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The map label for this gene is recJ [H]

Identifier: 190571037

GI number: 190571037

Start: 687357

End: 689096

Strand: Direct

Name: recJ [H]

Synonym: WPa_0630

Alternate gene names: 190571037

Gene position: 687357-689096 (Clockwise)

Preceding gene: 190571035

Following gene: 190571039

Centisome position: 46.37

GC content: 37.01

Gene sequence:

>1740_bases
ATGCTACTTGATATTGAAAAACGCAGCATAACAAATGCACTGTGGAAGTTACAAGAAGCAGATCAAAGGGAGATTTTTAC
TCTTATACAGAGATTTGAGTTGCCAGAAATATTAGCAAGAATATTAGTTGCTCGTGGTGTTAACATAGAAAATGCACATG
ACTTCTTACACCCACTAATCAGATCGCTATTACCAGATCCCTTTCACCTCCTTGATATGGATAAAGCTGTTTCTCACATA
ATAAAAGCAATAAACAATAATGAGAATATTGCAATATTTGGTGATTACGATGTTGATGGTGCAACGTCATCAGCATTGAT
TAATAGGTACCTAAGAGCGATTGGGACACACTCTATAATCTATATTCCAGATCGTGTTGATGAGGGCTATGGATTGAACA
CAGATGCTTTATTACAACTTAAAAAGAATGGTATTGATTTATGTATTTCTGTTGATTGCGGTACGCTTGCATATCAACCA
ATAGAAGATGCAAAAGTCTTTGGACTTGATATTATAGTTGTCGACCATCACCTTGGAACAGAAAAATTACCAAGTGCTGT
AGCAGTTGTTAATCCCAACCGCCTTGATGAGAGCTCTCCTTATAATAACTTAGCAGCAGTTGGAGTGTCATTTCTGCTAA
TTGTTGCTCTTAACAGAATCCTACGTGAGCAAGGATTTTTTACCAACAAAAAAGAACCAGATTTATTTGATCTACTGGAT
TTGGTTGCTCTTGGAACTGTTTGCGATGTTATGCAGATTACAGGCCTAAATAGGGCTTTTGTTTTACAAGGATTAAAAGT
TATGTCAGCAAGAAAAAATGTTGGCTTACGTGTTTTGTTTGACGCTTTGGGAATCCTTGAAAAACCAAGTGTTTCACGAT
TAGGGTTTAGTATTGGGCCATGTATAAATGCCGGAGGAAGAATTGGAGAAGCATCGCTCGGTGCAAGGTTGCTTTCCACC
GATGATGATGATGATGCACATTCAATCGCGCTAAAACTAATAGATTTGAATAATGCAAGAAAAATGCTAGAAAATGAGGC
TATTTTGGAAGCCACAACACAAGCGGAAAATTTTGCCCACTTAGGTGTAAATTTTATAATGGTAAGTGGTAATTGGCACC
AGGGAATAATTGGTATCATTGCATCAAGACTAAAGGAGCAATTTCACTTACCAACGATAGTAATATCTTTAAATAATGGA
ATAGGAAAAGCAAGCTGCAGATCAATTTCTGGGGTAGATATTGGTGCTGCGGTTCTTTCTGCAAAATTTACCAACCTAAT
CATTGAAGGTGGTGGTCACAGTATGGCAGCAGGATTTTCGATTAAGGAAGATAAAATAAGTGATCTACATGATTTCTTTA
CTGAAAGATTTGCAAACTCTACAAATGACAAAATCATAAAAGCTGATGGTATAGTAACAGCTAAAGCAATAAACTTATCC
CTTTGGAATCAACTGCAGCGCTTAGAGCCATTTGGAGCTGGCAATCCTGAACCGAGATTCATCATTCAAGGAGCAAAGAT
AAGAAAGCCGGAAGTTATAGGAGTTGACCATATAAAATGTTTTATTGCTGACGATAATGTTATGGTCAAAGCTATTGCGT
TTCGCTGTGCAAATACTGAGCTTGGCTCTGCTATTATGCAGGGTAATGTTAAAGCCATTTTGGGTAAAATCTCTATGAAT
TACTGGAATGGCAATGAATTTGTGCAGTTTTTAATAGAGGATGTATTGACCATTAGTTGA

Upstream 100 bases:

>100_bases
GTGACACTCTCCTATATCTTTCTTTAGGTTATACAGAAGTCTAACACAATTATAGAACAAGCGTAAAAGTTCTGGTAAAG
TAGTTTTATTTACAAAAAAT

Downstream 100 bases:

>100_bases
GTTACTATTTTACAATAATTACCTATCAATCTCACCAAAGACTATGTCGAGTGAACCGATAATTGCTGCAATGTCAGCAA
GCATGTGTCCTTTTGCCATG

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MLLDIEKRSITNALWKLQEADQREIFTLIQRFELPEILARILVARGVNIENAHDFLHPLIRSLLPDPFHLLDMDKAVSHI
IKAINNNENIAIFGDYDVDGATSSALINRYLRAIGTHSIIYIPDRVDEGYGLNTDALLQLKKNGIDLCISVDCGTLAYQP
IEDAKVFGLDIIVVDHHLGTEKLPSAVAVVNPNRLDESSPYNNLAAVGVSFLLIVALNRILREQGFFTNKKEPDLFDLLD
LVALGTVCDVMQITGLNRAFVLQGLKVMSARKNVGLRVLFDALGILEKPSVSRLGFSIGPCINAGGRIGEASLGARLLST
DDDDDAHSIALKLIDLNNARKMLENEAILEATTQAENFAHLGVNFIMVSGNWHQGIIGIIASRLKEQFHLPTIVISLNNG
IGKASCRSISGVDIGAAVLSAKFTNLIIEGGGHSMAAGFSIKEDKISDLHDFFTERFANSTNDKIIKADGIVTAKAINLS
LWNQLQRLEPFGAGNPEPRFIIQGAKIRKPEVIGVDHIKCFIADDNVMVKAIAFRCANTELGSAIMQGNVKAILGKISMN
YWNGNEFVQFLIEDVLTIS

Sequences:

>Translated_579_residues
MLLDIEKRSITNALWKLQEADQREIFTLIQRFELPEILARILVARGVNIENAHDFLHPLIRSLLPDPFHLLDMDKAVSHI
IKAINNNENIAIFGDYDVDGATSSALINRYLRAIGTHSIIYIPDRVDEGYGLNTDALLQLKKNGIDLCISVDCGTLAYQP
IEDAKVFGLDIIVVDHHLGTEKLPSAVAVVNPNRLDESSPYNNLAAVGVSFLLIVALNRILREQGFFTNKKEPDLFDLLD
LVALGTVCDVMQITGLNRAFVLQGLKVMSARKNVGLRVLFDALGILEKPSVSRLGFSIGPCINAGGRIGEASLGARLLST
DDDDDAHSIALKLIDLNNARKMLENEAILEATTQAENFAHLGVNFIMVSGNWHQGIIGIIASRLKEQFHLPTIVISLNNG
IGKASCRSISGVDIGAAVLSAKFTNLIIEGGGHSMAAGFSIKEDKISDLHDFFTERFANSTNDKIIKADGIVTAKAINLS
LWNQLQRLEPFGAGNPEPRFIIQGAKIRKPEVIGVDHIKCFIADDNVMVKAIAFRCANTELGSAIMQGNVKAILGKISMN
YWNGNEFVQFLIEDVLTIS
>Mature_579_residues
MLLDIEKRSITNALWKLQEADQREIFTLIQRFELPEILARILVARGVNIENAHDFLHPLIRSLLPDPFHLLDMDKAVSHI
IKAINNNENIAIFGDYDVDGATSSALINRYLRAIGTHSIIYIPDRVDEGYGLNTDALLQLKKNGIDLCISVDCGTLAYQP
IEDAKVFGLDIIVVDHHLGTEKLPSAVAVVNPNRLDESSPYNNLAAVGVSFLLIVALNRILREQGFFTNKKEPDLFDLLD
LVALGTVCDVMQITGLNRAFVLQGLKVMSARKNVGLRVLFDALGILEKPSVSRLGFSIGPCINAGGRIGEASLGARLLST
DDDDDAHSIALKLIDLNNARKMLENEAILEATTQAENFAHLGVNFIMVSGNWHQGIIGIIASRLKEQFHLPTIVISLNNG
IGKASCRSISGVDIGAAVLSAKFTNLIIEGGGHSMAAGFSIKEDKISDLHDFFTERFANSTNDKIIKADGIVTAKAINLS
LWNQLQRLEPFGAGNPEPRFIIQGAKIRKPEVIGVDHIKCFIADDNVMVKAIAFRCANTELGSAIMQGNVKAILGKISMN
YWNGNEFVQFLIEDVLTIS

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=565, Percent_Identity=33.6283185840708, Blast_Score=282, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 63377; Mature: 63377

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLDIEKRSITNALWKLQEADQREIFTLIQRFELPEILARILVARGVNIENAHDFLHPLI
CEEECCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
RSLLPDPFHLLDMDKAVSHIIKAINNNENIAIFGDYDVDGATSSALINRYLRAIGTHSII
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEE
YIPDRVDEGYGLNTDALLQLKKNGIDLCISVDCGTLAYQPIEDAKVFGLDIIVVDHHLGT
EECCCCCCCCCCCHHHHHEECCCCCEEEEEECCCCEECCCCCCCEEEEEEEEEEECCCCC
EKLPSAVAVVNPNRLDESSPYNNLAAVGVSFLLIVALNRILREQGFFTNKKEPDLFDLLD
HHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LVALGTVCDVMQITGLNRAFVLQGLKVMSARKNVGLRVLFDALGILEKPSVSRLGFSIGP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCHHHCCCCCCC
CINAGGRIGEASLGARLLSTDDDDDAHSIALKLIDLNNARKMLENEAILEATTQAENFAH
CCCCCCCCCCHHHCCEEECCCCCCCCEEEEEEEEECCHHHHHHHCHHHHHHHHHHHCCEE
LGVNFIMVSGNWHQGIIGIIASRLKEQFHLPTIVISLNNGIGKASCRSISGVDIGAAVLS
CCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHCCCCCCCHHHHHHH
AKFTNLIIEGGGHSMAAGFSIKEDKISDLHDFFTERFANSTNDKIIKADGIVTAKAINLS
HHHHEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEEECHH
LWNQLQRLEPFGAGNPEPRFIIQGAKIRKPEVIGVDHIKCFIADDNVMVKAIAFRCANTE
HHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEECCCEEEEEEECCCEEEEEHHHHHCCCH
LGSAIMQGNVKAILGKISMNYWNGNEFVQFLIEDVLTIS
HHHHHHHCCHHHEEEHHEEEEECHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLDIEKRSITNALWKLQEADQREIFTLIQRFELPEILARILVARGVNIENAHDFLHPLI
CEEECCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
RSLLPDPFHLLDMDKAVSHIIKAINNNENIAIFGDYDVDGATSSALINRYLRAIGTHSII
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEE
YIPDRVDEGYGLNTDALLQLKKNGIDLCISVDCGTLAYQPIEDAKVFGLDIIVVDHHLGT
EECCCCCCCCCCCHHHHHEECCCCCEEEEEECCCCEECCCCCCCEEEEEEEEEEECCCCC
EKLPSAVAVVNPNRLDESSPYNNLAAVGVSFLLIVALNRILREQGFFTNKKEPDLFDLLD
HHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LVALGTVCDVMQITGLNRAFVLQGLKVMSARKNVGLRVLFDALGILEKPSVSRLGFSIGP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCHHHCCCCCCC
CINAGGRIGEASLGARLLSTDDDDDAHSIALKLIDLNNARKMLENEAILEATTQAENFAH
CCCCCCCCCCHHHCCEEECCCCCCCCEEEEEEEEECCHHHHHHHCHHHHHHHHHHHCCEE
LGVNFIMVSGNWHQGIIGIIASRLKEQFHLPTIVISLNNGIGKASCRSISGVDIGAAVLS
CCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHCCCCCCCHHHHHHH
AKFTNLIIEGGGHSMAAGFSIKEDKISDLHDFFTERFANSTNDKIIKADGIVTAKAINLS
HHHHEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEEECHH
LWNQLQRLEPFGAGNPEPRFIIQGAKIRKPEVIGVDHIKCFIADDNVMVKAIAFRCANTE
HHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEECCCEEEEEEECCCEEEEEHHHHHCCCH
LGSAIMQGNVKAILGKISMNYWNGNEFVQFLIEDVLTIS
HHHHHHHCCHHHEEEHHEEEEECHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]