Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
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Accession | NC_010997 |
Length | 1,091,523 |
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The map label for this gene is glnH [C]
Identifier: 190894986
GI number: 190894986
Start: 704675
End: 705454
Strand: Reverse
Name: glnH [C]
Synonym: RHECIAT_PC0000652
Alternate gene names: 190894986
Gene position: 705454-704675 (Counterclockwise)
Preceding gene: 190894990
Following gene: 190894985
Centisome position: 64.63
GC content: 63.33
Gene sequence:
>780_bases ATGGCAGGTCTTTCCGCAACCGCCGCCCACGCCCAGACCGCCGAGGGATATTGGCAGGGCGTGCAGAAGGCAGGCGCTTT GCGTTGTGGCGCGGCTGTAGCGCCGCCCTATGTCATGCGCGATCCGGCGACGGGCGAGTACACCGGCTTCTTCGCCGATC TCTGCAAGGAGTTTGCCGACGTCCTCAAGGTGAAGCCTGAATTCGTCGATACCACCTGGGACAATATCGTCGCCGGTCTG CAGGCGGGCAAATGGGATCTGTCGCTCGCGCTTAACCGGACGCCGGCGCGCGCCATGGCCGTGCAGTTCTCGATCCCGGC GATGGAGTACCAGATCTCGCTCGCCTACAATAAAAACAATCCGAAGATCGCGGCCGGCGTCGCTTCGGTGGCCGATATAG ACAAGGCGGGCGTAACTCTTGCGGTCATGTCAGGCACGGCCCAAGACAAGGCCATTTCCGCGGCGGTCAAGAACGCCACG ATCATGCGCCTGCCCGGCAACGACGAGACCCGCCTGGCGGTCACCTCGAAGCGCGCCGACATCCTGGTCGACGCCTCCGA CACCAACCAGCTCTTCACCCAGTCGAACCCGGATTGGGCGGTTGCGCTCAACCCGACGCCGGCCCTTGCCAAACAGGGTG TCGCTTTCGGCCTGCCGCATCAGCTTTCGGCCGCCGACGTCGAAGTGATCAATATCTTCCTCGAAGAGAGGGTCGCCACC GGCCATGTCGACGAGCTGATCCGCAAAGCCGTCGACGAAGTCCTCAAGGGCGCGAAGTAA
Upstream 100 bases:
>100_bases CCGACGAGTGGAACCGCGCGCTTCGCGCACAACAAAAGAGGAATGCCCAATGCTTTCTTTGATAACGTCCGCCCTGCGGG CGCTGCCCGCGCTCGCCCTG
Downstream 100 bases:
>100_bases CCTCGCTGGGGCCGGTGCGACGATCGTCCCGGCCCTTTCAAGCTTCGATCATCGGAGATTGGCCATGACCACGTCCTTCA GCCTTCCCCTCGTGAAAATG
Product: putative ABC transporter substrate-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: Amino Acid ABC Transporter; Signal Peptide; Cyclohexadienyl Dehydratase Periplasmic; Amino Acid ABC Transporter Periplasmic Protein; Soluble Lytic Transglycosylase; Prephenate Dehydratase
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MAGLSATAAHAQTAEGYWQGVQKAGALRCGAAVAPPYVMRDPATGEYTGFFADLCKEFADVLKVKPEFVDTTWDNIVAGL QAGKWDLSLALNRTPARAMAVQFSIPAMEYQISLAYNKNNPKIAAGVASVADIDKAGVTLAVMSGTAQDKAISAAVKNAT IMRLPGNDETRLAVTSKRADILVDASDTNQLFTQSNPDWAVALNPTPALAKQGVAFGLPHQLSAADVEVINIFLEERVAT GHVDELIRKAVDEVLKGAK
Sequences:
>Translated_259_residues MAGLSATAAHAQTAEGYWQGVQKAGALRCGAAVAPPYVMRDPATGEYTGFFADLCKEFADVLKVKPEFVDTTWDNIVAGL QAGKWDLSLALNRTPARAMAVQFSIPAMEYQISLAYNKNNPKIAAGVASVADIDKAGVTLAVMSGTAQDKAISAAVKNAT IMRLPGNDETRLAVTSKRADILVDASDTNQLFTQSNPDWAVALNPTPALAKQGVAFGLPHQLSAADVEVINIFLEERVAT GHVDELIRKAVDEVLKGAK >Mature_258_residues AGLSATAAHAQTAEGYWQGVQKAGALRCGAAVAPPYVMRDPATGEYTGFFADLCKEFADVLKVKPEFVDTTWDNIVAGLQ AGKWDLSLALNRTPARAMAVQFSIPAMEYQISLAYNKNNPKIAAGVASVADIDKAGVTLAVMSGTAQDKAISAAVKNATI MRLPGNDETRLAVTSKRADILVDASDTNQLFTQSNPDWAVALNPTPALAKQGVAFGLPHQLSAADVEVINIFLEERVATG HVDELIRKAVDEVLKGAK
Specific function: Involved In A Glutamine-Transport System Glnhpq. [C]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27412; Mature: 27281
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLSATAAHAQTAEGYWQGVQKAGALRCGAAVAPPYVMRDPATGEYTGFFADLCKEFAD CCCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH VLKVKPEFVDTTWDNIVAGLQAGKWDLSLALNRTPARAMAVQFSIPAMEYQISLAYNKNN HHHCCCHHHCCCHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCCEEEEEEEEEECCC PKIAAGVASVADIDKAGVTLAVMSGTAQDKAISAAVKNATIMRLPGNDETRLAVTSKRAD CEEEHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCEEEECCCCCCCEEEEEECCCE ILVDASDTNQLFTQSNPDWAVALNPTPALAKQGVAFGLPHQLSAADVEVINIFLEERVAT EEEECCCCCCCEECCCCCEEEEECCCHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHCC GHVDELIRKAVDEVLKGAK CCHHHHHHHHHHHHHCCCC >Mature Secondary Structure AGLSATAAHAQTAEGYWQGVQKAGALRCGAAVAPPYVMRDPATGEYTGFFADLCKEFAD CCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH VLKVKPEFVDTTWDNIVAGLQAGKWDLSLALNRTPARAMAVQFSIPAMEYQISLAYNKNN HHHCCCHHHCCCHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCCEEEEEEEEEECCC PKIAAGVASVADIDKAGVTLAVMSGTAQDKAISAAVKNATIMRLPGNDETRLAVTSKRAD CEEEHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCEEEECCCCCCCEEEEEECCCE ILVDASDTNQLFTQSNPDWAVALNPTPALAKQGVAFGLPHQLSAADVEVINIFLEERVAT EEEECCCCCCCEECCCCCEEEEECCCHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHCC GHVDELIRKAVDEVLKGAK CCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA