Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570852
Identifier: 190570852
GI number: 190570852
Start: 455259
End: 456479
Strand: Reverse
Name: 190570852
Synonym: WPa_0427
Alternate gene names: NA
Gene position: 456479-455259 (Counterclockwise)
Preceding gene: 190570853
Following gene: 190570851
Centisome position: 30.79
GC content: 38.98
Gene sequence:
>1221_bases GTGAAAATCACACAAACAGAATGGGCAAGAGAGATAGGAGTATCAAAGCAATATGTCTGTTATTTAGTAAAAAAAGGAAT AGTTGAGCTGGAGGATGGACTCATTGACCGAGAACAAGCAAACAGAGCTATAGAAACAATAAGAGATCCAAGTCAACCAC TGAGAAGAAAAAACTATTCAGAAAGCGGAGAAAAACTTTCTACGATGTTGCTAAAAACTAGAATAAAAAATGAAATGGAA CGTGGCAAATTGCTTGAGGCAAAAGCTAAGGCTGAGATAGGAGAACTTGTAGCAGTAGAAGAAGTAAAAAGTGAGGCATT TAATGTAGCAAGGATTGAGTTTAACAAGCTTGGGCAAAGAGAAGCTTATTACTTATTTAAAGAACACCCTGGTGAAAATA CCTTTGGAGAGTCAGTAAGAGTACCAGCAAACGATGTTTTACATATCTATAAACCACTGAGACCTGGACAAATTAGAGGG GAACCTTGGCTTTCTAACGTGCTTTTAAAACTTTACGAACTTGACCAGTATGATGATGCAGAATTAGTGAGAAAAAAGAC AGCAGCAATGTTTGCTGGATTTATTACAAGACTCGATCCAGAAGCAAATATCATGGGAGAAGGTGAAGCAAGTGAGCAAG GAGTAGCACTATCTGGCCTAGAACCTGGTACTATGCAACTACTTGATCCAGGTGAGGATATAAAGTTTTCAGAGCCATCT GATGTAGGAGGAAGCTATGAAGCATTTATGAGACAGCAACTGAGGGCAATAGCAATAGGCACAGGGATAACATACGAACA ACTAACAGGAGATTTAACCGGTGTTAATTATTCATCAATCAGAGCAGGACTGATAGAGTTTCGTCGTCGATGCGCTATGC TGCAACATAACATTATGGTATTCCAATTTTGTAGACCAGTATGGAGTAGATGGCTAGAGTTAGCAGTACTTTGTGGAGAA CTCCGTATAGATGAAAAAGTGGCAAAAGCAGCGAAAGAAGAAGTAAAATGGATACCACAGGGATTTGATTGGGTGGATCC ACTGAAAGATCAACAAGCACAACAGATGGCAGTAAGAAATGGATTTAAGAGTCGATCGGAAGTAGTATCAGAAATGGGTT ACGATGTAGAAGAAATTGACCAAGAAATAGCAGAAGATCAAAAGCGTGCTGATTCTCTCAACCTTTTCTTTGATTCTGAT GTCAGGACACAAACAAAATAA
Upstream 100 bases:
>100_bases CTGAAATATTGGCAAGTATAAACAGGTAGGGAATTGCTGATACTGGCAAAACCTTTTCAGAGACTCAAGAAGAAAACTCG TAAAAAATAGGCAAAAAAAA
Downstream 100 bases:
>100_bases ATCTCGTTTACTTTATGGAAATTTTACAAACCAACTGGCTATGTAGGCCGATGATGATAGAGCAAAAAAGCTTTGACCTG TTGTCACTATATAAGGGAAA
Product: Putative phage portal protein
Products: NA
Alternate protein names: Lambda Family Phage Portal Protein; Phage Portal Protein; Phage Portal Protein Lambda; Portal Protein; Bacteriophage Capsid Protein; Portal Protein Lambda Family; Phage-Related Portal Protein; Phage Portal Protein Of Lambda Family; Portal Protein B; Portal Protein Putative Prophage; Bacteriophage-Related Protein; Phage Related Protein; Prophage; Head-Tail Preconnector Protein Phage Origin; Portal Protein GPB Of Phage Lambda; Phage Capsid Protein; Head Portal Protein; Phage Protein Gp
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MKITQTEWAREIGVSKQYVCYLVKKGIVELEDGLIDREQANRAIETIRDPSQPLRRKNYSESGEKLSTMLLKTRIKNEME RGKLLEAKAKAEIGELVAVEEVKSEAFNVARIEFNKLGQREAYYLFKEHPGENTFGESVRVPANDVLHIYKPLRPGQIRG EPWLSNVLLKLYELDQYDDAELVRKKTAAMFAGFITRLDPEANIMGEGEASEQGVALSGLEPGTMQLLDPGEDIKFSEPS DVGGSYEAFMRQQLRAIAIGTGITYEQLTGDLTGVNYSSIRAGLIEFRRRCAMLQHNIMVFQFCRPVWSRWLELAVLCGE LRIDEKVAKAAKEEVKWIPQGFDWVDPLKDQQAQQMAVRNGFKSRSEVVSEMGYDVEEIDQEIAEDQKRADSLNLFFDSD VRTQTK
Sequences:
>Translated_406_residues MKITQTEWAREIGVSKQYVCYLVKKGIVELEDGLIDREQANRAIETIRDPSQPLRRKNYSESGEKLSTMLLKTRIKNEME RGKLLEAKAKAEIGELVAVEEVKSEAFNVARIEFNKLGQREAYYLFKEHPGENTFGESVRVPANDVLHIYKPLRPGQIRG EPWLSNVLLKLYELDQYDDAELVRKKTAAMFAGFITRLDPEANIMGEGEASEQGVALSGLEPGTMQLLDPGEDIKFSEPS DVGGSYEAFMRQQLRAIAIGTGITYEQLTGDLTGVNYSSIRAGLIEFRRRCAMLQHNIMVFQFCRPVWSRWLELAVLCGE LRIDEKVAKAAKEEVKWIPQGFDWVDPLKDQQAQQMAVRNGFKSRSEVVSEMGYDVEEIDQEIAEDQKRADSLNLFFDSD VRTQTK >Mature_406_residues MKITQTEWAREIGVSKQYVCYLVKKGIVELEDGLIDREQANRAIETIRDPSQPLRRKNYSESGEKLSTMLLKTRIKNEME RGKLLEAKAKAEIGELVAVEEVKSEAFNVARIEFNKLGQREAYYLFKEHPGENTFGESVRVPANDVLHIYKPLRPGQIRG EPWLSNVLLKLYELDQYDDAELVRKKTAAMFAGFITRLDPEANIMGEGEASEQGVALSGLEPGTMQLLDPGEDIKFSEPS DVGGSYEAFMRQQLRAIAIGTGITYEQLTGDLTGVNYSSIRAGLIEFRRRCAMLQHNIMVFQFCRPVWSRWLELAVLCGE LRIDEKVAKAAKEEVKWIPQGFDWVDPLKDQQAQQMAVRNGFKSRSEVVSEMGYDVEEIDQEIAEDQKRADSLNLFFDSD VRTQTK
Specific function: Unknown
COG id: COG5511
COG function: function code R; Bacteriophage capsid protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46189; Mature: 46189
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITQTEWAREIGVSKQYVCYLVKKGIVELEDGLIDREQANRAIETIRDPSQPLRRKNYS CCCCHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCCC ESGEKLSTMLLKTRIKNEMERGKLLEAKAKAEIGELVAVEEVKSEAFNVARIEFNKLGQR CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCH EAYYLFKEHPGENTFGESVRVPANDVLHIYKPLRPGQIRGEPWLSNVLLKLYELDQYDDA HHEEEEECCCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH ELVRKKTAAMFAGFITRLDPEANIMGEGEASEQGVALSGLEPGTMQLLDPGEDIKFSEPS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCC DVGGSYEAFMRQQLRAIAIGTGITYEQLTGDLTGVNYSSIRAGLIEFRRRCAMLQHNIMV CCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FQFCRPVWSRWLELAVLCGELRIDEKVAKAAKEEVKWIPQGFDWVDPLKDQQAQQMAVRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GFKSRSEVVSEMGYDVEEIDQEIAEDQKRADSLNLFFDSDVRTQTK CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC >Mature Secondary Structure MKITQTEWAREIGVSKQYVCYLVKKGIVELEDGLIDREQANRAIETIRDPSQPLRRKNYS CCCCHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCCC ESGEKLSTMLLKTRIKNEMERGKLLEAKAKAEIGELVAVEEVKSEAFNVARIEFNKLGQR CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCH EAYYLFKEHPGENTFGESVRVPANDVLHIYKPLRPGQIRGEPWLSNVLLKLYELDQYDDA HHEEEEECCCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH ELVRKKTAAMFAGFITRLDPEANIMGEGEASEQGVALSGLEPGTMQLLDPGEDIKFSEPS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCC DVGGSYEAFMRQQLRAIAIGTGITYEQLTGDLTGVNYSSIRAGLIEFRRRCAMLQHNIMV CCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FQFCRPVWSRWLELAVLCGELRIDEKVAKAAKEEVKWIPQGFDWVDPLKDQQAQQMAVRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GFKSRSEVVSEMGYDVEEIDQEIAEDQKRADSLNLFFDSDVRTQTK CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA