Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
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Accession | NC_011004 |
Length | 5,744,041 |
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The map label for this gene is 192289437
Identifier: 192289437
GI number: 192289437
Start: 1073003
End: 1074037
Strand: Reverse
Name: 192289437
Synonym: Rpal_1010
Alternate gene names: NA
Gene position: 1074037-1073003 (Counterclockwise)
Preceding gene: 192289438
Following gene: 192289436
Centisome position: 18.7
GC content: 65.89
Gene sequence:
>1035_bases ATGAACCTCGCTGACTTGAACCAGATCGCTCGCGCCATGGTCGCGCCCGGCAAAGGCATTCTCGCCGCCGACGAGTCCTC GGGGACGATCAAGAAGCGGTTCGACGTCATCGGGGTGGAGTCGACCGAGACCAACCGCCGCGACTATCGCGAGATGCTGT TCCGCTCCAAGGAAGCGATGAGCGACTACGTCTCCGGCGTGATCCTGTACGACGAGACGATCTGGCAGAACGCCGCCGAC GGCACCCCGCTGGTGAAGCTGATCGAGCAGGCCGGCAGCATTCCGGGCATCAAGGTCGACGAGGGCACTCAGCCGCTGCC GAACTGCCCGGGCGAGACCATCACGGTCGGCCTCGACAAGCTCGCCGAGCGGCTCGCTAAGTACTACAAGCAGGGCGCCC GCTTCGCGAAGTGGCGCGCGGTGATCGACATCGATACCGCCCGCGGCGTTCCGAGCCACACCGCGATCATGACCAACGCC CATGCGCTGGCGCGCTACGCGGCGCTGTGCCAGCAGGCCCAGATCGTGCCGATCGTCGAGCCGGAGGTGCTGATGGACGG CGCCCACGACATCGACACCTGCTACAGCATCACCGAATGGGTGCTGAAGGAAACCTTCCAGCAACTGTACTTCCAGCGCG TCGCCCTTGAAGGCATGATCCTGAAGCCGAACATGGCTGTCCCCGGCAAGAAATCGGCTAAGAAGGCGTCGGTGCAGGAA GTCGCCGAGAAAACCGTGAAGCTGCTGAAGGCCTGCGTGCCGTCGGCGGTGCCGGGCATCGCCTTCCTGTCCGGCGGCCA GTCGGACGAAGAAGCGACGGCCCACCTCGATGCCATGAACAAGATCGGTGGCCTGCCCTGGGGCCTCACCTTCTCGTACG GCCGTGCCCTGCAGGCCGCGCCGCAGAAGGCGTGGTCGGGCAAGGCCGAAAACGTCGCGGCCGGTCAGGCCGCGTTCACC CACCGGGCCCGGATGAACTCGCTCGCCGCCAAGGGCGAGTGGAGCGCCGAGCTCGAAACCAAGAAGGCCGCCTGA
Upstream 100 bases:
>100_bases GGCCGCGGTCAATCGCGCCCTCGCCATCTTCCTCGGCATTGTCTAAGACCCTGTCCGAACGGCTTCCCAAACCAACAAGA ACAGCCAAAGGAGAGACGCG
Downstream 100 bases:
>100_bases GCCGTATGAACGCCAAGCCTGCTCCATCGCGTCCGGCGCCGCGCCTGTATCTGGCGACGCCGGTGACTGCCGATCCCGCC GCCGTGGCCGCGGCCCTGCC
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MNLADLNQIARAMVAPGKGILAADESSGTIKKRFDVIGVESTETNRRDYREMLFRSKEAMSDYVSGVILYDETIWQNAAD GTPLVKLIEQAGSIPGIKVDEGTQPLPNCPGETITVGLDKLAERLAKYYKQGARFAKWRAVIDIDTARGVPSHTAIMTNA HALARYAALCQQAQIVPIVEPEVLMDGAHDIDTCYSITEWVLKETFQQLYFQRVALEGMILKPNMAVPGKKSAKKASVQE VAEKTVKLLKACVPSAVPGIAFLSGGQSDEEATAHLDAMNKIGGLPWGLTFSYGRALQAAPQKAWSGKAENVAAGQAAFT HRARMNSLAAKGEWSAELETKKAA
Sequences:
>Translated_344_residues MNLADLNQIARAMVAPGKGILAADESSGTIKKRFDVIGVESTETNRRDYREMLFRSKEAMSDYVSGVILYDETIWQNAAD GTPLVKLIEQAGSIPGIKVDEGTQPLPNCPGETITVGLDKLAERLAKYYKQGARFAKWRAVIDIDTARGVPSHTAIMTNA HALARYAALCQQAQIVPIVEPEVLMDGAHDIDTCYSITEWVLKETFQQLYFQRVALEGMILKPNMAVPGKKSAKKASVQE VAEKTVKLLKACVPSAVPGIAFLSGGQSDEEATAHLDAMNKIGGLPWGLTFSYGRALQAAPQKAWSGKAENVAAGQAAFT HRARMNSLAAKGEWSAELETKKAA >Mature_344_residues MNLADLNQIARAMVAPGKGILAADESSGTIKKRFDVIGVESTETNRRDYREMLFRSKEAMSDYVSGVILYDETIWQNAAD GTPLVKLIEQAGSIPGIKVDEGTQPLPNCPGETITVGLDKLAERLAKYYKQGARFAKWRAVIDIDTARGVPSHTAIMTNA HALARYAALCQQAQIVPIVEPEVLMDGAHDIDTCYSITEWVLKETFQQLYFQRVALEGMILKPNMAVPGKKSAKKASVQE VAEKTVKLLKACVPSAVPGIAFLSGGQSDEEATAHLDAMNKIGGLPWGLTFSYGRALQAAPQKAWSGKAENVAAGQAAFT HRARMNSLAAKGEWSAELETKKAA
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Homo sapiens, GI34577112, Length=332, Percent_Identity=52.710843373494, Blast_Score=342, Evalue=2e-94, Organism=Homo sapiens, GI34577110, Length=332, Percent_Identity=52.710843373494, Blast_Score=342, Evalue=2e-94, Organism=Homo sapiens, GI4557305, Length=332, Percent_Identity=52.710843373494, Blast_Score=342, Evalue=2e-94, Organism=Homo sapiens, GI193794814, Length=332, Percent_Identity=52.710843373494, Blast_Score=342, Evalue=2e-94, Organism=Homo sapiens, GI4885063, Length=341, Percent_Identity=50.1466275659824, Blast_Score=330, Evalue=9e-91, Organism=Homo sapiens, GI40354205, Length=332, Percent_Identity=49.6987951807229, Blast_Score=310, Evalue=1e-84, Organism=Caenorhabditis elegans, GI71983985, Length=331, Percent_Identity=51.6616314199396, Blast_Score=332, Evalue=1e-91, Organism=Caenorhabditis elegans, GI25150450, Length=333, Percent_Identity=50.4504504504504, Blast_Score=330, Evalue=6e-91, Organism=Caenorhabditis elegans, GI71983990, Length=233, Percent_Identity=51.0729613733906, Blast_Score=234, Evalue=7e-62, Organism=Drosophila melanogaster, GI221459619, Length=333, Percent_Identity=52.2522522522522, Blast_Score=339, Evalue=1e-93, Organism=Drosophila melanogaster, GI24650288, Length=333, Percent_Identity=52.2522522522522, Blast_Score=339, Evalue=1e-93, Organism=Drosophila melanogaster, GI24650282, Length=331, Percent_Identity=52.2658610271903, Blast_Score=339, Evalue=2e-93, Organism=Drosophila melanogaster, GI24650280, Length=331, Percent_Identity=52.2658610271903, Blast_Score=339, Evalue=2e-93, Organism=Drosophila melanogaster, GI24650278, Length=331, Percent_Identity=52.2658610271903, Blast_Score=339, Evalue=2e-93, Organism=Drosophila melanogaster, GI45553577, Length=331, Percent_Identity=52.2658610271903, Blast_Score=338, Evalue=3e-93, Organism=Drosophila melanogaster, GI24650304, Length=331, Percent_Identity=45.0151057401813, Blast_Score=300, Evalue=8e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 37223; Mature: 37223
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLADLNQIARAMVAPGKGILAADESSGTIKKRFDVIGVESTETNRRDYREMLFRSKEAM CCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHEEEECCCCCCHHHHHHHHHHHHHHHH SDYVSGVILYDETIWQNAADGTPLVKLIEQAGSIPGIKVDEGTQPLPNCPGETITVGLDK HHHHCEEEEECHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEECHHH LAERLAKYYKQGARFAKWRAVIDIDTARGVPSHTAIMTNAHALARYAALCQQAQIVPIVE HHHHHHHHHHHCCHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECC PEVLMDGAHDIDTCYSITEWVLKETFQQLYFQRVALEGMILKPNMAVPGKKSAKKASVQE HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHH VAEKTVKLLKACVPSAVPGIAFLSGGQSDEEATAHLDAMNKIGGLPWGLTFSYGRALQAA HHHHHHHHHHHHHHHCCCCHHEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC PQKAWSGKAENVAAGQAAFTHRARMNSLAAKGEWSAELETKKAA HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNLADLNQIARAMVAPGKGILAADESSGTIKKRFDVIGVESTETNRRDYREMLFRSKEAM CCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHEEEECCCCCCHHHHHHHHHHHHHHHH SDYVSGVILYDETIWQNAADGTPLVKLIEQAGSIPGIKVDEGTQPLPNCPGETITVGLDK HHHHCEEEEECHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEECHHH LAERLAKYYKQGARFAKWRAVIDIDTARGVPSHTAIMTNAHALARYAALCQQAQIVPIVE HHHHHHHHHHHCCHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECC PEVLMDGAHDIDTCYSITEWVLKETFQQLYFQRVALEGMILKPNMAVPGKKSAKKASVQE HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHH VAEKTVKLLKACVPSAVPGIAFLSGGQSDEEATAHLDAMNKIGGLPWGLTFSYGRALQAA HHHHHHHHHHHHHHHCCCCHHEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC PQKAWSGKAENVAAGQAAFTHRARMNSLAAKGEWSAELETKKAA HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]