Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
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Accession | NC_011004 |
Length | 5,744,041 |
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The map label for this gene is 192289043
Identifier: 192289043
GI number: 192289043
Start: 668215
End: 668994
Strand: Reverse
Name: 192289043
Synonym: Rpal_0613
Alternate gene names: NA
Gene position: 668994-668215 (Counterclockwise)
Preceding gene: 192289046
Following gene: 192289037
Centisome position: 11.65
GC content: 69.23
Gene sequence:
>780_bases ATGTCGGTCATGACCATCGACGTCGTGGATCTGCGAGAGTTCTACAGTAGCCGGCTCGGCATCGTGGCACGACGGCTGAT CAACCGCGGCATCCAGTCGCGATGGCCGGATGCGCGCGGCGATCGCGTGCTCGGCTTCGGCTATCCGACGCCGTATCTCG GCCTGTTCCGCGACAGGTGCGAACGCTGCATCGCCTTCATGCCGGCGGCCCAGGGCGTGCTGAAATGGCCAACCGCGCGG TCGACGCTGTCCTCGCTGGTCGACGAACACGCGTTGCCGCTGCCGGACGCCGCGGTCGATCGCATCCTGCTGGTGCATGC GTTGGAGATGTCCGACGATCCCGAACGGCTGCTGCGCGAGGTGTGGCGGGTGCTGGCGCCGGCCGGTCGGCTGCTCGCGA TCGTCCCCAATCGCCGCGGCGTTTGGGCGCGGCTCGACAACACCCCGTTCGGTCACGGCCGGCCGTATTCGCGCTCGCAG ATCGCCGACCTGCTGCGGCGAACCTGGTTCACCCCGACGGCCTGGAGCGAGGCGCTGTTCGTGCCTCCTCTGGGGCAAGG CTGGCTGCTGCGCTCGGCGCCGGCCTGGGAGCGGATCGGCGCATCGACCTCCATGCCGTTCGCCGGCGTGCACGTAGTCG AAGCCACCAAACAGGTGGTCCGGGCGCAGCCGGTCAAGCGCGAACGGATTCGGTTGATTCCGTCGCTGGAGCCGTCGCTG GTGCCGTCACCAACTCCGATGCAGGCCGACGAGCCGGACGCGCCGCCGCTGCTGCGCTGA
Upstream 100 bases:
>100_bases CGAACTCTAACATGGGGGCAGACCGGGACGAAATGAAGCGGTCACAGCCTCGTAAACCAAGCAGGGTGTGGCTTTGCCGG ACCATACGACGGCGTGGTAA
Downstream 100 bases:
>100_bases TACGGCATCGACTGAACCAAGACGTGCCGAAACGACAAAGGCCGCACCAACCGGCGCGGCCTCGTCTGATTTGATCGACC TCTTGCGGCCGGTCGCGAAG
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSVMTIDVVDLREFYSSRLGIVARRLINRGIQSRWPDARGDRVLGFGYPTPYLGLFRDRCERCIAFMPAAQGVLKWPTAR STLSSLVDEHALPLPDAAVDRILLVHALEMSDDPERLLREVWRVLAPAGRLLAIVPNRRGVWARLDNTPFGHGRPYSRSQ IADLLRRTWFTPTAWSEALFVPPLGQGWLLRSAPAWERIGASTSMPFAGVHVVEATKQVVRAQPVKRERIRLIPSLEPSL VPSPTPMQADEPDAPPLLR
Sequences:
>Translated_259_residues MSVMTIDVVDLREFYSSRLGIVARRLINRGIQSRWPDARGDRVLGFGYPTPYLGLFRDRCERCIAFMPAAQGVLKWPTAR STLSSLVDEHALPLPDAAVDRILLVHALEMSDDPERLLREVWRVLAPAGRLLAIVPNRRGVWARLDNTPFGHGRPYSRSQ IADLLRRTWFTPTAWSEALFVPPLGQGWLLRSAPAWERIGASTSMPFAGVHVVEATKQVVRAQPVKRERIRLIPSLEPSL VPSPTPMQADEPDAPPLLR >Mature_258_residues SVMTIDVVDLREFYSSRLGIVARRLINRGIQSRWPDARGDRVLGFGYPTPYLGLFRDRCERCIAFMPAAQGVLKWPTARS TLSSLVDEHALPLPDAAVDRILLVHALEMSDDPERLLREVWRVLAPAGRLLAIVPNRRGVWARLDNTPFGHGRPYSRSQI ADLLRRTWFTPTAWSEALFVPPLGQGWLLRSAPAWERIGASTSMPFAGVHVVEATKQVVRAQPVKRERIRLIPSLEPSLV PSPTPMQADEPDAPPLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 29091; Mature: 28960
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVMTIDVVDLREFYSSRLGIVARRLINRGIQSRWPDARGDRVLGFGYPTPYLGLFRDRC CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHH ERCIAFMPAAQGVLKWPTARSTLSSLVDEHALPLPDAAVDRILLVHALEMSDDPERLLRE HHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH VWRVLAPAGRLLAIVPNRRGVWARLDNTPFGHGRPYSRSQIADLLRRTWFTPTAWSEALF HHHHHCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEE VPPLGQGWLLRSAPAWERIGASTSMPFAGVHVVEATKQVVRAQPVKRERIRLIPSLEPSL CCCCCCCCEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC VPSPTPMQADEPDAPPLLR CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVMTIDVVDLREFYSSRLGIVARRLINRGIQSRWPDARGDRVLGFGYPTPYLGLFRDRC CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHH ERCIAFMPAAQGVLKWPTARSTLSSLVDEHALPLPDAAVDRILLVHALEMSDDPERLLRE HHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH VWRVLAPAGRLLAIVPNRRGVWARLDNTPFGHGRPYSRSQIADLLRRTWFTPTAWSEALF HHHHHCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEE VPPLGQGWLLRSAPAWERIGASTSMPFAGVHVVEATKQVVRAQPVKRERIRLIPSLEPSL CCCCCCCCEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC VPSPTPMQADEPDAPPLLR CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6209404 [H]