| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is 190571353
Identifier: 190571353
GI number: 190571353
Start: 1025582
End: 1026694
Strand: Reverse
Name: 190571353
Synonym: WPa_0958
Alternate gene names: NA
Gene position: 1026694-1025582 (Counterclockwise)
Preceding gene: 190571355
Following gene: 190571351
Centisome position: 69.26
GC content: 34.14
Gene sequence:
>1113_bases ATGCTCTTTTGGCAAACTGGAGTTAGAAAGGGAGCAAATGTTTTCAATAGAAAAGTTGATAGTGACTTAATCAAAGCAGC AAAGGAATACAAAATTGGTTTTATTCGTCTTGCTCCTGACAAATTTGAAACTACGCAACGTGACTTCCTCTTAGGTAATG CAGACAGTTATCAGGGCCTAATTCCCAAAGACCTGAAAGTTCTGAAAGATGTTTTAGATGCTTTTCATCAACAAAAAATA CCAGTAGTGTTAACGATGCTTAGCTTACCTGGATCTAGATGGAAGCAAAATAATAACGATAAAGATGATTTACGTTTATG GTCAGATCAAGCTTTTCAAAAACAAGCAGCAAAATTTTGGCAAGATCTTGCGAAAGAGCTTAAAGATCATCCTGCTATTG TTGGATATAATATCTTAAATGAACCACATCCAGAAAGGCTTTATAATACTGCAGATTCGGCTATTTATAACGTAGAACAA AGCAAAGTTCAGAAGAATCTATTTGGCTTTTATAGCAGCGTGGTAAACAGTGTCCGCCAAGTTGACTCAGAGACCCCAAT AATACTTGATAGCAGCAGTTATGCTGACTCTAATACTTTTGATAAATTCAAACCAGTTGATGATTCTAATATTCTTTATT CTTTTCACATGTATGAGCCCTTTGCTTATACAAATTTAAAATTAAACCAGGATAACTTTGCCTACCCTGGACATGTTCAA TCTTTTGATGGAAAAAAAGTAGAGTATTGGAATAAAGATAAGTTAAAATTATATATAGAACCTGTAAAAATTTTCCAAGA GAAGTATAATATACAAGATTATCAGATCCTTGCTGGAGAGTTTGGCGTACATCGCTGTTCAAAAGGATTAGAGCACTATT TTCGAGATCTTACTTCTATTTTTAATGAATATAATTGGCACTTTGCTGTTTATGGCTTTCGAGAAGATATGTGGGATGGA ATGGATTATGAATTGGGAAGTAAAAAGCTTTCATGGAAAGATTGGCAAGCAATTGAAGAGGGTAGGATGAAAAAAAATTA TTTGCCAGATAATCCAATTTTTAAGATATTAAAAAAAGAATGGTCAAGTCAGCTCGCTGGCCATTCGTCATAA
Upstream 100 bases:
>100_bases CAAAATTATATAAGTGAAAATTTTTCTTCTAATTACAGCTGTTTTGTATTCTATAGTTTTCTGTAATGTGAGTGCTAAGT CAATACCGGAGAACAGCAAA
Downstream 100 bases:
>100_bases AAAAATATTTCTTCTATTGGCTTTCTGTTCTTTTCTTTAACTTCGGCACCTTCTTCCTCGTAACCAACCGCTATCACTGA CATTACATTAAAATCATCAG
Product: glycosyl hydrolase, family 5 protein
Products: NA
Alternate protein names: Cellulase-Like Protein; Glycosidase; Endoglucanase; Cellulase; Glycosyl Hydrolase Family 5 Protein; Glycosy Hydrolase Family Protein
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MLFWQTGVRKGANVFNRKVDSDLIKAAKEYKIGFIRLAPDKFETTQRDFLLGNADSYQGLIPKDLKVLKDVLDAFHQQKI PVVLTMLSLPGSRWKQNNNDKDDLRLWSDQAFQKQAAKFWQDLAKELKDHPAIVGYNILNEPHPERLYNTADSAIYNVEQ SKVQKNLFGFYSSVVNSVRQVDSETPIILDSSSYADSNTFDKFKPVDDSNILYSFHMYEPFAYTNLKLNQDNFAYPGHVQ SFDGKKVEYWNKDKLKLYIEPVKIFQEKYNIQDYQILAGEFGVHRCSKGLEHYFRDLTSIFNEYNWHFAVYGFREDMWDG MDYELGSKKLSWKDWQAIEEGRMKKNYLPDNPIFKILKKEWSSQLAGHSS
Sequences:
>Translated_370_residues MLFWQTGVRKGANVFNRKVDSDLIKAAKEYKIGFIRLAPDKFETTQRDFLLGNADSYQGLIPKDLKVLKDVLDAFHQQKI PVVLTMLSLPGSRWKQNNNDKDDLRLWSDQAFQKQAAKFWQDLAKELKDHPAIVGYNILNEPHPERLYNTADSAIYNVEQ SKVQKNLFGFYSSVVNSVRQVDSETPIILDSSSYADSNTFDKFKPVDDSNILYSFHMYEPFAYTNLKLNQDNFAYPGHVQ SFDGKKVEYWNKDKLKLYIEPVKIFQEKYNIQDYQILAGEFGVHRCSKGLEHYFRDLTSIFNEYNWHFAVYGFREDMWDG MDYELGSKKLSWKDWQAIEEGRMKKNYLPDNPIFKILKKEWSSQLAGHSS >Mature_370_residues MLFWQTGVRKGANVFNRKVDSDLIKAAKEYKIGFIRLAPDKFETTQRDFLLGNADSYQGLIPKDLKVLKDVLDAFHQQKI PVVLTMLSLPGSRWKQNNNDKDDLRLWSDQAFQKQAAKFWQDLAKELKDHPAIVGYNILNEPHPERLYNTADSAIYNVEQ SKVQKNLFGFYSSVVNSVRQVDSETPIILDSSSYADSNTFDKFKPVDDSNILYSFHMYEPFAYTNLKLNQDNFAYPGHVQ SFDGKKVEYWNKDKLKLYIEPVKIFQEKYNIQDYQILAGEFGVHRCSKGLEHYFRDLTSIFNEYNWHFAVYGFREDMWDG MDYELGSKKLSWKDWQAIEEGRMKKNYLPDNPIFKILKKEWSSQLAGHSS
Specific function: Unknown
COG id: COG2730
COG function: function code G; Endoglucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43327; Mature: 43327
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFWQTGVRKGANVFNRKVDSDLIKAAKEYKIGFIRLAPDKFETTQRDFLLGNADSYQGL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHCCCHHHEEECCCCCCCCC IPKDLKVLKDVLDAFHQQKIPVVLTMLSLPGSRWKQNNNDKDDLRLWSDQAFQKQAAKFW CHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QDLAKELKDHPAIVGYNILNEPHPERLYNTADSAIYNVEQSKVQKNLFGFYSSVVNSVRQ HHHHHHHHCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDSETPIILDSSSYADSNTFDKFKPVDDSNILYSFHMYEPFAYTNLKLNQDNFAYPGHVQ CCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEECCCCCCCCCCCC SFDGKKVEYWNKDKLKLYIEPVKIFQEKYNIQDYQILAGEFGVHRCSKGLEHYFRDLTSI CCCCCEEEECCCCCEEEEEHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH FNEYNWHFAVYGFREDMWDGMDYELGSKKLSWKDWQAIEEGRMKKNYLPDNPIFKILKKE HHCCCCEEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHCCCCCCCHHHHHHHHH WSSQLAGHSS HHHHHCCCCC >Mature Secondary Structure MLFWQTGVRKGANVFNRKVDSDLIKAAKEYKIGFIRLAPDKFETTQRDFLLGNADSYQGL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHCCCHHHEEECCCCCCCCC IPKDLKVLKDVLDAFHQQKIPVVLTMLSLPGSRWKQNNNDKDDLRLWSDQAFQKQAAKFW CHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QDLAKELKDHPAIVGYNILNEPHPERLYNTADSAIYNVEQSKVQKNLFGFYSSVVNSVRQ HHHHHHHHCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDSETPIILDSSSYADSNTFDKFKPVDDSNILYSFHMYEPFAYTNLKLNQDNFAYPGHVQ CCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEECCCCCCCCCCCC SFDGKKVEYWNKDKLKLYIEPVKIFQEKYNIQDYQILAGEFGVHRCSKGLEHYFRDLTSI CCCCCEEEECCCCCEEEEEHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH FNEYNWHFAVYGFREDMWDGMDYELGSKKLSWKDWQAIEEGRMKKNYLPDNPIFKILKKE HHCCCCEEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHCCCCCCCHHHHHHHHH WSSQLAGHSS HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA