BacMap

Definition	Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome.
Accession	NC_010981
Length	1,482,455

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The map label for this gene is yahD [C]

Identifier: 190570839

GI number: 190570839

Start: 447124

End: 447834

Strand: Reverse

Name: yahD [C]

Synonym: WPa_0414

Alternate gene names: 190570839

Gene position: 447834-447124 (Counterclockwise)

Preceding gene: 190570840

Following gene: 190570838

Centisome position: 30.21

GC content: 36.71

Gene sequence:

>711_bases
ATGAAGTTTAGCAAAGAATCTTTTAGTAAGTTTTGTAAAGAAGTATCAAGTAAGGATATTAATAAAAGAAATGAAGAAGG
AGAGACGATATTACACCAAGCAGTAGAAATCTCCAATTACAAAACAGTGAGGTTCTTAATAAAGAAAGGAGCAGAGGTAA
ATGCAAGAGATAAAAATGGTTATACACCTCTGCACTGTGCAGTATTTGCGAAAAGCTTAGAAAATGTAAAAGTGCTGCTA
AGAGAAGGAGCGGAAGTAAATGCTACTCAATATGTCACTGGATGTACGCCACTCCACTCTGCGTGCAAAATAGGAGGAGC
AGGAGTTGAAATAATAAAAGAGCTAGTGAAGGCCGGAGCTGAAGTTAATCAACTGAATAAGTATGGTGCAACACCAATGT
ATTACATCTGGGAAAGTGAAAAGTATTGCCTATGTGATAGCAAAGAGAGTGAAAAGGCAAGTAAATTTTTGAGAGAAAAA
GGAGGAATAACAAAAAGTAGAGAACTGACGTGCTATGGAATAGAGGGGCTAGTGGGAGAAATAGCAGACATGTTGAATGG
AAGCTACATGCCGGAGCTAAAAATAATAGAGATAGGAGAAATAAGAAAGAGAGACAAATCACTAATAAAGGAAGAATGTG
AAAATTTAGCAAGCAAAATAATGAGCCAAGTAAATGAGATGATAGATGAGGTGGTGAAAAGGAAGGCTTAG

Upstream 100 bases:

>100_bases
GGACTTGCTTTCTCATGCTAAAAAGGACATGACTTGAATAGCGGCAGGTAAATATAAGAAATTTGTCTGGCGCTAGAAAA
GCTAATTTTGTGAGGTAAGT

Downstream 100 bases:

>100_bases
GTTTAAAGAAAGGTAGGGGTAGATTATGATAAAGCTTGGTAAGAAAGAGAAATCTCTATTAGAGAGCTCATTTAAAAAGA
AAGAGACGAAAAGGGAACTA

Product: ankyrin repeat domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKFSKESFSKFCKEVSSKDINKRNEEGETILHQAVEISNYKTVRFLIKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLL
REGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLNKYGATPMYYIWESEKYCLCDSKESEKASKFLREK
GGITKSRELTCYGIEGLVGEIADMLNGSYMPELKIIEIGEIRKRDKSLIKEECENLASKIMSQVNEMIDEVVKRKA

Sequences:

>Translated_236_residues
MKFSKESFSKFCKEVSSKDINKRNEEGETILHQAVEISNYKTVRFLIKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLL
REGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLNKYGATPMYYIWESEKYCLCDSKESEKASKFLREK
GGITKSRELTCYGIEGLVGEIADMLNGSYMPELKIIEIGEIRKRDKSLIKEECENLASKIMSQVNEMIDEVVKRKA
>Mature_236_residues
MKFSKESFSKFCKEVSSKDINKRNEEGETILHQAVEISNYKTVRFLIKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLL
REGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLNKYGATPMYYIWESEKYCLCDSKESEKASKFLREK
GGITKSRELTCYGIEGLVGEIADMLNGSYMPELKIIEIGEIRKRDKSLIKEECENLASKIMSQVNEMIDEVVKRKA

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI134948558, Length=114, Percent_Identity=42.1052631578947, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI134948605, Length=114, Percent_Identity=42.1052631578947, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI304361760, Length=127, Percent_Identity=37.007874015748, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI304361757, Length=127, Percent_Identity=37.007874015748, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI68131557, Length=127, Percent_Identity=37.007874015748, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI24233530, Length=127, Percent_Identity=39.3700787401575, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI157743284, Length=115, Percent_Identity=40, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI157266328, Length=134, Percent_Identity=38.8059701492537, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI256574792, Length=157, Percent_Identity=34.3949044585987, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI164664508, Length=137, Percent_Identity=35.7664233576642, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI89363047, Length=116, Percent_Identity=39.6551724137931, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI87239981, Length=137, Percent_Identity=36.4963503649635, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI187608777, Length=115, Percent_Identity=38.2608695652174, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI28605137, Length=113, Percent_Identity=38.0530973451327, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI4506217, Length=113, Percent_Identity=38.0530973451327, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI41350198, Length=106, Percent_Identity=39.622641509434, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI56676397, Length=114, Percent_Identity=40.3508771929825, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI52486251, Length=135, Percent_Identity=35.5555555555556, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI52486194, Length=135, Percent_Identity=35.5555555555556, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI30425444, Length=126, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI70780355, Length=152, Percent_Identity=32.2368421052632, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI18252778, Length=116, Percent_Identity=32.7586206896552, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI70780353, Length=152, Percent_Identity=32.2368421052632, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI70780359, Length=152, Percent_Identity=32.2368421052632, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI70780357, Length=113, Percent_Identity=37.1681415929204, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI215598574, Length=113, Percent_Identity=37.1681415929204, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI13376842, Length=130, Percent_Identity=35.3846153846154, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI188595682, Length=115, Percent_Identity=36.5217391304348, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI52426737, Length=115, Percent_Identity=36.5217391304348, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI16975496, Length=116, Percent_Identity=37.9310344827586, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI215820635, Length=111, Percent_Identity=36.9369369369369, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI63003907, Length=111, Percent_Identity=36.9369369369369, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI32967601, Length=144, Percent_Identity=32.6388888888889, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI115533713, Length=181, Percent_Identity=32.5966850828729, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17561074, Length=80, Percent_Identity=42.5, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71983513, Length=117, Percent_Identity=34.1880341880342, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71983519, Length=117, Percent_Identity=34.1880341880342, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24654624, Length=134, Percent_Identity=35.8208955223881, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI161082089, Length=160, Percent_Identity=31.875, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI281359521, Length=120, Percent_Identity=35.8333333333333, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281359519, Length=120, Percent_Identity=35.8333333333333, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28558752, Length=120, Percent_Identity=35.8333333333333, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28558750, Length=120, Percent_Identity=35.8333333333333, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28558756, Length=120, Percent_Identity=35.8333333333333, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28558754, Length=120, Percent_Identity=35.8333333333333, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI161082085, Length=160, Percent_Identity=31.875, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI161082099, Length=160, Percent_Identity=31.875, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45553307, Length=111, Percent_Identity=36.9369369369369, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24644921, Length=111, Percent_Identity=36.9369369369369, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24644919, Length=111, Percent_Identity=36.9369369369369, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI161082110, Length=160, Percent_Identity=31.875, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21356741, Length=142, Percent_Identity=32.3943661971831, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI161082106, Length=160, Percent_Identity=31.875, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI161082096, Length=160, Percent_Identity=31.875, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI161082081, Length=160, Percent_Identity=31.875, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581260, Length=115, Percent_Identity=37.3913043478261, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24581258, Length=115, Percent_Identity=37.3913043478261, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI161077991, Length=121, Percent_Identity=38.8429752066116, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI161077993, Length=105, Percent_Identity=41.9047619047619, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24643883, Length=121, Percent_Identity=38.8429752066116, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17998549, Length=112, Percent_Identity=36.6071428571429, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221472807, Length=112, Percent_Identity=36.6071428571429, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45552223, Length=112, Percent_Identity=36.6071428571429, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571867, Length=125, Percent_Identity=36, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI28571865, Length=125, Percent_Identity=36, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 26452; Mature: 26452

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSKESFSKFCKEVSSKDINKRNEEGETILHQAVEISNYKTVRFLIKKGAEVNARDKNG
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC
YTPLHCAVFAKSLENVKVLLREGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHCCCCHHHHHHHHHHCCC
EVNQLNKYGATPMYYIWESEKYCLCDSKESEKASKFLREKGGITKSRELTCYGIEGLVGE
HHHHHHHHCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECHHHHHHH
IADMLNGSYMPELKIIEIGEIRKRDKSLIKEECENLASKIMSQVNEMIDEVVKRKA
HHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFSKESFSKFCKEVSSKDINKRNEEGETILHQAVEISNYKTVRFLIKKGAEVNARDKNG
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC
YTPLHCAVFAKSLENVKVLLREGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHCCCCHHHHHHHHHHCCC
EVNQLNKYGATPMYYIWESEKYCLCDSKESEKASKFLREKGGITKSRELTCYGIEGLVGE
HHHHHHHHCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECHHHHHHH
IADMLNGSYMPELKIIEIGEIRKRDKSLIKEECENLASKIMSQVNEMIDEVVKRKA
HHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA