Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190571692
Identifier: 190571692
GI number: 190571692
Start: 1398323
End: 1399459
Strand: Reverse
Name: 190571692
Synonym: WPa_1319
Alternate gene names: NA
Gene position: 1399459-1398323 (Counterclockwise)
Preceding gene: 190571693
Following gene: 190571686
Centisome position: 94.4
GC content: 32.45
Gene sequence:
>1137_bases ATGGACTTACCATTCTGTCAAAAGCAAAATCCAACTTTCTACAGGCAAATAGTTACTAATCTGCTACGGTGGAGTGACTC TTATGATACACCTAGCAGAGATTATTTAGAAGTTGCACAATACCTGTCAAGTCTTGGGTTTGTAAATTTAAGAGAATATT ACTTTATAATCTGTGCTAATGATGAAGATGAGTTTGATTTTCATGTAATAAATCCTTTCTGCAACAATAGATTAGAAATT GTCAGCGATTATGATGAAGATTATGATAACCCAATAATGTGTGACCTCTGTGAACGTGATATTTTACCTGATACTTATAA AAAACAGCGTTACTTTTCTTTAGAGGTAAAAGTTAATCATTTGAAAGTTATAGAATGGTTTGAAAAGCAATTAGCAAGTT TAAAGATTACTTGTAATAAAGTAGCAACCGGAGTTTATTATGTTATTGTTGACACAAGCCTTATCAGCTTAATTATTCCC GAATGCTGTCCTGATAACTCATACTCTGCTGTGGATAAGTTAAAAACCACCCCTACTGCTTTAATAACTTTTAATAAGGA GAGTCTTAAGCCACCACTGAATCTACACATTGTTCCTATAGCAGATCTAATTTGCGAAGATCAAAGTTTAAATGAAGTAT TGCATCAAACAGTAGAAAAAGGAGTACCAGAATTATTACCTAATGTTTCTTTTCAGGCATTCAATTGCTATTCTTACATT CCATTGCAACAGACTAAGTCTACTCCAGCAGAAAAGACTTTTCAGCTCCATATTAAAGGCAATGACATTTGTGTTAATGG TATAGGAGTTATCGAAACACAGTCAAAGTCTGGAAGAATATTTTTTATTTTCTTAGATCAATTTTTTCATGACTTTAAAA GTGGAATTTCTCCAGAGCAATACAAAACTTTAAACGTTGGAGAAATTGCAAATCGCTTAGAAAACATTCACGATGTTGAA CAACAAATTCGCAAACCAATAAATAGAATGCAAAAAACTATAGCAGAGAAATTGGCTATAACTTTAGGTTTAAATGTCAA AAAAGACGATATTATTCAAACTCTGCCATGGTCAGGGATAGGTACTAAGGAATATGGCTACAGGCTTAATCCTTTTACTA TTGTTCTTAAAAAATGA
Upstream 100 bases:
>100_bases TCTTTTCATGCCAATACAGACTATATAGCGATCAATTATTCAGAACACGTACTTGATAAAAAAGAACGTGAAGATTTTAA GTTAATGTTTTCCAATACTT
Downstream 100 bases:
>100_bases GTGTTATTAAATATCTCTCCTCGTTAAATGCTCAGCCACTTTCATAACTTTTACGCGCTCTGGTATTTCTTTTTCATAGA ATTTAATATAACCTGAAGCA
Product: putative phage related protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MDLPFCQKQNPTFYRQIVTNLLRWSDSYDTPSRDYLEVAQYLSSLGFVNLREYYFIICANDEDEFDFHVINPFCNNRLEI VSDYDEDYDNPIMCDLCERDILPDTYKKQRYFSLEVKVNHLKVIEWFEKQLASLKITCNKVATGVYYVIVDTSLISLIIP ECCPDNSYSAVDKLKTTPTALITFNKESLKPPLNLHIVPIADLICEDQSLNEVLHQTVEKGVPELLPNVSFQAFNCYSYI PLQQTKSTPAEKTFQLHIKGNDICVNGIGVIETQSKSGRIFFIFLDQFFHDFKSGISPEQYKTLNVGEIANRLENIHDVE QQIRKPINRMQKTIAEKLAITLGLNVKKDDIIQTLPWSGIGTKEYGYRLNPFTIVLKK
Sequences:
>Translated_378_residues MDLPFCQKQNPTFYRQIVTNLLRWSDSYDTPSRDYLEVAQYLSSLGFVNLREYYFIICANDEDEFDFHVINPFCNNRLEI VSDYDEDYDNPIMCDLCERDILPDTYKKQRYFSLEVKVNHLKVIEWFEKQLASLKITCNKVATGVYYVIVDTSLISLIIP ECCPDNSYSAVDKLKTTPTALITFNKESLKPPLNLHIVPIADLICEDQSLNEVLHQTVEKGVPELLPNVSFQAFNCYSYI PLQQTKSTPAEKTFQLHIKGNDICVNGIGVIETQSKSGRIFFIFLDQFFHDFKSGISPEQYKTLNVGEIANRLENIHDVE QQIRKPINRMQKTIAEKLAITLGLNVKKDDIIQTLPWSGIGTKEYGYRLNPFTIVLKK >Mature_378_residues MDLPFCQKQNPTFYRQIVTNLLRWSDSYDTPSRDYLEVAQYLSSLGFVNLREYYFIICANDEDEFDFHVINPFCNNRLEI VSDYDEDYDNPIMCDLCERDILPDTYKKQRYFSLEVKVNHLKVIEWFEKQLASLKITCNKVATGVYYVIVDTSLISLIIP ECCPDNSYSAVDKLKTTPTALITFNKESLKPPLNLHIVPIADLICEDQSLNEVLHQTVEKGVPELLPNVSFQAFNCYSYI PLQQTKSTPAEKTFQLHIKGNDICVNGIGVIETQSKSGRIFFIFLDQFFHDFKSGISPEQYKTLNVGEIANRLENIHDVE QQIRKPINRMQKTIAEKLAITLGLNVKKDDIIQTLPWSGIGTKEYGYRLNPFTIVLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43633; Mature: 43633
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLPFCQKQNPTFYRQIVTNLLRWSDSYDTPSRDYLEVAQYLSSLGFVNLREYYFIICAN CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEECC DEDEFDFHVINPFCNNRLEIVSDYDEDYDNPIMCDLCERDILPDTYKKQRYFSLEVKVNH CCCCCEEEEECHHHCCCEEEEECCCCCCCCCEEHHHHHCCCCCCCHHCCEEEEEEEEECH LKVIEWFEKQLASLKITCNKVATGVYYVIVDTSLISLIIPECCPDNSYSAVDKLKTTPTA HHHHHHHHHHHHHEEEEEEHHCCCEEEEEEHHHHHHHHHHCCCCCCCCHHHHHHCCCCEE LITFNKESLKPPLNLHIVPIADLICEDQSLNEVLHQTVEKGVPELLPNVSFQAFNCYSYI EEEECHHHCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCEEEEEEEEEC PLQQTKSTPAEKTFQLHIKGNDICVNGIGVIETQSKSGRIFFIFLDQFFHDFKSGISPEQ CCHHCCCCCCCCEEEEEEECCEEEEECEEEEEECCCCCCEEEEEHHHHHHHHHCCCCHHH YKTLNVGEIANRLENIHDVEQQIRKPINRMQKTIAEKLAITLGLNVKKDDIIQTLPWSGI EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCC GTKEYGYRLNPFTIVLKK CCCCCCEEECCEEEEEEC >Mature Secondary Structure MDLPFCQKQNPTFYRQIVTNLLRWSDSYDTPSRDYLEVAQYLSSLGFVNLREYYFIICAN CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEECC DEDEFDFHVINPFCNNRLEIVSDYDEDYDNPIMCDLCERDILPDTYKKQRYFSLEVKVNH CCCCCEEEEECHHHCCCEEEEECCCCCCCCCEEHHHHHCCCCCCCHHCCEEEEEEEEECH LKVIEWFEKQLASLKITCNKVATGVYYVIVDTSLISLIIPECCPDNSYSAVDKLKTTPTA HHHHHHHHHHHHHEEEEEEHHCCCEEEEEEHHHHHHHHHHCCCCCCCCHHHHHHCCCCEE LITFNKESLKPPLNLHIVPIADLICEDQSLNEVLHQTVEKGVPELLPNVSFQAFNCYSYI EEEECHHHCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCEEEEEEEEEC PLQQTKSTPAEKTFQLHIKGNDICVNGIGVIETQSKSGRIFFIFLDQFFHDFKSGISPEQ CCHHCCCCCCCCEEEEEEECCEEEEECEEEEEECCCCCCEEEEEHHHHHHHHHCCCCHHH YKTLNVGEIANRLENIHDVEQQIRKPINRMQKTIAEKLAITLGLNVKKDDIIQTLPWSGI EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCC GTKEYGYRLNPFTIVLKK CCCCCCEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA