA

Upstream 100 bases:

>100_bases
GGTATGTTCCAGTTCCCCTGGTAACCTACGGCTTGAAAGCAAAAACCTCGACGCCCGGTCTCCGCTTGTCGGATCACCGG
GCGTCCATCGTTTATCCACT

Downstream 100 bases:

>100_bases
TGGCCTACCAGTCAGATTGTTTCCATAACTCATGAATCCAGAGTCTTTACTTCGCTCAAAAATCCCTCAAGTGTCATGAT
TTCAGCTCGAATATCCTTGT

Product: cytoplasmic chaperone TorD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSSPLQKALVFKFLSRTLAYPNQAFIPTLVEVSDEIETGKEERQALIRAFELEETEPLQAEYTRLFINGYPHTACPPYES
IYLEKRMHGDAAVAVSAAYAEWEMTVEPGLIDHLSTELEFLAFLASAESLDKAVSKDAQKASERFIRQHLCRWVPQFIDD
LKEGAKLEAYRKLGELMESVLGEYCEKG

Sequences:

>Translated_188_residues
MSSPLQKALVFKFLSRTLAYPNQAFIPTLVEVSDEIETGKEERQALIRAFELEETEPLQAEYTRLFINGYPHTACPPYES
IYLEKRMHGDAAVAVSAAYAEWEMTVEPGLIDHLSTELEFLAFLASAESLDKAVSKDAQKASERFIRQHLCRWVPQFIDD
LKEGAKLEAYRKLGELMESVLGEYCEKG
>Mature_187_residues
SSPLQKALVFKFLSRTLAYPNQAFIPTLVEVSDEIETGKEERQALIRAFELEETEPLQAEYTRLFINGYPHTACPPYESI
YLEKRMHGDAAVAVSAAYAEWEMTVEPGLIDHLSTELEFLAFLASAESLDKAVSKDAQKASERFIRQHLCRWVPQFIDDL
KEGAKLEAYRKLGELMESVLGEYCEKG

Specific function: Unknown

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21341; Mature: 21210

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPLQKALVFKFLSRTLAYPNQAFIPTLVEVSDEIETGKEERQALIRAFELEETEPLQA
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHH
EYTRLFINGYPHTACPPYESIYLEKRMHGDAAVAVSAAYAEWEMTVEPGLIDHLSTELEF
HHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LAFLASAESLDKAVSKDAQKASERFIRQHLCRWVPQFIDDLKEGAKLEAYRKLGELMESV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LGEYCEKG
HHHHHCCC
>Mature Secondary Structure 
SSPLQKALVFKFLSRTLAYPNQAFIPTLVEVSDEIETGKEERQALIRAFELEETEPLQA
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHH
EYTRLFINGYPHTACPPYESIYLEKRMHGDAAVAVSAAYAEWEMTVEPGLIDHLSTELEF
HHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LAFLASAESLDKAVSKDAQKASERFIRQHLCRWVPQFIDDLKEGAKLEAYRKLGELMESV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LGEYCEKG
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA