Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190571624
Identifier: 190571624
GI number: 190571624
Start: 1319609
End: 1320847
Strand: Reverse
Name: 190571624
Synonym: WPa_1248
Alternate gene names: NA
Gene position: 1320847-1319609 (Counterclockwise)
Preceding gene: 190571625
Following gene: 190571618
Centisome position: 89.1
GC content: 39.47
Gene sequence:
>1239_bases ATGAGTCAGAAAGTAGTAAACAGAACTACCGGTTTGGTAGATTATAAAGAATTAGAAACAAATATCCTGTCGTCTATACG AGAAGGAAGACCGTTGACAGGAAGAGATGGAGCATTAACACCGTTTATAAAAAAGTTGCTGGAGGTAAGCCTGGAAGGTG AAATAGAAAACCACTTGTCGGCCGAAAGCGAAGAGAATAATCGAAGAAATGGGAGGAATGCAAAGACTTTACGTACAAGC GCAGGGTCATTTGAGCTTTTGACGCCAAGAGATAGGGAAGGAAGTTTCGAACCACAAATAGTCAAAAAAAGGCAAACAAA CTTACATCCAGAGCTTGAAACGAAGATTTTGAGCACATTTGCCAGTGGTATGGGCTATAGAGATATAGTGTCACATGTTG AGGAAATTTATGATCACAAAATATCGGCGGCAGAGATATCAAGTATTACTGACAAATTGCTACCAGTAATCAACGAATGG CGTAGTCGCCCGCTGCAGTCTGTATATCCGATAGTTTTCATGGATGGCATGTTTTTTAAAGTCAAAGAGGACGGGCATTG CGTAAGTAAATGCATGTATAACATATTAGGCATAGATCAAAATGGCAAAAAAGAAGTATTAGGTTTTTATTTGGCTGAAA GTGAAGGAGCTAACTTCTGGTTGGGAGTGCTAAATGACCTCAAAGAAAGAGGAGTAGAAGATATCCTTATTGCCTGCGTT GATGGGCTGAAAAGCTTTCCTGCAGCTATAAACAGTGTCTTTCCTAATGCGGAAGTGCAGATGTGTATAGTGCATCAGAT ACGCAACTCACTGAAGTATGTGGCCAGTAAAGATGCGAAGAGTTTTTTGAGCGATTTAAAGAAGGTATATCAAGCTTCAA GCAAGGAAATTGCCGAGAATTATCTGTTGGAATTGGATGAAAAATGGGGCACAAAGTACCCTATGGTTATAAAATCTTGG CAGAATAATTGGGAAAACTTGTCTGGTTATTTTAAGTATTCTGGTCCAGTTAGGAGGATAATCTACACCACCAATCCCAT AGAGGGGCTACATAGGCAAATTAGGAAATTCACTAAGACCAAAGGCTCATTTACCAGCATAAATGCCTTGTATAAGCAGG TATATTGTGCTATAAAGAAGGTAGAGGAAAAGTCGACGATGCCTGTACATGATTGGGCATTAACTATCTCTCAACTTGAT GTTTTCTTTCCTGGCAGATTGAAAATTGAGTTGAACTAA
Upstream 100 bases:
>100_bases TATTTTTAACCTAGTATCCAGAATAAAAGGGAGTGTTAAATAAACTGTGTCAAACCGAAAAAAAAGTAATAAATTGATAT AAAAAAATGGAGGTTTGACA
Downstream 100 bases:
>100_bases AAATGCGGTTTGACACAGTTTATTTAACACTCCCGAATAAAAAAATATCAAAGTCATCATATTATATCACGAACCTTTTC CAAGACTTTTTTTATATTTT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MSQKVVNRTTGLVDYKELETNILSSIREGRPLTGRDGALTPFIKKLLEVSLEGEIENHLSAESEENNRRNGRNAKTLRTS AGSFELLTPRDREGSFEPQIVKKRQTNLHPELETKILSTFASGMGYRDIVSHVEEIYDHKISAAEISSITDKLLPVINEW RSRPLQSVYPIVFMDGMFFKVKEDGHCVSKCMYNILGIDQNGKKEVLGFYLAESEGANFWLGVLNDLKERGVEDILIACV DGLKSFPAAINSVFPNAEVQMCIVHQIRNSLKYVASKDAKSFLSDLKKVYQASSKEIAENYLLELDEKWGTKYPMVIKSW QNNWENLSGYFKYSGPVRRIIYTTNPIEGLHRQIRKFTKTKGSFTSINALYKQVYCAIKKVEEKSTMPVHDWALTISQLD VFFPGRLKIELN
Sequences:
>Translated_412_residues MSQKVVNRTTGLVDYKELETNILSSIREGRPLTGRDGALTPFIKKLLEVSLEGEIENHLSAESEENNRRNGRNAKTLRTS AGSFELLTPRDREGSFEPQIVKKRQTNLHPELETKILSTFASGMGYRDIVSHVEEIYDHKISAAEISSITDKLLPVINEW RSRPLQSVYPIVFMDGMFFKVKEDGHCVSKCMYNILGIDQNGKKEVLGFYLAESEGANFWLGVLNDLKERGVEDILIACV DGLKSFPAAINSVFPNAEVQMCIVHQIRNSLKYVASKDAKSFLSDLKKVYQASSKEIAENYLLELDEKWGTKYPMVIKSW QNNWENLSGYFKYSGPVRRIIYTTNPIEGLHRQIRKFTKTKGSFTSINALYKQVYCAIKKVEEKSTMPVHDWALTISQLD VFFPGRLKIELN >Mature_411_residues SQKVVNRTTGLVDYKELETNILSSIREGRPLTGRDGALTPFIKKLLEVSLEGEIENHLSAESEENNRRNGRNAKTLRTSA GSFELLTPRDREGSFEPQIVKKRQTNLHPELETKILSTFASGMGYRDIVSHVEEIYDHKISAAEISSITDKLLPVINEWR SRPLQSVYPIVFMDGMFFKVKEDGHCVSKCMYNILGIDQNGKKEVLGFYLAESEGANFWLGVLNDLKERGVEDILIACVD GLKSFPAAINSVFPNAEVQMCIVHQIRNSLKYVASKDAKSFLSDLKKVYQASSKEIAENYLLELDEKWGTKYPMVIKSWQ NNWENLSGYFKYSGPVRRIIYTTNPIEGLHRQIRKFTKTKGSFTSINALYKQVYCAIKKVEEKSTMPVHDWALTISQLDV FFPGRLKIELN
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 46923; Mature: 46792
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKVVNRTTGLVDYKELETNILSSIREGRPLTGRDGALTPFIKKLLEVSLEGEIENHLS CCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHC AESEENNRRNGRNAKTLRTSAGSFELLTPRDREGSFEPQIVKKRQTNLHPELETKILSTF CCCCCCCCCCCCCCHHEECCCCCEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH ASGMGYRDIVSHVEEIYDHKISAAEISSITDKLLPVINEWRSRPLQSVYPIVFMDGMFFK HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEECCEEEE VKEDGHCVSKCMYNILGIDQNGKKEVLGFYLAESEGANFWLGVLNDLKERGVEDILIACV ECCCCHHHHHHHHHHHCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHH DGLKSFPAAINSVFPNAEVQMCIVHQIRNSLKYVASKDAKSFLSDLKKVYQASSKEIAEN HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLELDEKWGTKYPMVIKSWQNNWENLSGYFKYSGPVRRIIYTTNPIEGLHRQIRKFTKT HHHHHHHHHCCCCCHHHHHHHCCHHCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHC KGSFTSINALYKQVYCAIKKVEEKSTMPVHDWALTISQLDVFFPGRLKIELN CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCEEEEEEC >Mature Secondary Structure SQKVVNRTTGLVDYKELETNILSSIREGRPLTGRDGALTPFIKKLLEVSLEGEIENHLS CCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHC AESEENNRRNGRNAKTLRTSAGSFELLTPRDREGSFEPQIVKKRQTNLHPELETKILSTF CCCCCCCCCCCCCCHHEECCCCCEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH ASGMGYRDIVSHVEEIYDHKISAAEISSITDKLLPVINEWRSRPLQSVYPIVFMDGMFFK HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEECCEEEE VKEDGHCVSKCMYNILGIDQNGKKEVLGFYLAESEGANFWLGVLNDLKERGVEDILIACV ECCCCHHHHHHHHHHHCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHH DGLKSFPAAINSVFPNAEVQMCIVHQIRNSLKYVASKDAKSFLSDLKKVYQASSKEIAEN HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLELDEKWGTKYPMVIKSWQNNWENLSGYFKYSGPVRRIIYTTNPIEGLHRQIRKFTKT HHHHHHHHHCCCCCHHHHHHHCCHHCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHC KGSFTSINALYKQVYCAIKKVEEKSTMPVHDWALTISQLDVFFPGRLKIELN CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]