| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is 190571395
Identifier: 190571395
GI number: 190571395
Start: 1068871
End: 1070316
Strand: Reverse
Name: 190571395
Synonym: WPa_1003
Alternate gene names: NA
Gene position: 1070316-1068871 (Counterclockwise)
Preceding gene: 190571397
Following gene: 190571394
Centisome position: 72.2
GC content: 33.47
Gene sequence:
>1446_bases ATGAGTAGCAAGAAACGCGTTTTTAAGATGGTACCCGGAGAGGAATTATCAAAAGGATTTGGTAACAACGTCTATTGGCC TGAATTTTCTCTTTTTCAATCGGTTAAAAAAGTTAAGCTTGTGCAACTGGGAAAAGAAGATGAAACGATAGAATTACCAA TAAGATTATGCGGCAATAACATCCTTGGAGATACCTTTTATTGCATAAGGAACGAAGAGGGAAATACTTTGAAAGGTAGT TTTTCTAGAGATAAACCATGTTATACAAAAAACAGTTGTGCATTTGTATATTATAATGATATGTTAGTCAAGCTATCAAT GAAATCGTACTTTGTAGACTGCGAAGAAGGTTGTTCTGGTACTTTGCGTAATGATATTAAATCTGAGAGATCTAAGTACA TTTATGTAACACAGGAAGAATTGTCTGATACTTATAAATATTATTTCTCAGATTATCAAGGAAATATTGTTAATTCACCT GACAATCAGGCATTACAATATATTGGGCTGGACGTCAGTGAAGAAACAGTAAAAAATATATTATCTAAAATACCAGAGAA TATAATACTATCAAAGGTGTTTGCTAAAATTTTTGTTGGGGGACTAACAGAAGATCAGTTAGAAACTCTTACCCATACTC TTAGTGAAGTCCAAATAGAGAACTTAGTAAAGCACTTAACAGATAATCAATGGAAAACTTTGGTGAGTCATTTAACCAAT CACCAATTACATATTCTTGCTTATGAACTAAATCCAGAAAAATTACAAATAATTATTCCTATTTTAAATGATGATCAGCT TGGAGCCCTAGTGAGAGAATTAAATCCAGAGCAAGTAAGAGAAATTTTACCTCATTTAAAAGTCGATCAGTTCAAGGCAC TTATCAATAATATAGACGATTATCAGCTTGTAGAATTAGCAAAAGATTTAGATGAGCACCATTTGACCATTCTTTCCAAG GAATTGTGGTCTGAGCAACTTCCAGCCCTAGTACACACTTTAGAAGGAGATAGGTTACATAATTTAATTAATAAACTAGA CCACGATAAACTTGCAATAGTAGCTCGAGATTTAACTGATTCTAATAAGATTCAGATTATCATTAAGTCTTTAGCTGACA ACCCAGACAAACTTCAAGCTTTTGCTCGCAATATGTCTAATGAGCAGTTTAAAGAACTTTTGGATAATTTAGGTGCAGGA GAGCTGAAAGATATTATTCACAAATTGCCTCACGAGAAAGTCATGTCTGTGATTGGTGATCTTAGCAGTAAAGATCAGTC CAATGCTATTATTGATGCATTGAAAGAGAAACTTGAAGAACAGAATAAACATAACGAGGAAATCAAGGAGATGCTCAAGC AAATCAAGGATGATATGCCAGAAATTGGACAGGCCCCAGACTTCACAATAGTAGACATTAATAATGACTCACTGTTATTT GTATAG
Upstream 100 bases:
>100_bases AAGTAATGTGTGTTATTATAATTCTGATATATACTAACTTAACAATAAATTAATCAATAAATGTTAGAATAGCTATAATT AAGTTGATTAGGAAATACTT
Downstream 100 bases:
>100_bases TAGTGATTTATAAAGATAAGTAGTTTTTTTATAGGAGGTAACTATTATGAGTAAAAGTACAAAATTATATTCTAGTGAAG GAGTTGAATTAAATAGTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MSSKKRVFKMVPGEELSKGFGNNVYWPEFSLFQSVKKVKLVQLGKEDETIELPIRLCGNNILGDTFYCIRNEEGNTLKGS FSRDKPCYTKNSCAFVYYNDMLVKLSMKSYFVDCEEGCSGTLRNDIKSERSKYIYVTQEELSDTYKYYFSDYQGNIVNSP DNQALQYIGLDVSEETVKNILSKIPENIILSKVFAKIFVGGLTEDQLETLTHTLSEVQIENLVKHLTDNQWKTLVSHLTN HQLHILAYELNPEKLQIIIPILNDDQLGALVRELNPEQVREILPHLKVDQFKALINNIDDYQLVELAKDLDEHHLTILSK ELWSEQLPALVHTLEGDRLHNLINKLDHDKLAIVARDLTDSNKIQIIIKSLADNPDKLQAFARNMSNEQFKELLDNLGAG ELKDIIHKLPHEKVMSVIGDLSSKDQSNAIIDALKEKLEEQNKHNEEIKEMLKQIKDDMPEIGQAPDFTIVDINNDSLLF V
Sequences:
>Translated_481_residues MSSKKRVFKMVPGEELSKGFGNNVYWPEFSLFQSVKKVKLVQLGKEDETIELPIRLCGNNILGDTFYCIRNEEGNTLKGS FSRDKPCYTKNSCAFVYYNDMLVKLSMKSYFVDCEEGCSGTLRNDIKSERSKYIYVTQEELSDTYKYYFSDYQGNIVNSP DNQALQYIGLDVSEETVKNILSKIPENIILSKVFAKIFVGGLTEDQLETLTHTLSEVQIENLVKHLTDNQWKTLVSHLTN HQLHILAYELNPEKLQIIIPILNDDQLGALVRELNPEQVREILPHLKVDQFKALINNIDDYQLVELAKDLDEHHLTILSK ELWSEQLPALVHTLEGDRLHNLINKLDHDKLAIVARDLTDSNKIQIIIKSLADNPDKLQAFARNMSNEQFKELLDNLGAG ELKDIIHKLPHEKVMSVIGDLSSKDQSNAIIDALKEKLEEQNKHNEEIKEMLKQIKDDMPEIGQAPDFTIVDINNDSLLF V >Mature_480_residues SSKKRVFKMVPGEELSKGFGNNVYWPEFSLFQSVKKVKLVQLGKEDETIELPIRLCGNNILGDTFYCIRNEEGNTLKGSF SRDKPCYTKNSCAFVYYNDMLVKLSMKSYFVDCEEGCSGTLRNDIKSERSKYIYVTQEELSDTYKYYFSDYQGNIVNSPD NQALQYIGLDVSEETVKNILSKIPENIILSKVFAKIFVGGLTEDQLETLTHTLSEVQIENLVKHLTDNQWKTLVSHLTNH QLHILAYELNPEKLQIIIPILNDDQLGALVRELNPEQVREILPHLKVDQFKALINNIDDYQLVELAKDLDEHHLTILSKE LWSEQLPALVHTLEGDRLHNLINKLDHDKLAIVARDLTDSNKIQIIIKSLADNPDKLQAFARNMSNEQFKELLDNLGAGE LKDIIHKLPHEKVMSVIGDLSSKDQSNAIIDALKEKLEEQNKHNEEIKEMLKQIKDDMPEIGQAPDFTIVDINNDSLLFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55093; Mature: 54961
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKKRVFKMVPGEELSKGFGNNVYWPEFSLFQSVKKVKLVQLGKEDETIELPIRLCGNN CCCHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCC ILGDTFYCIRNEEGNTLKGSFSRDKPCYTKNSCAFVYYNDMLVKLSMKSYFVDCEEGCSG CCCCCEEEEECCCCCEECCCCCCCCCCCCCCCEEEEEECCEEEEEEHHHHHEEHHHCCCC TLRNDIKSERSKYIYVTQEELSDTYKYYFSDYQGNIVNSPDNQALQYIGLDVSEETVKNI HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHH LSKIPENIILSKVFAKIFVGGLTEDQLETLTHTLSEVQIENLVKHLTDNQWKTLVSHLTN HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC HQLHILAYELNPEKLQIIIPILNDDQLGALVRELNPEQVREILPHLKVDQFKALINNIDD CCEEEEEEEECCCEEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCC YQLVELAKDLDEHHLTILSKELWSEQLPALVHTLEGDRLHNLINKLDHDKLAIVARDLTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCC SNKIQIIIKSLADNPDKLQAFARNMSNEQFKELLDNLGAGELKDIIHKLPHEKVMSVIGD CCHHEEHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHC LSSKDQSNAIIDALKEKLEEQNKHNEEIKEMLKQIKDDMPEIGQAPDFTIVDINNDSLLF CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCEEEEEECCCCEEE V C >Mature Secondary Structure SSKKRVFKMVPGEELSKGFGNNVYWPEFSLFQSVKKVKLVQLGKEDETIELPIRLCGNN CCHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCC ILGDTFYCIRNEEGNTLKGSFSRDKPCYTKNSCAFVYYNDMLVKLSMKSYFVDCEEGCSG CCCCCEEEEECCCCCEECCCCCCCCCCCCCCCEEEEEECCEEEEEEHHHHHEEHHHCCCC TLRNDIKSERSKYIYVTQEELSDTYKYYFSDYQGNIVNSPDNQALQYIGLDVSEETVKNI HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHH LSKIPENIILSKVFAKIFVGGLTEDQLETLTHTLSEVQIENLVKHLTDNQWKTLVSHLTN HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC HQLHILAYELNPEKLQIIIPILNDDQLGALVRELNPEQVREILPHLKVDQFKALINNIDD CCEEEEEEEECCCEEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCC YQLVELAKDLDEHHLTILSKELWSEQLPALVHTLEGDRLHNLINKLDHDKLAIVARDLTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCC SNKIQIIIKSLADNPDKLQAFARNMSNEQFKELLDNLGAGELKDIIHKLPHEKVMSVIGD CCHHEEHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHC LSSKDQSNAIIDALKEKLEEQNKHNEEIKEMLKQIKDDMPEIGQAPDFTIVDINNDSLLF CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCEEEEEECCCCEEE V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA