Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570861
Identifier: 190570861
GI number: 190570861
Start: 468465
End: 469271
Strand: Direct
Name: 190570861
Synonym: WPa_0436
Alternate gene names: NA
Gene position: 468465-469271 (Clockwise)
Preceding gene: 190570860
Following gene: 190570862
Centisome position: 31.6
GC content: 36.68
Gene sequence:
>807_bases ATGTTACAAGACTTTTTCACCATTACTCAAAAAATTCCCTTTTTCAGTGTAAAAGAATACTTGGATGATCAATCGCCAAT ACCAGAAGATATAATCGCACCAAGGATTCTAACTAAAAGAGGTCTATTAGTACTGGGTGGCCCACCTAAGATTGGCAAAA GCGACTTTTTGATCTCTTGGCTTGTTTACATGGCTGCTGGAGTTTCATTTTTGGGTATGACTCCAAGCAAACCTATGAAA ATTTTCTATCTGCAAACTGAAATTGAATATGAATATATGAAAGAACGTTTGCAACAACTTCAACTGGATAACGAACTTTT GAATATAGCTGCCAATAACTTAATCATTACACCAAGAGTACAATTATCTTTCAGCAGTGAAGAAATAGATGAAATTAAAA ATGTTATTAAAGAGCGTTTTAAACCTGATATTATTGCAATCGATCCTCTTCGCAACATCTTCAACTCAAGTGAATATGGC AATGAAAATGACAATAGCGCTATGCTATTCTTTTTGCAAAAAACGCTTGAAAGACTGAGAAATGTTATCAATCCAGATTC GGGCATAATACTCACTCACCACACAAAAAAACTGTCCAAAAAGATGCTGGAAGAAGATCCATTTCAAGGCCTAAGCGGTG CTGGATCTTTACGTGGATTTTATAGCACTGGCATGGTGATGTTTGCTCATGATGAGGAAAGCACTGTCCGTCAAATAGTA TTTGAGCTTCGTAATGGTGAACGTGTAGCAAGTAAGCTTGTTGATAAGATAGATAGTCGTTGGAAGCTTGCAGACCAATG GAGTTGA
Upstream 100 bases:
>100_bases GAAGAACCGCATCTGGGAAAATTACTTACGAAAATTAAAGCTAAGGCTTTTGCTACTGCTGCTTAAATTTCTACTCAAAG TTAACTTTTAGAGGTTATAT
Downstream 100 bases:
>100_bases TTCCTTTTTTTCACTTAATTTATAGGAGGACAATATGTTATCAGATTTTTTAACTGATTTTAATAACGCAAAACTGCAGA GCAATTTAATACCAAAAGGT
Product: Putative phage related protein
Products: NA
Alternate protein names: Bacteriophage-Related Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLQDFFTITQKIPFFSVKEYLDDQSPIPEDIIAPRILTKRGLLVLGGPPKIGKSDFLISWLVYMAAGVSFLGMTPSKPMK IFYLQTEIEYEYMKERLQQLQLDNELLNIAANNLIITPRVQLSFSSEEIDEIKNVIKERFKPDIIAIDPLRNIFNSSEYG NENDNSAMLFFLQKTLERLRNVINPDSGIILTHHTKKLSKKMLEEDPFQGLSGAGSLRGFYSTGMVMFAHDEESTVRQIV FELRNGERVASKLVDKIDSRWKLADQWS
Sequences:
>Translated_268_residues MLQDFFTITQKIPFFSVKEYLDDQSPIPEDIIAPRILTKRGLLVLGGPPKIGKSDFLISWLVYMAAGVSFLGMTPSKPMK IFYLQTEIEYEYMKERLQQLQLDNELLNIAANNLIITPRVQLSFSSEEIDEIKNVIKERFKPDIIAIDPLRNIFNSSEYG NENDNSAMLFFLQKTLERLRNVINPDSGIILTHHTKKLSKKMLEEDPFQGLSGAGSLRGFYSTGMVMFAHDEESTVRQIV FELRNGERVASKLVDKIDSRWKLADQWS >Mature_268_residues MLQDFFTITQKIPFFSVKEYLDDQSPIPEDIIAPRILTKRGLLVLGGPPKIGKSDFLISWLVYMAAGVSFLGMTPSKPMK IFYLQTEIEYEYMKERLQQLQLDNELLNIAANNLIITPRVQLSFSSEEIDEIKNVIKERFKPDIIAIDPLRNIFNSSEYG NENDNSAMLFFLQKTLERLRNVINPDSGIILTHHTKKLSKKMLEEDPFQGLSGAGSLRGFYSTGMVMFAHDEESTVRQIV FELRNGERVASKLVDKIDSRWKLADQWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30774; Mature: 30774
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQDFFTITQKIPFFSVKEYLDDQSPIPEDIIAPRILTKRGLLVLGGPPKIGKSDFLISW CCCHHHHHHHCCCHHHHHHHCCCCCCCCHHHHCCHHHHHCCEEEECCCCCCCCHHHHHHH LVYMAAGVSFLGMTPSKPMKIFYLQTEIEYEYMKERLQQLQLDNELLNIAANNLIITPRV HHHHHCCCHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECEE QLSFSSEEIDEIKNVIKERFKPDIIAIDPLRNIFNSSEYGNENDNSAMLFFLQKTLERLR EEEECHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH NVINPDSGIILTHHTKKLSKKMLEEDPFQGLSGAGSLRGFYSTGMVMFAHDEESTVRQIV HHHCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCEEEEEECCHHHHHHHH FELRNGERVASKLVDKIDSRWKLADQWS HHHCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLQDFFTITQKIPFFSVKEYLDDQSPIPEDIIAPRILTKRGLLVLGGPPKIGKSDFLISW CCCHHHHHHHCCCHHHHHHHCCCCCCCCHHHHCCHHHHHCCEEEECCCCCCCCHHHHHHH LVYMAAGVSFLGMTPSKPMKIFYLQTEIEYEYMKERLQQLQLDNELLNIAANNLIITPRV HHHHHCCCHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECEE QLSFSSEEIDEIKNVIKERFKPDIIAIDPLRNIFNSSEYGNENDNSAMLFFLQKTLERLR EEEECHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH NVINPDSGIILTHHTKKLSKKMLEEDPFQGLSGAGSLRGFYSTGMVMFAHDEESTVRQIV HHHCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCEEEEEECCHHHHHHHH FELRNGERVASKLVDKIDSRWKLADQWS HHHCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA