| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is 190571008
Identifier: 190571008
GI number: 190571008
Start: 647286
End: 650186
Strand: Reverse
Name: 190571008
Synonym: WPa_0600
Alternate gene names: NA
Gene position: 650186-647286 (Counterclockwise)
Preceding gene: 190571009
Following gene: 190571007
Centisome position: 43.86
GC content: 33.44
Gene sequence:
>2901_bases ATGATGAGCAGAAAATCATTATTATTGATACTATGTCTTGTAATTACTGGCTGCACAATGGATTGTGTTGAACCTGGGCT GCAGAGCAGAAATACTAGTGTCAGTATAGATGTTCCAGTTCGTGAAGCTGGCGAAGGAGTTAAAATTCATTGGGTTGATT CTGGTCAAGTAATTAGCAAGGATGAGAAAATCAAATTTACTCTTGGTGGGTCAGTAAATTTTTGTCCTCTTAAAGAAGGG AAAAATCCAAAGAGAGTACTTGTGCCCGCTGTATTTTGTGCTAATGATTTAATACCAAATTACAGTAATAAGTTAACTGA TAATGCTAGTCTTGATGAACGAGAAATATGTGGGGATATAGGCTTTGGAAATAATGAATTCTATAGCAATAGACGTTATG TAGATACTGGAATTAAAGCAAATCCTGGTGATAAGTTAAGCTTTAGCTTAGTTCCCAGAGAGATAACGATTGATTATGAC AATCCACAAGGAAAAGGTATCAGTTTTGATGATAATTGCTATAGAACTGAAAAAGGGGATGAAAAAGATAGAGCTACAAT AAGAGACATGCTAAACGGAGGAAAGTTCTTTTGTGGAGAAAGTGGTAAAAGAACTGTAGTAGAATTTCCGCCGCTGAATA AAGAAGAAATGAATAAAAGAAGAGTGCTAGTTGGCAATGGCTACACTCCATATGATAATAAGGTACATTTTAATAAGGAT TATATTCAAAATTCATGGATAAATGGTGCGTTGTTAGATCTACGACGAACTAAAATAGGACTGAATGAATTATGTAATGG GAAAAGGTGTGATTTTAATGAGCTGAACAAATACAGTTCTTATGAACTTAATTGTTACTATCAGAATATATGTTACAACG CAAAAGGTATAGGGGAGAATTGCGTCTCTTCTATAAGGTATGAGAAGTATGATAAAGGAAATACATGTGACATGTATTCT CACCTTAAACGTATTGAGGATGAACTAAAAAAGATTGAAGAAAATAAGAGGGATTCTAAGCAGATTGACATTAATTTAAT ATCAAATTCTAAATTAAACTTCAAAGAGGACAGAGGAGATATTTCTTGGGCCGAAGCTCTTGTTGCAAAAATTGGCGATT TTGATGATCAGGATATTGCTAAAGGTATTCAATGTTTTCCAAATGAGAAAGGTGCGAAAGGAGATAATGTATGTTCACAG ATTAATTATAAATTTGAAGATTACTCTCTGAGATTAAATCATGATTATAAAATAAAAGGTATAACACCTGGTAGTAGTGT GATGCTTGCTATAGCAAGTAATGGCAACTACCAACTTCATAGAGGTGGATATCATGTTGAAGTAACTAGATCATGTAACT TTGATGGTGGTAAAAAATTGTATGTGTACTTAGGTGATAATCCGCCAAGGGATCCATCTGCTCGAAAGACTAATGATTTC AAAAAAGTAAAGAGGTTGGATAAAATAACAGAGGATAATGTAGACTATTACATAATAGATGGAAGTCATTTGGTAAATGA AGAGTCTAAGAAAATATATTTTGGTATTAATGTAGAAAACGTAGAGAAAGATGATATTACGGACAAAGATAGCAAATATT ATGAAGATAACAAATACACAGTAAATTTATTTTTAAAAAGAAAAATAAACGATTTTATTTCATCAACTGTAAACAAGATT TTTGATTTCATAACAGACGGGAGTGAAGACGGAATTAAAATTCCATATGAAGGATATAGAAAGGGGCTTCTACAAGGAAT AAGAGCTTTGCTTATTCTATACGTTATATTTACTGTTGTTGGCTATATGCTTGGAACAATACAATTAAGTAAATTCGATT TTATTATAAGAATATTCAAAATAGCATTTATAGCTTTTGCTTTTAGTGATAGAAGTTGGGAATTCTTTGGTACAACTTTG TCTGGGCTTTTTGTTGAGGGTAGCATTTATTTAGTTGATAGTTTTTCTGGCTATATAGGAGAAGGAGGTAAAAAATTTGC ATTCTTAGATTTAACAGCCGGAGTATTATTTACAGGAGAAACATGGCTGAAATTTTTATCTTTAATGCTATCAGGACCTT TTGGCTTTATTGCATTTTTGGCAATACTTTATGCTACTTTTGTGTTTTTAAGATGCATTATTAGTGCTACGTTTAAGTAT GTAATATCTACTGTTTTAGTGGCATTTTTATTGTCATTGGCACCTTTATTTATCGTATTTATTCTATTTCAACAAACTAA AACATTATTTGATAATTGGATAAAAACGCTGGCTCATGTTTCATTGCAACCAGTCATTTTATTTTCATCCTTGTCTCTTT TAAACCAGTTAATGTATTCAGTTCTATACAACCTCACAAATTTTTCTGCATGCTATCAATGCTTAATTAGTGTAAATTTT TTATCGTATGATCTGTGTCTTATGAAATCAATATTACCTCTTGGGTATAGTCCTGGTACTAGTGTTGATGTTGCGCTCAG TACTGGAGAAAGGGCTGGTGGGCACTTTGCAGCATTACCTATAGATCTAATCCAGGCATTTATATATCTCATCATTGCTA GTGCAATGGAAGCTTTTGTTTCTATATCAGAAACTATGGCGCAGGCGTTGTTCAGCTCTGGTTATGGAGTTGCTCAAAGT GTTAGTCATATTTCTAGGAGCGCATCACAAGCTATGCTGTCAACTGTTGGCCTTGATGATAGAACCCAAAATATGATACA TAACATCAAGCAGGGAATGAGTAAAGATCGTAGCAAAATTGAAGCTAAATTGCCTGATACACCAAAGCAAGCAGATGGGA AAGGGAGTGCTGGCAGAGAAATGAGCAAATCTGAAACACTAAGCCAGCCAGATAAGCAAAAGGATTCTGATAAAACAAAA GGACAAGTCAAGGAAGATTGA
Upstream 100 bases:
>100_bases GAAGAGCAGGTCAGCAATCTGGTACACCAAGTCGAAGACCTCAAATACCACAATCAGCTCAAAGATCAGCACCTAAAATA CCGACAAACACAGGAAATCA
Downstream 100 bases:
>100_bases TGAGATATATGGAGTAACTAATTAAAAAGATATTTGAAGTAAGGTTTTAGAAATTTATTCTGTATTGGAAAAAGTTTAGG TATGCAATCACGCTTAGGCA
Product: TrbL/VirB6 plasmid conjugal transfer family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 966; Mature: 966
Protein sequence:
>966_residues MMSRKSLLLILCLVITGCTMDCVEPGLQSRNTSVSIDVPVREAGEGVKIHWVDSGQVISKDEKIKFTLGGSVNFCPLKEG KNPKRVLVPAVFCANDLIPNYSNKLTDNASLDEREICGDIGFGNNEFYSNRRYVDTGIKANPGDKLSFSLVPREITIDYD NPQGKGISFDDNCYRTEKGDEKDRATIRDMLNGGKFFCGESGKRTVVEFPPLNKEEMNKRRVLVGNGYTPYDNKVHFNKD YIQNSWINGALLDLRRTKIGLNELCNGKRCDFNELNKYSSYELNCYYQNICYNAKGIGENCVSSIRYEKYDKGNTCDMYS HLKRIEDELKKIEENKRDSKQIDINLISNSKLNFKEDRGDISWAEALVAKIGDFDDQDIAKGIQCFPNEKGAKGDNVCSQ INYKFEDYSLRLNHDYKIKGITPGSSVMLAIASNGNYQLHRGGYHVEVTRSCNFDGGKKLYVYLGDNPPRDPSARKTNDF KKVKRLDKITEDNVDYYIIDGSHLVNEESKKIYFGINVENVEKDDITDKDSKYYEDNKYTVNLFLKRKINDFISSTVNKI FDFITDGSEDGIKIPYEGYRKGLLQGIRALLILYVIFTVVGYMLGTIQLSKFDFIIRIFKIAFIAFAFSDRSWEFFGTTL SGLFVEGSIYLVDSFSGYIGEGGKKFAFLDLTAGVLFTGETWLKFLSLMLSGPFGFIAFLAILYATFVFLRCIISATFKY VISTVLVAFLLSLAPLFIVFILFQQTKTLFDNWIKTLAHVSLQPVILFSSLSLLNQLMYSVLYNLTNFSACYQCLISVNF LSYDLCLMKSILPLGYSPGTSVDVALSTGERAGGHFAALPIDLIQAFIYLIIASAMEAFVSISETMAQALFSSGYGVAQS VSHISRSASQAMLSTVGLDDRTQNMIHNIKQGMSKDRSKIEAKLPDTPKQADGKGSAGREMSKSETLSQPDKQKDSDKTK GQVKED
Sequences:
>Translated_966_residues MMSRKSLLLILCLVITGCTMDCVEPGLQSRNTSVSIDVPVREAGEGVKIHWVDSGQVISKDEKIKFTLGGSVNFCPLKEG KNPKRVLVPAVFCANDLIPNYSNKLTDNASLDEREICGDIGFGNNEFYSNRRYVDTGIKANPGDKLSFSLVPREITIDYD NPQGKGISFDDNCYRTEKGDEKDRATIRDMLNGGKFFCGESGKRTVVEFPPLNKEEMNKRRVLVGNGYTPYDNKVHFNKD YIQNSWINGALLDLRRTKIGLNELCNGKRCDFNELNKYSSYELNCYYQNICYNAKGIGENCVSSIRYEKYDKGNTCDMYS HLKRIEDELKKIEENKRDSKQIDINLISNSKLNFKEDRGDISWAEALVAKIGDFDDQDIAKGIQCFPNEKGAKGDNVCSQ INYKFEDYSLRLNHDYKIKGITPGSSVMLAIASNGNYQLHRGGYHVEVTRSCNFDGGKKLYVYLGDNPPRDPSARKTNDF KKVKRLDKITEDNVDYYIIDGSHLVNEESKKIYFGINVENVEKDDITDKDSKYYEDNKYTVNLFLKRKINDFISSTVNKI FDFITDGSEDGIKIPYEGYRKGLLQGIRALLILYVIFTVVGYMLGTIQLSKFDFIIRIFKIAFIAFAFSDRSWEFFGTTL SGLFVEGSIYLVDSFSGYIGEGGKKFAFLDLTAGVLFTGETWLKFLSLMLSGPFGFIAFLAILYATFVFLRCIISATFKY VISTVLVAFLLSLAPLFIVFILFQQTKTLFDNWIKTLAHVSLQPVILFSSLSLLNQLMYSVLYNLTNFSACYQCLISVNF LSYDLCLMKSILPLGYSPGTSVDVALSTGERAGGHFAALPIDLIQAFIYLIIASAMEAFVSISETMAQALFSSGYGVAQS VSHISRSASQAMLSTVGLDDRTQNMIHNIKQGMSKDRSKIEAKLPDTPKQADGKGSAGREMSKSETLSQPDKQKDSDKTK GQVKED >Mature_966_residues MMSRKSLLLILCLVITGCTMDCVEPGLQSRNTSVSIDVPVREAGEGVKIHWVDSGQVISKDEKIKFTLGGSVNFCPLKEG KNPKRVLVPAVFCANDLIPNYSNKLTDNASLDEREICGDIGFGNNEFYSNRRYVDTGIKANPGDKLSFSLVPREITIDYD NPQGKGISFDDNCYRTEKGDEKDRATIRDMLNGGKFFCGESGKRTVVEFPPLNKEEMNKRRVLVGNGYTPYDNKVHFNKD YIQNSWINGALLDLRRTKIGLNELCNGKRCDFNELNKYSSYELNCYYQNICYNAKGIGENCVSSIRYEKYDKGNTCDMYS HLKRIEDELKKIEENKRDSKQIDINLISNSKLNFKEDRGDISWAEALVAKIGDFDDQDIAKGIQCFPNEKGAKGDNVCSQ INYKFEDYSLRLNHDYKIKGITPGSSVMLAIASNGNYQLHRGGYHVEVTRSCNFDGGKKLYVYLGDNPPRDPSARKTNDF KKVKRLDKITEDNVDYYIIDGSHLVNEESKKIYFGINVENVEKDDITDKDSKYYEDNKYTVNLFLKRKINDFISSTVNKI FDFITDGSEDGIKIPYEGYRKGLLQGIRALLILYVIFTVVGYMLGTIQLSKFDFIIRIFKIAFIAFAFSDRSWEFFGTTL SGLFVEGSIYLVDSFSGYIGEGGKKFAFLDLTAGVLFTGETWLKFLSLMLSGPFGFIAFLAILYATFVFLRCIISATFKY VISTVLVAFLLSLAPLFIVFILFQQTKTLFDNWIKTLAHVSLQPVILFSSLSLLNQLMYSVLYNLTNFSACYQCLISVNF LSYDLCLMKSILPLGYSPGTSVDVALSTGERAGGHFAALPIDLIQAFIYLIIASAMEAFVSISETMAQALFSSGYGVAQS VSHISRSASQAMLSTVGLDDRTQNMIHNIKQGMSKDRSKIEAKLPDTPKQADGKGSAGREMSKSETLSQPDKQKDSDKTK GQVKED
Specific function: Unknown
COG id: COG3704
COG function: function code U; Type IV secretory pathway, VirB6 components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trbL/virB6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007688 [H]
Pfam domain/function: PF04610 TrbL [H]
EC number: NA
Molecular weight: Translated: 108517; Mature: 108517
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSRKSLLLILCLVITGCTMDCVEPGLQSRNTSVSIDVPVREAGEGVKIHWVDSGQVISK CCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEECHHHCCCCCEEEEECCCCEECC DEKIKFTLGGSVNFCPLKEGKNPKRVLVPAVFCANDLIPNYSNKLTDNASLDEREICGDI CCEEEEEECCCEEEEECCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCC GFGNNEFYSNRRYVDTGIKANPGDKLSFSLVPREITIDYDNPQGKGISFDDNCYRTEKGD CCCCCCCCCCCEEEECCCCCCCCCCEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCC EKDRATIRDMLNGGKFFCGESGKRTVVEFPPLNKEEMNKRRVLVGNGYTPYDNKVHFNKD CHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCHHHCCCCEEEEECCCCCCCCEEECCHH YIQNSWINGALLDLRRTKIGLNELCNGKRCDFNELNKYSSYELNCYYQNICYNAKGIGEN HHHCCCCCCHHHHHHHHHCCHHHHCCCCCCCHHHHCCCCCEEEEEEEEEEECCCCCCCHH CVSSIRYEKYDKGNTCDMYSHLKRIEDELKKIEENKRDSKQIDINLISNSKLNFKEDRGD HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC ISWAEALVAKIGDFDDQDIAKGIQCFPNEKGAKGDNVCSQINYKFEDYSLRLNHDYKIKG HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCEEECEEEEECCCEEEEE ITPGSSVMLAIASNGNYQLHRGGYHVEVTRSCNFDGGKKLYVYLGDNPPRDPSARKTNDF ECCCCCEEEEEECCCCEEEECCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHH KKVKRLDKITEDNVDYYIIDGSHLVNEESKKIYFGINVENVEKDDITDKDSKYYEDNKYT HHHHHHHHHCCCCCCEEEECCHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEECCCCEE VNLFLKRKINDFISSTVNKIFDFITDGSEDGIKIPYEGYRKGLLQGIRALLILYVIFTVV EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHH GYMLGTIQLSKFDFIIRIFKIAFIAFAFSDRSWEFFGTTLSGLFVEGSIYLVDSFSGYIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCEEEECEEEEEECCCCCCC EGGKKFAFLDLTAGVLFTGETWLKFLSLMLSGPFGFIAFLAILYATFVFLRCIISATFKY CCCCEEEEEEEECCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VISTVLVAFLLSLAPLFIVFILFQQTKTLFDNWIKTLAHVSLQPVILFSSLSLLNQLMYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VLYNLTNFSACYQCLISVNFLSYDLCLMKSILPLGYSPGTSVDVALSTGERAGGHFAALP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEECH IDLIQAFIYLIIASAMEAFVSISETMAQALFSSGYGVAQSVSHISRSASQAMLSTVGLDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH RTQNMIHNIKQGMSKDRSKIEAKLPDTPKQADGKGSAGREMSKSETLSQPDKQKDSDKTK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC GQVKED CCCCCC >Mature Secondary Structure MMSRKSLLLILCLVITGCTMDCVEPGLQSRNTSVSIDVPVREAGEGVKIHWVDSGQVISK CCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEECHHHCCCCCEEEEECCCCEECC DEKIKFTLGGSVNFCPLKEGKNPKRVLVPAVFCANDLIPNYSNKLTDNASLDEREICGDI CCEEEEEECCCEEEEECCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCC GFGNNEFYSNRRYVDTGIKANPGDKLSFSLVPREITIDYDNPQGKGISFDDNCYRTEKGD CCCCCCCCCCCEEEECCCCCCCCCCEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCC EKDRATIRDMLNGGKFFCGESGKRTVVEFPPLNKEEMNKRRVLVGNGYTPYDNKVHFNKD CHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCHHHCCCCEEEEECCCCCCCCEEECCHH YIQNSWINGALLDLRRTKIGLNELCNGKRCDFNELNKYSSYELNCYYQNICYNAKGIGEN HHHCCCCCCHHHHHHHHHCCHHHHCCCCCCCHHHHCCCCCEEEEEEEEEEECCCCCCCHH CVSSIRYEKYDKGNTCDMYSHLKRIEDELKKIEENKRDSKQIDINLISNSKLNFKEDRGD HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC ISWAEALVAKIGDFDDQDIAKGIQCFPNEKGAKGDNVCSQINYKFEDYSLRLNHDYKIKG HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCEEECEEEEECCCEEEEE ITPGSSVMLAIASNGNYQLHRGGYHVEVTRSCNFDGGKKLYVYLGDNPPRDPSARKTNDF ECCCCCEEEEEECCCCEEEECCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHH KKVKRLDKITEDNVDYYIIDGSHLVNEESKKIYFGINVENVEKDDITDKDSKYYEDNKYT HHHHHHHHHCCCCCCEEEECCHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEECCCCEE VNLFLKRKINDFISSTVNKIFDFITDGSEDGIKIPYEGYRKGLLQGIRALLILYVIFTVV EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHH GYMLGTIQLSKFDFIIRIFKIAFIAFAFSDRSWEFFGTTLSGLFVEGSIYLVDSFSGYIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCEEEECEEEEEECCCCCCC EGGKKFAFLDLTAGVLFTGETWLKFLSLMLSGPFGFIAFLAILYATFVFLRCIISATFKY CCCCEEEEEEEECCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VISTVLVAFLLSLAPLFIVFILFQQTKTLFDNWIKTLAHVSLQPVILFSSLSLLNQLMYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VLYNLTNFSACYQCLISVNFLSYDLCLMKSILPLGYSPGTSVDVALSTGERAGGHFAALP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEECH IDLIQAFIYLIIASAMEAFVSISETMAQALFSSGYGVAQSVSHISRSASQAMLSTVGLDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH RTQNMIHNIKQGMSKDRSKIEAKLPDTPKQADGKGSAGREMSKSETLSQPDKQKDSDKTK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC GQVKED CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]