Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is sglT [H]
Identifier: 193212888
GI number: 193212888
Start: 1351723
End: 1353483
Strand: Direct
Name: sglT [H]
Synonym: Cpar_1236
Alternate gene names: 193212888
Gene position: 1351723-1353483 (Clockwise)
Preceding gene: 193212887
Following gene: 193212889
Centisome position: 59.05
GC content: 59.8
Gene sequence:
>1761_bases ATGGCACAACTCACCCCACTGGACATCTCATTCATTGCGGGTTACCTGCTGTTAACCCTGCTGGTCGGCCTGTTCTTTTC AAGGCGGGCATCCGAAAACGTTGGCGAGTTCTTCCTTTCGGGACGCAAGCTACCGTGGTGGATCGCAGGTACCGGCATGG TTGCCACAACGTTCGCCGCCGACACACCGCTCGCCGTGGCGGGGTTTGTTGCCAAAAACGGCATCGCGGGGAACTGGGTG TGGTGGACGTTCGTGTCGGGTGGAATGCTTACGGTGTTCTTTTTCGCCCGGCTCTGGCGACGGGCAAACATTCTAACCGA CCTCGAATTCATCGAGCTGCGCTACAGCGGCAAGGCTGCGAGCTTTCTGCGCGGCTTCAAGGCGATTTATTTCGGCCTCT TCATCAACGCGGTGATCATCGGGTGGGTGAACCTGGCCATGTTCAAAATCATCAAGATCATGATCCCCGGCCTAGACCCG CAGCTCACCATCGTGGGGCTCGTGATTTTCACGGCGATCTACTCCGGCATGTCTGGCCTGTGGGGCGTTTCAATCACCGA TGCCGTGCAGTTCATCATCGCGATGGGTGGTTGCATCGTCCTCGCAGTGCTGGCGGTCAACTCGCCGCAGGTTACGGCGG CTGGCGGCCTGAAAGAGGCCCTGCCTGGCTGGATGTTCGACTTCTTCCCGTCGTTCTCTTCGACCGTCAACACATCGGCG ACCGGAGCCTACGCCCTGCCCTTCACCGCCTTTGCTGCTATGGCGTTCGTGCAGTGGTGGTCGTCGTGGTATCCGGGCGC GGAGCCGGGCGGCGGCGGCTACATCGCCCAGCGCATGATGAGCGCCAAGGACGAAAAAAACTCGCTGCTGGCGACGCTCT GGTTCACTATTGCGCACTACTGCGTACGCCCGTGGCCATGGATCGTCGTCGGCCTGGCGAGCCTCGTGATGTTCCCTCAC CTGCCCGCCGGTCAGAAGGAGGACGGCTTCGTGTATGTCATGAACGCCGTGCTGCCCGCCGGACTGAAGGGCCTGCTCAT CGCAGCCTTCATGGCGGCCTACATGTCAACGCTCTCGACCCACCTGAACTGGGGCACGAGCTACCTCATCAACGACCTTT ACAAGCGCTTCGTCAAGCCGGAGGCTGAACAGAACCACTACGTGCTGATGTCGCGGATCGTCACGGCGATCACGGCGATC TTCGCCCTTTACATCACGTTCTACGTGCTGGAGACCATCACCGGCGCCTGGGAGTTCATCATCCAGTGCGGCGCGGGCAC AGGCTTCGTGCTGATCATGCGCTGGTTCTGGTGGCGGCTCAACGCCTGGTCGGAGATCACCTCGATGGTCGCGCCGATCG TTGCATACACCTGGATCAGCCAGTTCACCACGATCGTGTTCCCCGAGTCAATCTACATCATCGTGCTCTTCACGATTGCC GTAACCCTCGCCGTCACCTGGCTCACCAAACCAACTGACAGATCAACGTTGCACGCCTTCTACCGCACCACGAGGGTTGG CGGAGCGCTGTGGAAACCGGTGGCCGACGAACTTCCTGACGTACAAGGCGACACCGGCTTCCCGGCCCTTTTTGCCAACT GGTTTTTCGGCATCGTGCTGGTTTACGCCACACTGTTCGGAACCGGCAAACTGATCTTTGGCGAACCGCTGGCTGCCGCG CTCTACTACGCCGCCGGAGCATTGGCTGGCGTAATGATCTACCGCGACCTGTCGAAGAGAAACTGGAAAACCTTCGATTA A
Upstream 100 bases:
>100_bases GAGTAATCACGGTGGATTTGATGGGCAAAATAGACCCAATGGACAACATGGATAACCGCCCACCACATTCCTGAAAAGGC ACCAAACCCAACACACGACC
Downstream 100 bases:
>100_bases CAATGACCTCGCGCCGCAAACTCATCCTCGCCTCGCAATCGCCGCGACGTCGGGAATTGCTCGCCATGACGGGAATTCCG TTCGAAACCGCCTCGGTCGA
Product: Na+/solute symporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MAQLTPLDISFIAGYLLLTLLVGLFFSRRASENVGEFFLSGRKLPWWIAGTGMVATTFAADTPLAVAGFVAKNGIAGNWV WWTFVSGGMLTVFFFARLWRRANILTDLEFIELRYSGKAASFLRGFKAIYFGLFINAVIIGWVNLAMFKIIKIMIPGLDP QLTIVGLVIFTAIYSGMSGLWGVSITDAVQFIIAMGGCIVLAVLAVNSPQVTAAGGLKEALPGWMFDFFPSFSSTVNTSA TGAYALPFTAFAAMAFVQWWSSWYPGAEPGGGGYIAQRMMSAKDEKNSLLATLWFTIAHYCVRPWPWIVVGLASLVMFPH LPAGQKEDGFVYVMNAVLPAGLKGLLIAAFMAAYMSTLSTHLNWGTSYLINDLYKRFVKPEAEQNHYVLMSRIVTAITAI FALYITFYVLETITGAWEFIIQCGAGTGFVLIMRWFWWRLNAWSEITSMVAPIVAYTWISQFTTIVFPESIYIIVLFTIA VTLAVTWLTKPTDRSTLHAFYRTTRVGGALWKPVADELPDVQGDTGFPALFANWFFGIVLVYATLFGTGKLIFGEPLAAA LYYAAGALAGVMIYRDLSKRNWKTFD
Sequences:
>Translated_586_residues MAQLTPLDISFIAGYLLLTLLVGLFFSRRASENVGEFFLSGRKLPWWIAGTGMVATTFAADTPLAVAGFVAKNGIAGNWV WWTFVSGGMLTVFFFARLWRRANILTDLEFIELRYSGKAASFLRGFKAIYFGLFINAVIIGWVNLAMFKIIKIMIPGLDP QLTIVGLVIFTAIYSGMSGLWGVSITDAVQFIIAMGGCIVLAVLAVNSPQVTAAGGLKEALPGWMFDFFPSFSSTVNTSA TGAYALPFTAFAAMAFVQWWSSWYPGAEPGGGGYIAQRMMSAKDEKNSLLATLWFTIAHYCVRPWPWIVVGLASLVMFPH LPAGQKEDGFVYVMNAVLPAGLKGLLIAAFMAAYMSTLSTHLNWGTSYLINDLYKRFVKPEAEQNHYVLMSRIVTAITAI FALYITFYVLETITGAWEFIIQCGAGTGFVLIMRWFWWRLNAWSEITSMVAPIVAYTWISQFTTIVFPESIYIIVLFTIA VTLAVTWLTKPTDRSTLHAFYRTTRVGGALWKPVADELPDVQGDTGFPALFANWFFGIVLVYATLFGTGKLIFGEPLAAA LYYAAGALAGVMIYRDLSKRNWKTFD >Mature_585_residues AQLTPLDISFIAGYLLLTLLVGLFFSRRASENVGEFFLSGRKLPWWIAGTGMVATTFAADTPLAVAGFVAKNGIAGNWVW WTFVSGGMLTVFFFARLWRRANILTDLEFIELRYSGKAASFLRGFKAIYFGLFINAVIIGWVNLAMFKIIKIMIPGLDPQ LTIVGLVIFTAIYSGMSGLWGVSITDAVQFIIAMGGCIVLAVLAVNSPQVTAAGGLKEALPGWMFDFFPSFSSTVNTSAT GAYALPFTAFAAMAFVQWWSSWYPGAEPGGGGYIAQRMMSAKDEKNSLLATLWFTIAHYCVRPWPWIVVGLASLVMFPHL PAGQKEDGFVYVMNAVLPAGLKGLLIAAFMAAYMSTLSTHLNWGTSYLINDLYKRFVKPEAEQNHYVLMSRIVTAITAIF ALYITFYVLETITGAWEFIIQCGAGTGFVLIMRWFWWRLNAWSEITSMVAPIVAYTWISQFTTIVFPESIYIIVLFTIAV TLAVTWLTKPTDRSTLHAFYRTTRVGGALWKPVADELPDVQGDTGFPALFANWFFGIVLVYATLFGTGKLIFGEPLAAAL YYAAGALAGVMIYRDLSKRNWKTFD
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI14140236, Length=414, Percent_Identity=24.8792270531401, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI109659836, Length=430, Percent_Identity=24.8837209302326, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI17941285, Length=474, Percent_Identity=23.8396624472574, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI4507033, Length=438, Percent_Identity=24.2009132420091, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI4507031, Length=428, Percent_Identity=22.6635514018692, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI109659839, Length=446, Percent_Identity=23.9910313901345, Blast_Score=74, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 64791; Mature: 64659
