The gene/protein map for NC_010981 is currently unavailable.
Definition Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome.
Accession NC_010981
Length 1,482,455

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The map label for this gene is ybbO [C]

Identifier: 190571542

GI number: 190571542

Start: 1249763

End: 1250479

Strand: Reverse

Name: ybbO [C]

Synonym: WPa_1162

Alternate gene names: 190571542

Gene position: 1250479-1249763 (Counterclockwise)

Preceding gene: 190571577

Following gene: 190571541

Centisome position: 84.35

GC content: 33.33

Gene sequence:

>717_bases
ATGGATAGAAAAACTTGTCTCATTACAGGAGCATCATCTGGCATTGGAGAAAGTCTAGCACGGTTGCTCATTAAAGATCG
ATGGTTTGTGGTTGGCATTGCAAGGCGCACTGAAAAACTGGAAAAATTAAAAGAAGAATTAGGTAGTAATTTTTTACCTA
TAACATGTGATGTAAGCAAAAGTGAAAATATTAAAAACTCGTCTGATTTTTTAAAAAAGCAAAATATTATACCAAATCTC
TTTTTTCTTAATGCAGGATGTGGCGAAATAGAAGATAAGTTTCATACCAACATTCATAGAAAAACATTTGAAACCAATTA
TTTTGGCGTTATCAACTGGATTGAAGAATGGATTCATCATAATTCCTTGGCAACTTTTGCGGTTATATCTTCTCTTGTTG
CTATGCATGCAACACCACATGCTTCTGCATACTGTGCCAGCAAAGCAGCACTAAAAAGTTGTTTTCAATCACTAAAAATC
CAATATTCTAACAGTAGCACAAAGTTTATCACCATAATGCCAGGGCCAGTAAAAACAGATATGTTTAAGTCTAATAAACC
ACTTCCCTTCATATGGGAGCCAGAAAAAGCTGCAGCATATATTTTAAAAAGTATATTTAAAGGAAAGAAAGTTATAGCGT
TTCCAATTTTCTGGCGGTTATTTTTTCATATTTTACAAATTCTTCCCACTAAAATGACTGCAAGAATCTTACGATAA

Upstream 100 bases:

>100_bases
GTAGCTTTCTTTTTTTATTATTTAGGAAAATTATAGCAAACTTAACTTGTGTGAATAGGCAATAGTCATTACATTCATAC
TTCATGTTATATAAATTCAC

Downstream 100 bases:

>100_bases
TCACCAAATCTATCATCTTGTAAAGCTAAAGCTCTTCAAAACTCAATCGCAAGCTTCTCCACACAAAAACATCTTGACTA
TCGCATGTTTCATATTATAT

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MDRKTCLITGASSGIGESLARLLIKDRWFVVGIARRTEKLEKLKEELGSNFLPITCDVSKSENIKNSSDFLKKQNIIPNL
FFLNAGCGEIEDKFHTNIHRKTFETNYFGVINWIEEWIHHNSLATFAVISSLVAMHATPHASAYCASKAALKSCFQSLKI
QYSNSSTKFITIMPGPVKTDMFKSNKPLPFIWEPEKAAAYILKSIFKGKKVIAFPIFWRLFFHILQILPTKMTARILR

Sequences:

>Translated_238_residues
MDRKTCLITGASSGIGESLARLLIKDRWFVVGIARRTEKLEKLKEELGSNFLPITCDVSKSENIKNSSDFLKKQNIIPNL
FFLNAGCGEIEDKFHTNIHRKTFETNYFGVINWIEEWIHHNSLATFAVISSLVAMHATPHASAYCASKAALKSCFQSLKI
QYSNSSTKFITIMPGPVKTDMFKSNKPLPFIWEPEKAAAYILKSIFKGKKVIAFPIFWRLFFHILQILPTKMTARILR
>Mature_238_residues
MDRKTCLITGASSGIGESLARLLIKDRWFVVGIARRTEKLEKLKEELGSNFLPITCDVSKSENIKNSSDFLKKQNIIPNL
FFLNAGCGEIEDKFHTNIHRKTFETNYFGVINWIEEWIHHNSLATFAVISSLVAMHATPHASAYCASKAALKSCFQSLKI
QYSNSSTKFITIMPGPVKTDMFKSNKPLPFIWEPEKAAAYILKSIFKGKKVIAFPIFWRLFFHILQILPTKMTARILR

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Escherichia coli, GI1786701, Length=262, Percent_Identity=24.4274809160305, Blast_Score=68, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6322067, Length=196, Percent_Identity=29.5918367346939, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6323882, Length=194, Percent_Identity=29.8969072164948, Blast_Score=69, Evalue=9e-13,
Organism=Drosophila melanogaster, GI281364494, Length=201, Percent_Identity=30.3482587064677, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24663911, Length=195, Percent_Identity=28.2051282051282, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21358495, Length=253, Percent_Identity=24.5059288537549, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27092; Mature: 27092

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRKTCLITGASSGIGESLARLLIKDRWFVVGIARRTEKLEKLKEELGSNFLPITCDVSK
CCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCC
SENIKNSSDFLKKQNIIPNLFFLNAGCGEIEDKFHTNIHRKTFETNYFGVINWIEEWIHH
CCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
NSLATFAVISSLVAMHATPHASAYCASKAALKSCFQSLKIQYSNSSTKFITIMPGPVKTD
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCHH
MFKSNKPLPFIWEPEKAAAYILKSIFKGKKVIAFPIFWRLFFHILQILPTKMTARILR
HHCCCCCCCEEECCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDRKTCLITGASSGIGESLARLLIKDRWFVVGIARRTEKLEKLKEELGSNFLPITCDVSK
CCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCC
SENIKNSSDFLKKQNIIPNLFFLNAGCGEIEDKFHTNIHRKTFETNYFGVINWIEEWIHH
CCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
NSLATFAVISSLVAMHATPHASAYCASKAALKSCFQSLKIQYSNSSTKFITIMPGPVKTD
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCHH
MFKSNKPLPFIWEPEKAAAYILKSIFKGKKVIAFPIFWRLFFHILQILPTKMTARILR
HHCCCCCCCEEECCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]