Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190571056
Identifier: 190571056
GI number: 190571056
Start: 712843
End: 714018
Strand: Reverse
Name: 190571056
Synonym: WPa_0649
Alternate gene names: NA
Gene position: 714018-712843 (Counterclockwise)
Preceding gene: 190571059
Following gene: 190571055
Centisome position: 48.16
GC content: 39.46
Gene sequence:
>1176_bases ATGAATTTTAACATTTTTCAAAGAAAGAAAAGCAGTGAATACTCTGCTTTGCAACTAATGATGGAACCAAGTTGGAGTAG GCGTGATTATGTAAGTTTTGCTGAGGAAGGTTACATAAAAAATGTTATTGCCTTTCGAGCAATTAATATGATCGCAAGTG CTGCATCTTCGGTACCTTTTATTCTCTGCCAGCTTACTGACCAGGGAAAATCACAACTAAAAGCACATCCGTTACTGAAG TTACTTTATTCTCCTAATCCAATGACATCAAAATCAGAATTTATTGAGGGGATTGTAACTTATCGGTTAGTTAACGGCAA TTCTTATATATTGATGATTGAGCTGCAGAACAAACCAACAGAGCTTTATCTTCTGCGCCCTGATAGAGTTGAAATTGTTC CGGGGAGAAGTAACGTTCCTTATGCCTATCGTTATACCGTAAATAACAACAGTTATGACTTTAAAGTTGATAAATTGACT GGGCGTTCAACAGTACTGCATCTTAAAACCTTTAACCCTTTGAATGATTGGTATGGACTTTCACCAATTGAGGCAGCTGC ATATAGTATAGATCAGCATAATCAGGCTGGTGCTTGGAATCAGGCAATGCTGCAAAATGGAGCAAGACCAAGTGGTGCAA TAGTTGTGAAATCAGAAAAGGATGGAAGCGTTGGAAACTTAAGTCAAGAGCAGTACCAACGCTTAAAAGCGCAGATAAAT GATCATTACTCAGGTCCTGTCAACGCTGGAAGACCGATATTACTTGAAGGAGGTTTAGAGTGGAAGGAAATGAGCTTATC ACCGAGGGATATGGATTTTATTGAGTCAAAACATAGCTCAGCTCGTGATATTGCGCTAGCTTTTGGCGTTCCGCCGCAGT TGCTTGGCATACCGGGTGATAACACTTACAGTAATTTAGTTGAAGCACGTCTTTCCCTTTGGGAACAGACGATTTTACCA ACGCTAGAAAATATTATCTGTCACCTGAATTCTTGGCTAGTGCCCAAGTTTGGCAAAGATTTATGTTTGTCATATGATAA AGACGCGATAGAAATTCTAATGGAGAAAAGACAAAAGATGTGGAAATACGTGCAAAACGCAAGCTTCATGACGCTCAATG AAAAAAGAGAAGCTTTTGGCTTGCAACCGTTACCCGGTGGTGATAAGTTGAATTGA
Upstream 100 bases:
>100_bases AGTGTCAGCTACTCAGATGATATCATTCTTGTAACACCAATTGATATAATTCAACTATAATTTTAATCTTTTAACAAATT TAATTTTTCAGGAGGCACAT
Downstream 100 bases:
>100_bases TGTTTATATAGTATAGATATTTATACTAAGCTGTAAGAAATTAGAGGTATTTTATGTATCAAGAACAAGAAAATTCAGTA AGTAATTCTCGATTGACTCT
Product: phage portal protein, HK97 family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MNFNIFQRKKSSEYSALQLMMEPSWSRRDYVSFAEEGYIKNVIAFRAINMIASAASSVPFILCQLTDQGKSQLKAHPLLK LLYSPNPMTSKSEFIEGIVTYRLVNGNSYILMIELQNKPTELYLLRPDRVEIVPGRSNVPYAYRYTVNNNSYDFKVDKLT GRSTVLHLKTFNPLNDWYGLSPIEAAAYSIDQHNQAGAWNQAMLQNGARPSGAIVVKSEKDGSVGNLSQEQYQRLKAQIN DHYSGPVNAGRPILLEGGLEWKEMSLSPRDMDFIESKHSSARDIALAFGVPPQLLGIPGDNTYSNLVEARLSLWEQTILP TLENIICHLNSWLVPKFGKDLCLSYDKDAIEILMEKRQKMWKYVQNASFMTLNEKREAFGLQPLPGGDKLN
Sequences:
>Translated_391_residues MNFNIFQRKKSSEYSALQLMMEPSWSRRDYVSFAEEGYIKNVIAFRAINMIASAASSVPFILCQLTDQGKSQLKAHPLLK LLYSPNPMTSKSEFIEGIVTYRLVNGNSYILMIELQNKPTELYLLRPDRVEIVPGRSNVPYAYRYTVNNNSYDFKVDKLT GRSTVLHLKTFNPLNDWYGLSPIEAAAYSIDQHNQAGAWNQAMLQNGARPSGAIVVKSEKDGSVGNLSQEQYQRLKAQIN DHYSGPVNAGRPILLEGGLEWKEMSLSPRDMDFIESKHSSARDIALAFGVPPQLLGIPGDNTYSNLVEARLSLWEQTILP TLENIICHLNSWLVPKFGKDLCLSYDKDAIEILMEKRQKMWKYVQNASFMTLNEKREAFGLQPLPGGDKLN >Mature_391_residues MNFNIFQRKKSSEYSALQLMMEPSWSRRDYVSFAEEGYIKNVIAFRAINMIASAASSVPFILCQLTDQGKSQLKAHPLLK LLYSPNPMTSKSEFIEGIVTYRLVNGNSYILMIELQNKPTELYLLRPDRVEIVPGRSNVPYAYRYTVNNNSYDFKVDKLT GRSTVLHLKTFNPLNDWYGLSPIEAAAYSIDQHNQAGAWNQAMLQNGARPSGAIVVKSEKDGSVGNLSQEQYQRLKAQIN DHYSGPVNAGRPILLEGGLEWKEMSLSPRDMDFIESKHSSARDIALAFGVPPQLLGIPGDNTYSNLVEARLSLWEQTILP TLENIICHLNSWLVPKFGKDLCLSYDKDAIEILMEKRQKMWKYVQNASFMTLNEKREAFGLQPLPGGDKLN
Specific function: Unknown
COG id: COG4695
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phage portal family. HK97 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006944 - InterPro: IPR006427 [H]
Pfam domain/function: PF04860 Phage_portal [H]
EC number: NA
Molecular weight: Translated: 44257; Mature: 44257
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFNIFQRKKSSEYSALQLMMEPSWSRRDYVSFAEEGYIKNVIAFRAINMIASAASSVPF CCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCE ILCQLTDQGKSQLKAHPLLKLLYSPNPMTSKSEFIEGIVTYRLVNGNSYILMIELQNKPT EEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEEEECCCEEEEEEEECCCCC ELYLLRPDRVEIVPGRSNVPYAYRYTVNNNSYDFKVDKLTGRSTVLHLKTFNPLNDWYGL EEEEECCCCEEEECCCCCCCEEEEEEECCCCEEEEEEEECCCEEEEEEEECCCCHHHCCC SPIEAAAYSIDQHNQAGAWNQAMLQNGARPSGAIVVKSEKDGSVGNLSQEQYQRLKAQIN CCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHC DHYSGPVNAGRPILLEGGLEWKEMSLSPRDMDFIESKHSSARDIALAFGVPPQLLGIPGD CCCCCCCCCCCEEEEECCCCHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCHHHEECCCC NTYSNLVEARLSLWEQTILPTLENIICHLNSWLVPKFGKDLCLSYDKDAIEILMEKRQKM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHH WKYVQNASFMTLNEKREAFGLQPLPGGDKLN HHHHHCCCEEEECCHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNFNIFQRKKSSEYSALQLMMEPSWSRRDYVSFAEEGYIKNVIAFRAINMIASAASSVPF CCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCE ILCQLTDQGKSQLKAHPLLKLLYSPNPMTSKSEFIEGIVTYRLVNGNSYILMIELQNKPT EEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEEEECCCEEEEEEEECCCCC ELYLLRPDRVEIVPGRSNVPYAYRYTVNNNSYDFKVDKLTGRSTVLHLKTFNPLNDWYGL EEEEECCCCEEEECCCCCCCEEEEEEECCCCEEEEEEEECCCEEEEEEEECCCCHHHCCC SPIEAAAYSIDQHNQAGAWNQAMLQNGARPSGAIVVKSEKDGSVGNLSQEQYQRLKAQIN CCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHC DHYSGPVNAGRPILLEGGLEWKEMSLSPRDMDFIESKHSSARDIALAFGVPPQLLGIPGD CCCCCCCCCCCEEEEECCCCHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCHHHEECCCC NTYSNLVEARLSLWEQTILPTLENIICHLNSWLVPKFGKDLCLSYDKDAIEILMEKRQKM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHH WKYVQNASFMTLNEKREAFGLQPLPGGDKLN HHHHHCCCEEEECCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA