Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is 190570862
Identifier: 190570862
GI number: 190570862
Start: 469306
End: 469809
Strand: Direct
Name: 190570862
Synonym: WPa_0437
Alternate gene names: NA
Gene position: 469306-469809 (Clockwise)
Preceding gene: 190570861
Following gene: 190570863
Centisome position: 31.66
GC content: 35.32
Gene sequence:
>504_bases ATGTTATCAGATTTTTTAACTGATTTTAATAACGCAAAACTGCAGAGCAATTTAATACCAAAAGGTACAATAGTCAAGGT AAAAATGGCAATAAAGCCTGGAGGTTATGAAAATTGGTTCACTAAAAGCTACACTACCGGCAGCATCTATTTAAACGCTG AATTTACCGTCACTGAAGGTCAATATGCAAAACGTAAGATTTTTCAAGTAATTGGTATTAAAAGTGGCAAAGCAAGCGTT GAAGGAGAAGATACTTGGGGAGAATCTGGTCGTTCCATGCTTAGAAGTATTTTGGAGTCAGCACGAAATATTCATGCACA TGACACTTCAGAGAAAGCAGTTATTGCTAGAAAAATCAACTCTATAGCTGATTTTAACGGATTAGAGTTTACTGCAAAAG TTGGTATTGAAGCTGATCGGTATGGAGAAAAAAACAAGATTGCTACTGTTATTACCCCAGAGCAAAATAAAAATGTTGAA AATGATTGGGTTGTTCCGTTTTGA
Upstream 100 bases:
>100_bases CGTGTAGCAAGTAAGCTTGTTGATAAGATAGATAGTCGTTGGAAGCTTGCAGACCAATGGAGTTGATTCCTTTTTTTCAC TTAATTTATAGGAGGACAAT
Downstream 100 bases:
>100_bases GGTATGACGAATATGGATTGCTGCCATTGAGAGGGCTATGAAAGATGCAGTAGGAAAAAACGTAAAGCTGAAAGAAGAAG CGATAAAATGCAGAGTCTTT
Product: Putative phage related protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MLSDFLTDFNNAKLQSNLIPKGTIVKVKMAIKPGGYENWFTKSYTTGSIYLNAEFTVTEGQYAKRKIFQVIGIKSGKASV EGEDTWGESGRSMLRSILESARNIHAHDTSEKAVIARKINSIADFNGLEFTAKVGIEADRYGEKNKIATVITPEQNKNVE NDWVVPF
Sequences:
>Translated_167_residues MLSDFLTDFNNAKLQSNLIPKGTIVKVKMAIKPGGYENWFTKSYTTGSIYLNAEFTVTEGQYAKRKIFQVIGIKSGKASV EGEDTWGESGRSMLRSILESARNIHAHDTSEKAVIARKINSIADFNGLEFTAKVGIEADRYGEKNKIATVITPEQNKNVE NDWVVPF >Mature_167_residues MLSDFLTDFNNAKLQSNLIPKGTIVKVKMAIKPGGYENWFTKSYTTGSIYLNAEFTVTEGQYAKRKIFQVIGIKSGKASV EGEDTWGESGRSMLRSILESARNIHAHDTSEKAVIARKINSIADFNGLEFTAKVGIEADRYGEKNKIATVITPEQNKNVE NDWVVPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18597; Mature: 18597
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSDFLTDFNNAKLQSNLIPKGTIVKVKMAIKPGGYENWFTKSYTTGSIYLNAEFTVTEG CCCHHHHCCCCCEEECCCCCCCEEEEEEEEECCCCCCCCEECCCCCCEEEEEEEEEEECC QYAKRKIFQVIGIKSGKASVEGEDTWGESGRSMLRSILESARNIHAHDTSEKAVIARKIN HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH SIADFNGLEFTAKVGIEADRYGEKNKIATVITPEQNKNVENDWVVPF HHHCCCCCEEEEEECCCHHHCCCCCCEEEEECCCCCCCCCCCEECCC >Mature Secondary Structure MLSDFLTDFNNAKLQSNLIPKGTIVKVKMAIKPGGYENWFTKSYTTGSIYLNAEFTVTEG CCCHHHHCCCCCEEECCCCCCCEEEEEEEEECCCCCCCCEECCCCCCEEEEEEEEEEECC QYAKRKIFQVIGIKSGKASVEGEDTWGESGRSMLRSILESARNIHAHDTSEKAVIARKIN HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH SIADFNGLEFTAKVGIEADRYGEKNKIATVITPEQNKNVENDWVVPF HHHCCCCCEEEEEECCCHHHCCCCCCEEEEECCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA