| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is 190571376
Identifier: 190571376
GI number: 190571376
Start: 1051705
End: 1053114
Strand: Reverse
Name: 190571376
Synonym: WPa_0984
Alternate gene names: NA
Gene position: 1053114-1051705 (Counterclockwise)
Preceding gene: 190571377
Following gene: 190571363
Centisome position: 71.04
GC content: 34.04
Gene sequence:
>1410_bases ATGCCTAATAAAAGTAAAATAAATCGAGAATTAGTAAAAGCGTTTAATAGTGTTCTTCTTTCTGATAATACTGCTATTAC TAATCTCACTATAGAAAAAGATCATGTTGTTCTCTCATTTGATAAAAATATGAATATTGATCAGCGTAGAGAGTACTTGA AAAATATGAGAGAGAGTATAGTAGAAAAGTTTTGTGGAAATGAAAGGGCTGCCAATGATCTTTTTTATACAGACTCTTTT CCTTTTAACTTTAATCAAGGAAAATGGACTACAGATAGTAGCAGACATAGGTTTTCAGTGCCAATTGAAAAAGAGGTAGT TTGTAATCTAAAATATTTGCTAGCTAATGAACTTATAAGATTCACAATAGAGAGTATTATAGACGATCATCCTAAAGGTC CAGATTATGTGGAAAACAATTTATACGATGTGGGTTTTGAAAGAAAATATTATTTATACTGTAAGGGCTTTGATGATCGA GAATTAAAAGACTCTTTTGTAAAATCATTCTCATCGAGAATGGAAAGTTATGAAAATAGTCCTAAAAGATTTAAGGGTTT TTTAGAAGAGAAGGGGAATGATGTATATTTAAAGAAAGGCGTTTTTGATGATCTTAAGTTCGTCAAAGACATAGTAAGGC ATGAAATATACTTGACATGTCGTTGTTTTGATACTCCAAAAGGCGAGATTGGAGTTAGTGACATGCTGAAATTTGCAGTG GTTGATTTGCTTCGTAAAGCAAACATACCAGTTGATCGTATATTGCGTGACTCTTACTTGAACAGTGACGAAGATTCAAT TTTAATTCCTATTGTAAGTTATAATAATAATGAGGAGGGATATTTAACAAGAGAAGAAGTGAATCACGTTAATAATATGT TTGGTATGGATATATTAAATAGCTTTGAAGGTCGGACTTCACAGAAATCGCTATTGGGCAGTAAAGGAGTGTATGGAATA GATTTTGCTAACCCAGACATTGCTTACTGTGTGATGGATAAGATCATAGAGAGCTCTGTAATCAATAAGGATTATAAACT GTCCATTGATCCTGCACGTGTGCCAGCTATGAAACCACAAATTCTTGTCCCTCCTGAAAAAGTAGGGACGGATGGACCAA GTGCAGATACAAGTGCAGATAGTGGTTTTGGTGATTCACCTAAGAATTCAGTTATAGGTAAATCACATAATGGAAACACA AGCAAATTCCTTAGGCCCGACTACTATGGTGAAGGTAAAGGTGGGGATGATGCTTCGGCTAAAGATAGTGGCTTTGGCCC TTCTTCAGCACGATCTTCTTTTAATAAGCCCGAAATAACATTTAACCAACCTTCTATATCACAGCCTGACCAATGTTCTG CAAAAAAGCAGACATCAACTAATAAAAAATCAATTTGTTGTATTTTATAG
Upstream 100 bases:
>100_bases ACTTTAGAGACATGATTAGACGTGAAGAGGAAAGAAAGAAAAATCAATCTAGTGGTCAGGGCAGCAGTAAATAATTATAT TAGTTTAGGGGGGTGGCGTT
Downstream 100 bases:
>100_bases CTAAAGGAAATTAGGCTATTCAAAGATGAATTGTGAATGAAAGTTTATTTGCCAAGGTAGAGCTGCCTTGGCCTACAAAT CTTGGTTTCTTTATCGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MPNKSKINRELVKAFNSVLLSDNTAITNLTIEKDHVVLSFDKNMNIDQRREYLKNMRESIVEKFCGNERAANDLFYTDSF PFNFNQGKWTTDSSRHRFSVPIEKEVVCNLKYLLANELIRFTIESIIDDHPKGPDYVENNLYDVGFERKYYLYCKGFDDR ELKDSFVKSFSSRMESYENSPKRFKGFLEEKGNDVYLKKGVFDDLKFVKDIVRHEIYLTCRCFDTPKGEIGVSDMLKFAV VDLLRKANIPVDRILRDSYLNSDEDSILIPIVSYNNNEEGYLTREEVNHVNNMFGMDILNSFEGRTSQKSLLGSKGVYGI DFANPDIAYCVMDKIIESSVINKDYKLSIDPARVPAMKPQILVPPEKVGTDGPSADTSADSGFGDSPKNSVIGKSHNGNT SKFLRPDYYGEGKGGDDASAKDSGFGPSSARSSFNKPEITFNQPSISQPDQCSAKKQTSTNKKSICCIL
Sequences:
>Translated_469_residues MPNKSKINRELVKAFNSVLLSDNTAITNLTIEKDHVVLSFDKNMNIDQRREYLKNMRESIVEKFCGNERAANDLFYTDSF PFNFNQGKWTTDSSRHRFSVPIEKEVVCNLKYLLANELIRFTIESIIDDHPKGPDYVENNLYDVGFERKYYLYCKGFDDR ELKDSFVKSFSSRMESYENSPKRFKGFLEEKGNDVYLKKGVFDDLKFVKDIVRHEIYLTCRCFDTPKGEIGVSDMLKFAV VDLLRKANIPVDRILRDSYLNSDEDSILIPIVSYNNNEEGYLTREEVNHVNNMFGMDILNSFEGRTSQKSLLGSKGVYGI DFANPDIAYCVMDKIIESSVINKDYKLSIDPARVPAMKPQILVPPEKVGTDGPSADTSADSGFGDSPKNSVIGKSHNGNT SKFLRPDYYGEGKGGDDASAKDSGFGPSSARSSFNKPEITFNQPSISQPDQCSAKKQTSTNKKSICCIL >Mature_468_residues PNKSKINRELVKAFNSVLLSDNTAITNLTIEKDHVVLSFDKNMNIDQRREYLKNMRESIVEKFCGNERAANDLFYTDSFP FNFNQGKWTTDSSRHRFSVPIEKEVVCNLKYLLANELIRFTIESIIDDHPKGPDYVENNLYDVGFERKYYLYCKGFDDRE LKDSFVKSFSSRMESYENSPKRFKGFLEEKGNDVYLKKGVFDDLKFVKDIVRHEIYLTCRCFDTPKGEIGVSDMLKFAVV DLLRKANIPVDRILRDSYLNSDEDSILIPIVSYNNNEEGYLTREEVNHVNNMFGMDILNSFEGRTSQKSLLGSKGVYGID FANPDIAYCVMDKIIESSVINKDYKLSIDPARVPAMKPQILVPPEKVGTDGPSADTSADSGFGDSPKNSVIGKSHNGNTS KFLRPDYYGEGKGGDDASAKDSGFGPSSARSSFNKPEITFNQPSISQPDQCSAKKQTSTNKKSICCIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53067; Mature: 52936
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNKSKINRELVKAFNSVLLSDNTAITNLTIEKDHVVLSFDKNMNIDQRREYLKNMRESI CCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHH VEKFCGNERAANDLFYTDSFPFNFNQGKWTTDSSRHRFSVPIEKEVVCNLKYLLANELIR HHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHH FTIESIIDDHPKGPDYVENNLYDVGFERKYYLYCKGFDDRELKDSFVKSFSSRMESYENS HHHHHHHCCCCCCCCHHHCCCEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC PKRFKGFLEEKGNDVYLKKGVFDDLKFVKDIVRHEIYLTCRCFDTPKGEIGVSDMLKFAV HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCEEEEEEEEECCCCCCCCHHHHHHHHH VDLLRKANIPVDRILRDSYLNSDEDSILIPIVSYNNNEEGYLTREEVNHVNNMFGMDILN HHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHH SFEGRTSQKSLLGSKGVYGIDFANPDIAYCVMDKIIESSVINKDYKLSIDPARVPAMKPQ HHCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCCC ILVPPEKVGTDGPSADTSADSGFGDSPKNSVIGKSHNGNTSKFLRPDYYGEGKGGDDASA EECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KDSGFGPSSARSSFNKPEITFNQPSISQPDQCSAKKQTSTNKKSICCIL CCCCCCCCHHHHCCCCCCEEECCCCCCCCHHCCCHHHCCCCCCCEEEEC >Mature Secondary Structure PNKSKINRELVKAFNSVLLSDNTAITNLTIEKDHVVLSFDKNMNIDQRREYLKNMRESI CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHH VEKFCGNERAANDLFYTDSFPFNFNQGKWTTDSSRHRFSVPIEKEVVCNLKYLLANELIR HHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHH FTIESIIDDHPKGPDYVENNLYDVGFERKYYLYCKGFDDRELKDSFVKSFSSRMESYENS HHHHHHHCCCCCCCCHHHCCCEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC PKRFKGFLEEKGNDVYLKKGVFDDLKFVKDIVRHEIYLTCRCFDTPKGEIGVSDMLKFAV HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCEEEEEEEEECCCCCCCCHHHHHHHHH VDLLRKANIPVDRILRDSYLNSDEDSILIPIVSYNNNEEGYLTREEVNHVNNMFGMDILN HHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHH SFEGRTSQKSLLGSKGVYGIDFANPDIAYCVMDKIIESSVINKDYKLSIDPARVPAMKPQ HHCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCCC ILVPPEKVGTDGPSADTSADSGFGDSPKNSVIGKSHNGNTSKFLRPDYYGEGKGGDDASA EECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KDSGFGPSSARSSFNKPEITFNQPSISQPDQCSAKKQTSTNKKSICCIL CCCCCCCCHHHHCCCCCCEEECCCCCCCCHHCCCHHHCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA