Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
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Accession | NC_011004 |
Length | 5,744,041 |
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The map label for this gene is 192288830
Identifier: 192288830
GI number: 192288830
Start: 428008
End: 428508
Strand: Reverse
Name: 192288830
Synonym: Rpal_0399
Alternate gene names: NA
Gene position: 428508-428008 (Counterclockwise)
Preceding gene: 192288831
Following gene: 192288829
Centisome position: 7.46
GC content: 67.86
Gene sequence:
>501_bases ATGGCATTGCTCGGCCGCCTGTTCGTGATCGCGATCGGCTTTCTGCTCGCCTCGATCGCCGCCGGCCTGGTGGTGGTCGG GATGCTGCTGTTTCCCGAGCTGAGCCAGATCGCCGACGGCCCGATCGACCCCGACGCGCTGAATATCATGATGGGCTTCG GCTTCATCTTCGTGTCCGGCTTCGCCCTGCTGCCGGCGCTGGTGGTGGTGCTGATCACCGAAGCGTTCTCGATCCGCAGC GCGCTGGCCTATGCGATCGGCGGGGGCCTGGTCGGAGTGGCCTGCTATCTTGGCCTGGTGCCGTTCGATCCCGCGACGCT GCATTTCGATGGCATCATCCGCCGCCACCTCGAAATCATGACCGGGGCCGGCATCGTCGGCGGCATGGTGTATTGGCTGG TCGCTGGCCGCAACGCCGGCGCCTGGCGCGATCCGCCGCGCCGGCGCGCGCCCTTGCCGCCTTCCCAACCCGAACCGCCT CCGGTAAACCGCGCCCCATGA
Upstream 100 bases:
>100_bases ACACCGCAGTTCATCCGCTGGTGAGCGCGATCCGCGCCGAACTCGACAACGACACAAGGGCGCGGATGGCAGCGCAGCAA GCTTCCGGAGCACCCCACTG
Downstream 100 bases:
>100_bases ACCGCAACGGACTTCTCATCGCGCTGGCGCTGTTCGCCGGCATCGGGCTGACGTTCGGTCTGTTTCCGAGCCTCGACCTA TGGCTGGCCGGCCTGTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MALLGRLFVIAIGFLLASIAAGLVVVGMLLFPELSQIADGPIDPDALNIMMGFGFIFVSGFALLPALVVVLITEAFSIRS ALAYAIGGGLVGVACYLGLVPFDPATLHFDGIIRRHLEIMTGAGIVGGMVYWLVAGRNAGAWRDPPRRRAPLPPSQPEPP PVNRAP
Sequences:
>Translated_166_residues MALLGRLFVIAIGFLLASIAAGLVVVGMLLFPELSQIADGPIDPDALNIMMGFGFIFVSGFALLPALVVVLITEAFSIRS ALAYAIGGGLVGVACYLGLVPFDPATLHFDGIIRRHLEIMTGAGIVGGMVYWLVAGRNAGAWRDPPRRRAPLPPSQPEPP PVNRAP >Mature_165_residues ALLGRLFVIAIGFLLASIAAGLVVVGMLLFPELSQIADGPIDPDALNIMMGFGFIFVSGFALLPALVVVLITEAFSIRSA LAYAIGGGLVGVACYLGLVPFDPATLHFDGIIRRHLEIMTGAGIVGGMVYWLVAGRNAGAWRDPPRRRAPLPPSQPEPPP VNRAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17458; Mature: 17327
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLGRLFVIAIGFLLASIAAGLVVVGMLLFPELSQIADGPIDPDALNIMMGFGFIFVSG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH FALLPALVVVLITEAFSIRSALAYAIGGGLVGVACYLGLVPFDPATLHFDGIIRRHLEIM HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH TGAGIVGGMVYWLVAGRNAGAWRDPPRRRAPLPPSQPEPPPVNRAP HCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ALLGRLFVIAIGFLLASIAAGLVVVGMLLFPELSQIADGPIDPDALNIMMGFGFIFVSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH FALLPALVVVLITEAFSIRSALAYAIGGGLVGVACYLGLVPFDPATLHFDGIIRRHLEIM HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH TGAGIVGGMVYWLVAGRNAGAWRDPPRRRAPLPPSQPEPPPVNRAP HCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA