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The map label for this gene is yjbQ [C]

Identifier: 193212922

GI number: 193212922

Start: 1385225

End: 1385644

Strand: Direct

Name: yjbQ [C]

Synonym: Cpar_1272

Alternate gene names: 193212922

Gene position: 1385225-1385644 (Clockwise)

Preceding gene: 193212921

Following gene: 193212923

Centisome position: 60.51

GC content: 61.67

Gene sequence:

>420_bases
ATGACCTACAGCGACCGCATACGGCTTGACACGCAGGGTTTTTCCGACATCGTCGATGTGACTCGTGAAGTCAATCGCAT
CATCGCCGACTCGGGCCTGAAGAGCGGCATCGTCACAGTATCGGCTGTTGGATCGACCGCTTCCGTAACGACGATAGAGT
TCGAACCGGCGCTTGTCGAGGATTTCCGCGAGAAGCTCCAGCAGCTCTTTCCGAGCACCGAGCGCAGCCGCCACTCGGAG
ACCTGGGGCGACGACAACGGCTTCTCGCACATGCGTGCCTCGTTCATGGGTCCAGCCGTCACGCTGCCGGTCAGCGGCGG
CGAACCGGTGCTCGGCACCTGGCAGCAGATCGTCTTCATCGACCACGACAACCGGCCGCGCAGCCGCGAAATTTTCGTGC
AGCTTGTCGGCGAACCCTGA

Upstream 100 bases:

>100_bases
GCTCGCCGAGAACTATGGACGTGCGCTACAACGCCATCGCCCAGAACTTCCTCGTCGCAGGCATGATGGTTTGCGCCTTC
GCCATCAAAGCGATCAATCC

Downstream 100 bases:

>100_bases
AAAGCAAGGAGTGAAGAGCATGAAGACCACGCTTTTCGACATCCAGCCGGCTGTTTCGATCATCCTGCCCACGTTTAATC
GTGCGCCACACCTCTCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTYSDRIRLDTQGFSDIVDVTREVNRIIADSGLKSGIVTVSAVGSTASVTTIEFEPALVEDFREKLQQLFPSTERSRHSE
TWGDDNGFSHMRASFMGPAVTLPVSGGEPVLGTWQQIVFIDHDNRPRSREIFVQLVGEP

Sequences:

>Translated_139_residues
MTYSDRIRLDTQGFSDIVDVTREVNRIIADSGLKSGIVTVSAVGSTASVTTIEFEPALVEDFREKLQQLFPSTERSRHSE
TWGDDNGFSHMRASFMGPAVTLPVSGGEPVLGTWQQIVFIDHDNRPRSREIFVQLVGEP
>Mature_138_residues
TYSDRIRLDTQGFSDIVDVTREVNRIIADSGLKSGIVTVSAVGSTASVTTIEFEPALVEDFREKLQQLFPSTERSRHSET
WGDDNGFSHMRASFMGPAVTLPVSGGEPVLGTWQQIVFIDHDNRPRSREIFVQLVGEP

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15440; Mature: 15309

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYSDRIRLDTQGFSDIVDVTREVNRIIADSGLKSGIVTVSAVGSTASVTTIEFEPALVE
CCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECHHHHH
DFREKLQQLFPSTERSRHSETWGDDNGFSHMRASFMGPAVTLPVSGGEPVLGTWQQIVFI
HHHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEE
DHDNRPRSREIFVQLVGEP
ECCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
TYSDRIRLDTQGFSDIVDVTREVNRIIADSGLKSGIVTVSAVGSTASVTTIEFEPALVE
CCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECHHHHH
DFREKLQQLFPSTERSRHSETWGDDNGFSHMRASFMGPAVTLPVSGGEPVLGTWQQIVFI
HHHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEE
DHDNRPRSREIFVQLVGEP
ECCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]