Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
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Accession | NC_010997 |
Length | 1,091,523 |
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The map label for this gene is glnP [H]
Identifier: 190894983
GI number: 190894983
Start: 702478
End: 703146
Strand: Reverse
Name: glnP [H]
Synonym: RHECIAT_PC0000649
Alternate gene names: 190894983
Gene position: 703146-702478 (Counterclockwise)
Preceding gene: 190894984
Following gene: 190894982
Centisome position: 64.42
GC content: 61.58
Gene sequence:
>669_bases ATGATGACGCTCGATTTCTCGATCCTGCTGCGCTTCGAAAACGCGCTGCTCCTTGGCCTGTGGATGACGATCAAGCTGAC GATCATCTGCGTCGTGCTTGGATGCTCTCTCGGCTTCCTCGTCGGCCTGGCGCGCGCGTCGCGCAATCTGGCGCTTCGCG CCATTGCGGGCACCTATGTCGAATTCTTCCGCGGCACGCCGGTGCTCATCCAGCTCTTCTGGATCTTCTTCTGCCTGCCG CTGATCCTCGGTGTCGAGCTTTCGAATCTCGCATCGGGTGTCATCACGCTGACCCTCTATATGGGCGCAATAACGAGCGA AACTTTCCGGGCGAGCCTCAAATCGATCGGCCGGGAGCAGTTGGATGCCTGTGTCGCCCTCGGCCTGCCGCAGAGGGTCC AGGTCGTCAACGTCGTGCTGCCGCAGGCGGTGCCGCGGGCCATCCCGACGCTGCTGTCGAACTGCGTCAGCCTGTTCAAG GAAAGCGCGCTCGTCTCCGCCGTCGGCATGGCCGACCTGATGTTCGTCGGCCAGAACATTTCGAACAATACCGCCCGTCC GGTCGAAGTGCTGACGGTCGTCGCCCTGATCTATTTCGTCATCGCCTTCCCCCTCACGCGGGCGGTCTCCCTCATGGAGG GACGCATTCTCAAGAAGCTCGCAATCTGA
Upstream 100 bases:
>100_bases CGTCGTCGCCCTCATCTATTTCGCCGTGTCTTTCCCGATCACCCAGATCGTCGGCCTGCTCGAACGCCGCCGCCAGATCC TCGTCAGCTAGGAGGCCAGC
Downstream 100 bases:
>100_bases AAACCGTCGTTCCCAGGACAGGAGAATCCCATGAAACTTTCCGGCGTCATACCCGCCCTCATCACCCCCTTCGACGCGAA CAACAGGATCGACTTCAAGG
Product: putative amino acid ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MMTLDFSILLRFENALLLGLWMTIKLTIICVVLGCSLGFLVGLARASRNLALRAIAGTYVEFFRGTPVLIQLFWIFFCLP LILGVELSNLASGVITLTLYMGAITSETFRASLKSIGREQLDACVALGLPQRVQVVNVVLPQAVPRAIPTLLSNCVSLFK ESALVSAVGMADLMFVGQNISNNTARPVEVLTVVALIYFVIAFPLTRAVSLMEGRILKKLAI
Sequences:
>Translated_222_residues MMTLDFSILLRFENALLLGLWMTIKLTIICVVLGCSLGFLVGLARASRNLALRAIAGTYVEFFRGTPVLIQLFWIFFCLP LILGVELSNLASGVITLTLYMGAITSETFRASLKSIGREQLDACVALGLPQRVQVVNVVLPQAVPRAIPTLLSNCVSLFK ESALVSAVGMADLMFVGQNISNNTARPVEVLTVVALIYFVIAFPLTRAVSLMEGRILKKLAI >Mature_222_residues MMTLDFSILLRFENALLLGLWMTIKLTIICVVLGCSLGFLVGLARASRNLALRAIAGTYVEFFRGTPVLIQLFWIFFCLP LILGVELSNLASGVITLTLYMGAITSETFRASLKSIGREQLDACVALGLPQRVQVVNVVLPQAVPRAIPTLLSNCVSLFK ESALVSAVGMADLMFVGQNISNNTARPVEVLTVVALIYFVIAFPLTRAVSLMEGRILKKLAI
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788226, Length=207, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1786873, Length=222, Percent_Identity=29.7297297297297, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1787030, Length=216, Percent_Identity=28.2407407407407, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI87082239, Length=220, Percent_Identity=28.1818181818182, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1788645, Length=211, Percent_Identity=25.5924170616114, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1786874, Length=239, Percent_Identity=27.6150627615063, Blast_Score=76, Evalue=1e-15, Organism=Escherichia coli, GI1788646, Length=203, Percent_Identity=26.6009852216749, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787087, Length=222, Percent_Identity=26.1261261261261, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI48994930, Length=166, Percent_Identity=28.3132530120482, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1787086, Length=218, Percent_Identity=22.9357798165138, Blast_Score=60, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24121; Mature: 24121
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTLDFSILLRFENALLLGLWMTIKLTIICVVLGCSLGFLVGLARASRNLALRAIAGTYV CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFFRGTPVLIQLFWIFFCLPLILGVELSNLASGVITLTLYMGAITSETFRASLKSIGREQ HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LDACVALGLPQRVQVVNVVLPQAVPRAIPTLLSNCVSLFKESALVSAVGMADLMFVGQNI HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SNNTARPVEVLTVVALIYFVIAFPLTRAVSLMEGRILKKLAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMTLDFSILLRFENALLLGLWMTIKLTIICVVLGCSLGFLVGLARASRNLALRAIAGTYV CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFFRGTPVLIQLFWIFFCLPLILGVELSNLASGVITLTLYMGAITSETFRASLKSIGREQ HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LDACVALGLPQRVQVVNVVLPQAVPRAIPTLLSNCVSLFKESALVSAVGMADLMFVGQNI HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SNNTARPVEVLTVVALIYFVIAFPLTRAVSLMEGRILKKLAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA