Click here to switch to the map view.

The map label for this gene is 192288971

Identifier: 192288971

GI number: 192288971

Start: 592600

End: 593718

Strand: Reverse

Name: 192288971

Synonym: Rpal_0541

Alternate gene names: NA

Gene position: 593718-592600 (Counterclockwise)

Preceding gene: 192288973

Following gene: 192288969

Centisome position: 10.34

GC content: 64.16

Gene sequence:

>1119_bases
TTGCGACTGGTCAGCGGCATTCAGGATCATTGCGACGTTCGAGGACTGCTCGATCACGACGCGTACAGTGGCGAATTCAG
CAGATTGCTATGCGTGGCGCAGAATGAAGGCGTCAGCTTTTCTGAATGCGTGGCCGCCGCGAAACTGATCCGATCGAGCA
ATGGGCCCGGTTGGCGGCAGGCTTGGGAAGAACTCGCCAGATCACACGTGCAGCGCGCCGAAGAGGCTCGTCGGACCGGC
AATGAACCGGAGGCGCAAAAGAGCTGGTTGCATGCGGCGAACTACTTCATGGCCGCGGCAATCGAGAGCGGTCCCGAGGG
CGCAGAGCCAGCCTTGGGGGCTTTGGCCCGAAGCTGCCTGCACAACTATTTGGCACACCTGACGCCTCAGGGCGAAACCG
TCGCAATACCCTGGCTCGAACCGCGATCGCTCGAGGGGTTCTATCTGCCGGTCGGGACTTACAGCGCTGAAACCGGCCCC
GTCGTGGTCTGTATCGCCGAGACCCGGCGTACCAAGGAAGAGATTCTCTCGCTCGTTCTACGCTCCGCCCGGAAACGTGG
CATGACCTTGCTGTGCGTGGGCCTGCCCGATGAGCCGCCATCGTCGCGCGCCGGGCCGGAGACCGGGATCCCTGCGATCC
TCGACTACCTGATCGATGGTCGCGGGATTGATGCGAAACGGATCGCTGTGATCAGCGATGGCAGCCCGTCGTCGCTCGTG
ACCCGAGGCATCGCGCTCGACGGTCGAATCGCCGCCGCTGTGTGCGACGGCGGCCTCTGGGATTTATGGGTGGCCCGTCA
GACCGAAGCCTGCGGCGCGGCGCTCGGCATGGTTCAGGGTTGCGCCCGGCGGCCGGCGGTGAGCTGTCCGATGCTGGTGC
CGCTGCTGGCGAGCGAGGGCATCGAGCCGGGTCACGCCCGCCAACTGCTGACCGAACATCACCCCGGAAACCGCGACATC
CTGCTGAAGGTGTTCGGCGAAACGAGCAGCGGCCCGTGGACGCTGAACGGCTACGATCCAATTCTGGTGGCCGATTTCGT
GTTCGACTGGGTCGGCCAGCAATTGAAAGCCGCGACTGGAGACGCCGACTGCATTCGCCGGCTGGAGTCTCGGCTATAG

Upstream 100 bases:

>100_bases
TAGGACCCGCTTCGCGAGTGACAGCTGCTCGCAATTCAGTTATTCGATCAACTAAGTAATTTAACGAAGTCGGTCGAGGT
AAACGGGAGGGGTCGCAGTC

Downstream 100 bases:

>100_bases
GCCGCTGGCGAGTTTGACGGTCGCCTTTTCCAGGCGGTTCTGTAGGTCGCCGAGCTGGGACGTGAGCTGTTCCAGCGCCT
CGCCGCTGATGTCTTCAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MRLVSGIQDHCDVRGLLDHDAYSGEFSRLLCVAQNEGVSFSECVAAAKLIRSSNGPGWRQAWEELARSHVQRAEEARRTG
NEPEAQKSWLHAANYFMAAAIESGPEGAEPALGALARSCLHNYLAHLTPQGETVAIPWLEPRSLEGFYLPVGTYSAETGP
VVVCIAETRRTKEEILSLVLRSARKRGMTLLCVGLPDEPPSSRAGPETGIPAILDYLIDGRGIDAKRIAVISDGSPSSLV
TRGIALDGRIAAAVCDGGLWDLWVARQTEACGAALGMVQGCARRPAVSCPMLVPLLASEGIEPGHARQLLTEHHPGNRDI
LLKVFGETSSGPWTLNGYDPILVADFVFDWVGQQLKAATGDADCIRRLESRL

Sequences:

>Translated_372_residues
MRLVSGIQDHCDVRGLLDHDAYSGEFSRLLCVAQNEGVSFSECVAAAKLIRSSNGPGWRQAWEELARSHVQRAEEARRTG
NEPEAQKSWLHAANYFMAAAIESGPEGAEPALGALARSCLHNYLAHLTPQGETVAIPWLEPRSLEGFYLPVGTYSAETGP
VVVCIAETRRTKEEILSLVLRSARKRGMTLLCVGLPDEPPSSRAGPETGIPAILDYLIDGRGIDAKRIAVISDGSPSSLV
TRGIALDGRIAAAVCDGGLWDLWVARQTEACGAALGMVQGCARRPAVSCPMLVPLLASEGIEPGHARQLLTEHHPGNRDI
LLKVFGETSSGPWTLNGYDPILVADFVFDWVGQQLKAATGDADCIRRLESRL
>Mature_372_residues
MRLVSGIQDHCDVRGLLDHDAYSGEFSRLLCVAQNEGVSFSECVAAAKLIRSSNGPGWRQAWEELARSHVQRAEEARRTG
NEPEAQKSWLHAANYFMAAAIESGPEGAEPALGALARSCLHNYLAHLTPQGETVAIPWLEPRSLEGFYLPVGTYSAETGP
VVVCIAETRRTKEEILSLVLRSARKRGMTLLCVGLPDEPPSSRAGPETGIPAILDYLIDGRGIDAKRIAVISDGSPSSLV
TRGIALDGRIAAAVCDGGLWDLWVARQTEACGAALGMVQGCARRPAVSCPMLVPLLASEGIEPGHARQLLTEHHPGNRDI
LLKVFGETSSGPWTLNGYDPILVADFVFDWVGQQLKAATGDADCIRRLESRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40052; Mature: 40052

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVSGIQDHCDVRGLLDHDAYSGEFSRLLCVAQNEGVSFSECVAAAKLIRSSNGPGWRQ
CCCHHCHHHHCCCCHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHH
AWEELARSHVQRAEEARRTGNEPEAQKSWLHAANYFMAAAIESGPEGAEPALGALARSCL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
HNYLAHLTPQGETVAIPWLEPRSLEGFYLPVGTYSAETGPVVVCIAETRRTKEEILSLVL
HHHHHHCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEECCHHCCHHHHHHHHH
RSARKRGMTLLCVGLPDEPPSSRAGPETGIPAILDYLIDGRGIDAKRIAVISDGSPSSLV
HHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHH
TRGIALDGRIAAAVCDGGLWDLWVARQTEACGAALGMVQGCARRPAVSCPMLVPLLASEG
HHCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
IEPGHARQLLTEHHPGNRDILLKVFGETSSGPWTLNGYDPILVADFVFDWVGQQLKAATG
CCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCC
DADCIRRLESRL
CHHHHHHHHHCC
>Mature Secondary Structure
MRLVSGIQDHCDVRGLLDHDAYSGEFSRLLCVAQNEGVSFSECVAAAKLIRSSNGPGWRQ
CCCHHCHHHHCCCCHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHH
AWEELARSHVQRAEEARRTGNEPEAQKSWLHAANYFMAAAIESGPEGAEPALGALARSCL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
HNYLAHLTPQGETVAIPWLEPRSLEGFYLPVGTYSAETGPVVVCIAETRRTKEEILSLVL
HHHHHHCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEECCHHCCHHHHHHHHH
RSARKRGMTLLCVGLPDEPPSSRAGPETGIPAILDYLIDGRGIDAKRIAVISDGSPSSLV
HHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHH
TRGIALDGRIAAAVCDGGLWDLWVARQTEACGAALGMVQGCARRPAVSCPMLVPLLASEG
HHCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
IEPGHARQLLTEHHPGNRDILLKVFGETSSGPWTLNGYDPILVADFVFDWVGQQLKAATG
CCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCC
DADCIRRLESRL
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA