Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is pld [H]
Identifier: 190570878
GI number: 190570878
Start: 484125
End: 484667
Strand: Reverse
Name: pld [H]
Synonym: WPa_0454
Alternate gene names: 190570878
Gene position: 484667-484125 (Counterclockwise)
Preceding gene: 190570880
Following gene: 190570864
Centisome position: 32.69
GC content: 33.89
Gene sequence:
>543_bases ATGTATTTTTTCATGATTAGATATTTATTAATTCTGTTAACTTGCTCACTTTTATCAGGTTGTGTTTCTTGTCCAAGTAC TACTGTATGTTTCACTCCTGGGGAAAATTGCACCAATCTAATAATTGATTCCGTAGAGCATGCTAAAGGGTCTGTGTTAG TTCAAGCATACCAATTTACTTCAAAGCCTATTGCTGAGTCCTTGATTCAAGCCAAAAAACGAGGTGTAGAAGTTAAGATA ATTCTTGATAAGTCGCAAATTCATTCAAAATATAGTGTCATCAATGAGTTATTCGAGCAAGGTATTAAGATTTATATTGA TTTCAAACCAGCAATCGCTCACAATAAAGTCATGATTATTGATAACCAAAAAATCATAACTGGGTCTTTCAATTTCTCTG ACGCCGCACAGAAAAAAAACGCTGAGAATCTACTAATTATAACAGGAGATCCTCCATTAGTCGAGCAATACATCAAAAAC TGGAAGGATCGTCAATCTCAATCTGATGCTTACACACCAAAAGTAGAAGAATCATTACTTTAA
Upstream 100 bases:
>100_bases GTGAAAGATTTCAGCTATCCTCTTTCTTGTTCTTTTTTCTATTTCTGCTAGAATGATGGCTGGTATTATGCCCCTTATGC CTCCGCCGTCAACTGAAAGG
Downstream 100 bases:
>100_bases ATCAGCTTTAAATTCGTCCAATTCCTCAGAGAGATTTTTTACCCGTTCCTCTAGACGATATACCGTAACGTTTAATCCGT TGTTCTGCTCTATAAATTTA
Product: Putative endonuclease protein
Products: NA
Alternate protein names: PLD; Choline phosphatase [H]
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MYFFMIRYLLILLTCSLLSGCVSCPSTTVCFTPGENCTNLIIDSVEHAKGSVLVQAYQFTSKPIAESLIQAKKRGVEVKI ILDKSQIHSKYSVINELFEQGIKIYIDFKPAIAHNKVMIIDNQKIITGSFNFSDAAQKKNAENLLIITGDPPLVEQYIKN WKDRQSQSDAYTPKVEESLL
Sequences:
>Translated_180_residues MYFFMIRYLLILLTCSLLSGCVSCPSTTVCFTPGENCTNLIIDSVEHAKGSVLVQAYQFTSKPIAESLIQAKKRGVEVKI ILDKSQIHSKYSVINELFEQGIKIYIDFKPAIAHNKVMIIDNQKIITGSFNFSDAAQKKNAENLLIITGDPPLVEQYIKN WKDRQSQSDAYTPKVEESLL >Mature_180_residues MYFFMIRYLLILLTCSLLSGCVSCPSTTVCFTPGENCTNLIIDSVEHAKGSVLVQAYQFTSKPIAESLIQAKKRGVEVKI ILDKSQIHSKYSVINELFEQGIKIYIDFKPAIAHNKVMIIDNQKIITGSFNFSDAAQKKNAENLLIITGDPPLVEQYIKN WKDRQSQSDAYTPKVEESLL
Specific function: Could be a virulence factor [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PLD phosphodiesterase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001736 [H]
Pfam domain/function: NA
EC number: =3.1.4.4 [H]
Molecular weight: Translated: 20255; Mature: 20255
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFFMIRYLLILLTCSLLSGCVSCPSTTVCFTPGENCTNLIIDSVEHAKGSVLVQAYQFT CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEHHHC SKPIAESLIQAKKRGVEVKIILDKSQIHSKYSVINELFEQGIKIYIDFKPAIAHNKVMII CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEE DNQKIITGSFNFSDAAQKKNAENLLIITGDPPLVEQYIKNWKDRQSQSDAYTPKVEESLL ECCEEEEECCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCC >Mature Secondary Structure MYFFMIRYLLILLTCSLLSGCVSCPSTTVCFTPGENCTNLIIDSVEHAKGSVLVQAYQFT CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEHHHC SKPIAESLIQAKKRGVEVKIILDKSQIHSKYSVINELFEQGIKIYIDFKPAIAHNKVMII CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEE DNQKIITGSFNFSDAAQKKNAENLLIITGDPPLVEQYIKNWKDRQSQSDAYTPKVEESLL ECCEEEEECCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]