Definition Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome.
Accession NC_010981
Length 1,482,455

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The map label for this gene is acm [H]

Identifier: 190570817

GI number: 190570817

Start: 409039

End: 409671

Strand: Direct

Name: acm [H]

Synonym: WPa_0386

Alternate gene names: 190570817

Gene position: 409039-409671 (Clockwise)

Preceding gene: 190570815

Following gene: 190570819

Centisome position: 27.59

GC content: 37.12

Gene sequence:

>633_bases
ATGAGTGAAAAAGGTATAGACGTATCTCATTGGAATGGAGAGATTGATTGGTTGAAAGTTGCAAAGGATGAGGTAAGGTT
TGCATTTGCCAAAGCAACTGAGGGAGAAACTTTTCAAGACACTAAATTTGGACAAAATTTTCAAAGTATGAAAGATAATA
ATGTGCAAGCTGGGGCATATCACGTATTTAGGATGACCTCAACACCTGAAGGTCAGTTGAATAACATAGTTAACGAACTT
AAAAAAGCTAATTTTGAGCCAGGTACAAATAAGTTAGCTGTTAGTGCTACAACTGGTATTTGCGAAGGAAGAACAACAAA
ATGTGATGATCCTACAAAACACACTAACACACAGAGAGCCGAAAAACTTCATTCTTTATTGACTCAATTGAATGAAAAAG
GATACAGTCCAATTGTATATGCTTCACCAAAAACGTGGAATGATTACTATACACAAGAAGAACATAATTTTTCTCACTAC
CCATTATGGGTTGCTGATTGGAGAGGAAGATCGGAGCCTGAATTACCTAAAGATTGGAAGGATGCGGGTAAAAACTATAC
TTATTGGAATTACACCTCTCAAGGAGAAGTAAACGGAATAGAGGGCCAAGTCCCGCTAGACCAAACTTTTTGA

Upstream 100 bases:

>100_bases
TGTTTTAGTATAAAATTGTTTACAATATGCTCACAAGATATTCATTAAATTTTCACTATTATATTCTATATTCAACATTT
ATTGTAATTATGAGGTTAGT

Downstream 100 bases:

>100_bases
TATCCTAAAACTATAAAGTAGTGCTAGGGCCTAGCACTACTTTAACAGAATTCAATATTCTTGTTTTTTCCCCACCTAAA
CTCAAGTTATATACAACTTT

Product: glycoside hydrolase, family 25

Products: NA

Alternate protein names: 1,4-beta-N-acetylmuramidase M1 [H]

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSEKGIDVSHWNGEIDWLKVAKDEVRFAFAKATEGETFQDTKFGQNFQSMKDNNVQAGAYHVFRMTSTPEGQLNNIVNEL
KKANFEPGTNKLAVSATTGICEGRTTKCDDPTKHTNTQRAEKLHSLLTQLNEKGYSPIVYASPKTWNDYYTQEEHNFSHY
PLWVADWRGRSEPELPKDWKDAGKNYTYWNYTSQGEVNGIEGQVPLDQTF

Sequences:

>Translated_210_residues
MSEKGIDVSHWNGEIDWLKVAKDEVRFAFAKATEGETFQDTKFGQNFQSMKDNNVQAGAYHVFRMTSTPEGQLNNIVNEL
KKANFEPGTNKLAVSATTGICEGRTTKCDDPTKHTNTQRAEKLHSLLTQLNEKGYSPIVYASPKTWNDYYTQEEHNFSHY
PLWVADWRGRSEPELPKDWKDAGKNYTYWNYTSQGEVNGIEGQVPLDQTF
>Mature_209_residues
SEKGIDVSHWNGEIDWLKVAKDEVRFAFAKATEGETFQDTKFGQNFQSMKDNNVQAGAYHVFRMTSTPEGQLNNIVNELK
KANFEPGTNKLAVSATTGICEGRTTKCDDPTKHTNTQRAEKLHSLLTQLNEKGYSPIVYASPKTWNDYYTQEEHNFSHYP
LWVADWRGRSEPELPKDWKDAGKNYTYWNYTSQGEVNGIEGQVPLDQTF

Specific function: This enzyme has both lysozyme (acetylmuramidase) and diacetylmuramidase activities [H]

COG id: COG3757

COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)

Gene ontology:

Cell location: Secreted, extracellular space [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 25 family [H]

Homologues:

Organism=Escherichia coli, GI87082043, Length=206, Percent_Identity=28.6407766990291, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002053
- InterPro:   IPR008270
- InterPro:   IPR017853
- InterPro:   IPR018077
- InterPro:   IPR013781 [H]

Pfam domain/function: PF01183 Glyco_hydro_25 [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 24012; Mature: 23880

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKGIDVSHWNGEIDWLKVAKDEVRFAFAKATEGETFQDTKFGQNFQSMKDNNVQAGAY
CCCCCCCEECCCCCEEEEEHHHHHHHEEEEECCCCCCCCCCHHCCCHHHHCCCCCCCCEE
HVFRMTSTPEGQLNNIVNELKKANFEPGTNKLAVSATTGICEGRTTKCDDPTKHTNTQRA
EEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHH
EKLHSLLTQLNEKGYSPIVYASPKTWNDYYTQEEHNFSHYPLWVADWRGRSEPELPKDWK
HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHH
DAGKNYTYWNYTSQGEVNGIEGQVPLDQTF
HCCCCCEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEKGIDVSHWNGEIDWLKVAKDEVRFAFAKATEGETFQDTKFGQNFQSMKDNNVQAGAY
CCCCCCEECCCCCEEEEEHHHHHHHEEEEECCCCCCCCCCHHCCCHHHHCCCCCCCCEE
HVFRMTSTPEGQLNNIVNELKKANFEPGTNKLAVSATTGICEGRTTKCDDPTKHTNTQRA
EEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHH
EKLHSLLTQLNEKGYSPIVYASPKTWNDYYTQEEHNFSHYPLWVADWRGRSEPELPKDWK
HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHH
DAGKNYTYWNYTSQGEVNGIEGQVPLDQTF
HCCCCCEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2341041 [H]