Click here to switch to the map view.

The map label for this gene is 190570802

Identifier: 190570802

GI number: 190570802

Start: 391005

End: 391427

Strand: Direct

Name: 190570802

Synonym: WPa_0366

Alternate gene names: NA

Gene position: 391005-391427 (Clockwise)

Preceding gene: 190570801

Following gene: 190570804

Centisome position: 26.38

GC content: 33.81

Gene sequence:

>423_bases
ATGGGTTTATCTATACAGAGCACTATTGGTAATACTGTAGACTTTCTGTTGTGTGCTCGTAGAGACAAGTCTGCGGCACT
TGCGTTCTTTCGTAAAGCCTTTAGAGAGAATAACCTTCCTGAGAAAGTAGTAATTGATAAAAGCGGCAGTAATACTGCTG
CTCTTGATGATTTGAATACAGAAATTTCTGAAGATTGTAGAATCATGGTTTTTCAAATAAAATATCTAAATAATATTGTC
GAACAAGATCATAGATTTATCAAAAAACGAATAAAGCCAATGCTTGGTTTTAAGAGCTTCCACTCCGCAAAGATTACCAT
TACCGGCATAGAAAATATTCGTATGATTCAAAAAAGACAAATTATCGGGGCTAATGATAATGTTTCTACTTTTGAGAATT
TTGCTATGCTAATTGCTCTATAA

Upstream 100 bases:

>100_bases
TTACAAAGGTGGGTTATCACCACTGATAGATGAAGCGGTAAGGAAAAGGAAGAAGCAGGTTGGCAGTAGCTGGAGAGACC
TACGTTAAATTAAACGGCAA

Downstream 100 bases:

>100_bases
CTCCCATAATCCCAGTTTAACGATCTTCTTGTACCACAATTTATAGATGCGACAGAACCTTCTATGCTCTCTCTCAATCT
TTGGATTTTAATCCATAGTG

Product: transposase (fragment)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MGLSIQSTIGNTVDFLLCARRDKSAALAFFRKAFRENNLPEKVVIDKSGSNTAALDDLNTEISEDCRIMVFQIKYLNNIV
EQDHRFIKKRIKPMLGFKSFHSAKITITGIENIRMIQKRQIIGANDNVSTFENFAMLIAL

Sequences:

>Translated_140_residues
MGLSIQSTIGNTVDFLLCARRDKSAALAFFRKAFRENNLPEKVVIDKSGSNTAALDDLNTEISEDCRIMVFQIKYLNNIV
EQDHRFIKKRIKPMLGFKSFHSAKITITGIENIRMIQKRQIIGANDNVSTFENFAMLIAL
>Mature_139_residues
GLSIQSTIGNTVDFLLCARRDKSAALAFFRKAFRENNLPEKVVIDKSGSNTAALDDLNTEISEDCRIMVFQIKYLNNIVE
QDHRFIKKRIKPMLGFKSFHSAKITITGIENIRMIQKRQIIGANDNVSTFENFAMLIAL

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 15899; Mature: 15768

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSIQSTIGNTVDFLLCARRDKSAALAFFRKAFRENNLPEKVVIDKSGSNTAALDDLNT
CCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCCCCC
EISEDCRIMVFQIKYLNNIVEQDHRFIKKRIKPMLGFKSFHSAKITITGIENIRMIQKRQ
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHH
IIGANDNVSTFENFAMLIAL
CCCCCCCHHHHHHHEEEEEC
>Mature Secondary Structure 
GLSIQSTIGNTVDFLLCARRDKSAALAFFRKAFRENNLPEKVVIDKSGSNTAALDDLNT
CCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCCCCC
EISEDCRIMVFQIKYLNNIVEQDHRFIKKRIKPMLGFKSFHSAKITITGIENIRMIQKRQ
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHH
IIGANDNVSTFENFAMLIAL
CCCCCCCHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]