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQLTPLDISFIAGYLLLTLLVGLFFSRRASENVGEFFLSGRKLPWWIAGTGMVATTFAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCCHHHHHCCC DTPLAVAGFVAKNGIAGNWVWWTFVSGGMLTVFFFARLWRRANILTDLEFIELRYSGKAA CCCHHHHHHHHHCCCCCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHCHHHHEEEECCCHH SFLRGFKAIYFGLFINAVIIGWVNLAMFKIIKIMIPGLDPQLTIVGLVIFTAIYSGMSGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC WGVSITDAVQFIIAMGGCIVLAVLAVNSPQVTAAGGLKEALPGWMFDFFPSFSSTVNTSA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCHHHHHHHCCCCCCCCCCC TGAYALPFTAFAAMAFVQWWSSWYPGAEPGGGGYIAQRMMSAKDEKNSLLATLWFTIAHY CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH CVRPWPWIVVGLASLVMFPHLPAGQKEDGFVYVMNAVLPAGLKGLLIAAFMAAYMSTLST HHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHH HLNWGTSYLINDLYKRFVKPEAEQNHYVLMSRIVTAITAIFALYITFYVLETITGAWEFI HHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQCGAGTGFVLIMRWFWWRLNAWSEITSMVAPIVAYTWISQFTTIVFPESIYIIVLFTIA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VTLAVTWLTKPTDRSTLHAFYRTTRVGGALWKPVADELPDVQGDTGFPALFANWFFGIVL HHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH VYATLFGTGKLIFGEPLAAALYYAAGALAGVMIYRDLSKRNWKTFD HHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AQLTPLDISFIAGYLLLTLLVGLFFSRRASENVGEFFLSGRKLPWWIAGTGMVATTFAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCCHHHHHCCC DTPLAVAGFVAKNGIAGNWVWWTFVSGGMLTVFFFARLWRRANILTDLEFIELRYSGKAA CCCHHHHHHHHHCCCCCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHCHHHHEEEECCCHH SFLRGFKAIYFGLFINAVIIGWVNLAMFKIIKIMIPGLDPQLTIVGLVIFTAIYSGMSGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC WGVSITDAVQFIIAMGGCIVLAVLAVNSPQVTAAGGLKEALPGWMFDFFPSFSSTVNTSA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCHHHHHHHCCCCCCCCCCC TGAYALPFTAFAAMAFVQWWSSWYPGAEPGGGGYIAQRMMSAKDEKNSLLATLWFTIAHY CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH CVRPWPWIVVGLASLVMFPHLPAGQKEDGFVYVMNAVLPAGLKGLLIAAFMAAYMSTLST HHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHH HLNWGTSYLINDLYKRFVKPEAEQNHYVLMSRIVTAITAIFALYITFYVLETITGAWEFI HHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQCGAGTGFVLIMRWFWWRLNAWSEITSMVAPIVAYTWISQFTTIVFPESIYIIVLFTIA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VTLAVTWLTKPTDRSTLHAFYRTTRVGGALWKPVADELPDVQGDTGFPALFANWFFGIVL HHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH VYATLFGTGKLIFGEPLAAALYYAAGALAGVMIYRDLSKRNWKTFD HHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]