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The map label for this gene is yciM [C]

Identifier: 190571349

GI number: 190571349

Start: 1023080

End: 1023946

Strand: Reverse

Name: yciM [C]

Synonym: WPa_0954

Alternate gene names: 190571349

Gene position: 1023946-1023080 (Counterclockwise)

Preceding gene: 190571350

Following gene: 190571348

Centisome position: 69.07

GC content: 31.72

Gene sequence:

>867_bases
GTGTTGCGTATAGTTCAAAGAAATAAGATTTACTGGTTACGCGCTGCAGCCAATGCCACAACACTAGGATCTATGTTTGT
CTGCATGTTAATTTGCGTTGTGATTTTATGGAGGTCTTCTGTTACTTATGCTAGTGAAAATTTGGAGATACAGAAGGTCT
TTGATAGTGTTGTCAAGCATATAAAAGCTGATAAAAAATATAAAGATCTTGATGTTATCGAGAGAAAAAGTGACAAATTT
AATATCAAAATTTCGCAGAATTCTGGCAAGAATTTTGACATATACTCTATTTTAAAAAAAGCAAAAGATTCCTTTGAGTT
AGGAGATAGTGAAACAGCTACTTCTCTCCTCAATCAGATTATCGCAAAATTTCCTTATCATGAAAGTGCTTTAATTGGAC
TAGGGAATATCTATTACGCTAACAAAGAATTTAAAAAAGCTGTAGAGATTTACACAAGACTGTTAAAAGAATATCCTAGC
AACCCTTATGTATTAAAGAATTTTCTGACGATAATTTCACAATATGATCCTAATTTAGCATTGAGTGAAATGTTGAAATT
GTATGATACACTCAGAAATAGCGCCCCTTTATCAGCAAATTTAGGTTTGATCTATATGAAAAAAGGGGATTACATAAAAG
CTAAAGAATATATGAAAGCAGCAATTTCTTTAGATCAAAACAATATTTTTTATACCTATAATTTAGCTGTTATTCTAGAT
AAGCTCTCAGATTTTAAAAATGCCACAGCATGTTATTCAAAGTTGTTGAACATGTCAAAAAATGCAAGTGAAAGAATACC
TTTATACAAGGTAGCAGCAAGGCTAAAATTTATACAACTCCATAGTGCGCACTCAGCGATTCCATAA

Upstream 100 bases:

>100_bases
GTAGAAGTGCTCTTTTAACTCATTCTAAATAGTATCTGCCAATTAATAATATCTTTATTATTATATTAGATAAGTAATTT
AGCATTTATGAATTTGTAAT

Downstream 100 bases:

>100_bases
GAGTTGCTTGTATCGCTATTTTTGTTTACAACAACAACATTGAACTATAGAATTATATCTAGAGGGGCAATTAGCTCAGC
TGGTAGAGCATCTCGTTTAC

Product: TPR domain protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MLRIVQRNKIYWLRAAANATTLGSMFVCMLICVVILWRSSVTYASENLEIQKVFDSVVKHIKADKKYKDLDVIERKSDKF
NIKISQNSGKNFDIYSILKKAKDSFELGDSETATSLLNQIIAKFPYHESALIGLGNIYYANKEFKKAVEIYTRLLKEYPS
NPYVLKNFLTIISQYDPNLALSEMLKLYDTLRNSAPLSANLGLIYMKKGDYIKAKEYMKAAISLDQNNIFYTYNLAVILD
KLSDFKNATACYSKLLNMSKNASERIPLYKVAARLKFIQLHSAHSAIP

Sequences:

>Translated_288_residues
MLRIVQRNKIYWLRAAANATTLGSMFVCMLICVVILWRSSVTYASENLEIQKVFDSVVKHIKADKKYKDLDVIERKSDKF
NIKISQNSGKNFDIYSILKKAKDSFELGDSETATSLLNQIIAKFPYHESALIGLGNIYYANKEFKKAVEIYTRLLKEYPS
NPYVLKNFLTIISQYDPNLALSEMLKLYDTLRNSAPLSANLGLIYMKKGDYIKAKEYMKAAISLDQNNIFYTYNLAVILD
KLSDFKNATACYSKLLNMSKNASERIPLYKVAARLKFIQLHSAHSAIP
>Mature_288_residues
MLRIVQRNKIYWLRAAANATTLGSMFVCMLICVVILWRSSVTYASENLEIQKVFDSVVKHIKADKKYKDLDVIERKSDKF
NIKISQNSGKNFDIYSILKKAKDSFELGDSETATSLLNQIIAKFPYHESALIGLGNIYYANKEFKKAVEIYTRLLKEYPS
NPYVLKNFLTIISQYDPNLALSEMLKLYDTLRNSAPLSANLGLIYMKKGDYIKAKEYMKAAISLDQNNIFYTYNLAVILD
KLSDFKNATACYSKLLNMSKNASERIPLYKVAARLKFIQLHSAHSAIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32927; Mature: 32927

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIVQRNKIYWLRAAANATTLGSMFVCMLICVVILWRSSVTYASENLEIQKVFDSVVKH
CCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
IKADKKYKDLDVIERKSDKFNIKISQNSGKNFDIYSILKKAKDSFELGDSETATSLLNQI
HHCCCCCCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IAKFPYHESALIGLGNIYYANKEFKKAVEIYTRLLKEYPSNPYVLKNFLTIISQYDPNLA
HHHCCCCCCCEEECCCEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
LSEMLKLYDTLRNSAPLSANLGLIYMKKGDYIKAKEYMKAAISLDQNNIFYTYNLAVILD
HHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEHHHHHHHHHHEECCCCEEEEEHHHHHHH
KLSDFKNATACYSKLLNMSKNASERIPLYKVAARLKFIQLHSAHSAIP
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLRIVQRNKIYWLRAAANATTLGSMFVCMLICVVILWRSSVTYASENLEIQKVFDSVVKH
CCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
IKADKKYKDLDVIERKSDKFNIKISQNSGKNFDIYSILKKAKDSFELGDSETATSLLNQI
HHCCCCCCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IAKFPYHESALIGLGNIYYANKEFKKAVEIYTRLLKEYPSNPYVLKNFLTIISQYDPNLA
HHHCCCCCCCEEECCCEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
LSEMLKLYDTLRNSAPLSANLGLIYMKKGDYIKAKEYMKAAISLDQNNIFYTYNLAVILD
HHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEHHHHHHHHHHEECCCCEEEEEHHHHHHH
KLSDFKNATACYSKLLNMSKNASERIPLYKVAARLKFIQLHSAHSAIP
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA