Definition Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome.
Accession NC_010981
Length 1,482,455

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The map label for this gene is recO

Identifier: 190570798

GI number: 190570798

Start: 384530

End: 385258

Strand: Reverse

Name: recO

Synonym: WPa_0359

Alternate gene names: 190570798

Gene position: 385258-384530 (Counterclockwise)

Preceding gene: 190570800

Following gene: 190570789

Centisome position: 25.99

GC content: 30.73

Gene sequence:

>729_bases
ATGAGATGGAAAGATGAAGGTGTTATTATAGCTGTTAAAAAATACGGTGATAAAAATTTAATTCTTTCTCTATTTACAAA
AAATCATGGAAAGTGCAGAGGATTAACTAGGTTAACAAACAATAGCAATTATAAGTTTCAAATAAGTAATCTATTACATG
CAGAATGGAGTGCTAAGCTACCTGAAAATCTAGGTTTTTTAAAGTGCGAATTGATTGAATCTCCATTTCATCATTTCTTT
CAAGATAGGTTAAAAAGCATTGCTATTGTTTCTTTCTCGTCTATATTAGAAAAAGTGCTTCCAGAAAGTGAATCCTGCAT
CAAGTTATATGATAATTTTAGACACTTCATCGATGTAATAAAACATAATAGCCAGTTTTGGCAAAGTCATTACCTTAACT
TAGAGCTTCTGCTTCTTACGCAACTTGGATTTAAGTTAGACCTATCAAAATGTGCTGTAACAGGTGTGAAAGAAAATCTA
CAATTTATTTCTCCAAAAACTGGTAGAGCAGTGTCAAAAAAAGTAGGTGACTGTTATGCAGATAAATTACTACCTTTTCC
ACAGATGTTGCATGATGTATACAATAACAACCTACAAAATAGCTACTCATATCAAGAATTCAGACTAGGGTTAAAAATTA
CAGGGTATTTTTTAAATAAATATCTATTTCTGCAGTTAAATGCGAAATTTCCGGAGTTGAGAAATTTTATGCTATCATTT
GAATCTTAG

Upstream 100 bases:

>100_bases
AATATTGCACATAAAGTCAATATATTTCAGTTGACTTAAACTCAAATTTGCTACACTAATTTTATTATCTCTATAATATC
ATATGGTCAATATACTCTGA

Downstream 100 bases:

>100_bases
TTACTACTTATTTGAAAGAACTTCAACCAGTAACCACTCTATTTCTACCACTGTTTTTTGCTTTATATAAATATTTGTCA
GCACGTACTATAAATTTTTT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MRWKDEGVIIAVKKYGDKNLILSLFTKNHGKCRGLTRLTNNSNYKFQISNLLHAEWSAKLPENLGFLKCELIESPFHHFF
QDRLKSIAIVSFSSILEKVLPESESCIKLYDNFRHFIDVIKHNSQFWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENL
QFISPKTGRAVSKKVGDCYADKLLPFPQMLHDVYNNNLQNSYSYQEFRLGLKITGYFLNKYLFLQLNAKFPELRNFMLSF
ES

Sequences:

>Translated_242_residues
MRWKDEGVIIAVKKYGDKNLILSLFTKNHGKCRGLTRLTNNSNYKFQISNLLHAEWSAKLPENLGFLKCELIESPFHHFF
QDRLKSIAIVSFSSILEKVLPESESCIKLYDNFRHFIDVIKHNSQFWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENL
QFISPKTGRAVSKKVGDCYADKLLPFPQMLHDVYNNNLQNSYSYQEFRLGLKITGYFLNKYLFLQLNAKFPELRNFMLSF
ES
>Mature_242_residues
MRWKDEGVIIAVKKYGDKNLILSLFTKNHGKCRGLTRLTNNSNYKFQISNLLHAEWSAKLPENLGFLKCELIESPFHHFF
QDRLKSIAIVSFSSILEKVLPESESCIKLYDNFRHFIDVIKHNSQFWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENL
QFISPKTGRAVSKKVGDCYADKLLPFPQMLHDVYNNNLQNSYSYQEFRLGLKITGYFLNKYLFLQLNAKFPELRNFMLSF
ES

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_WOLPP (B3CPG9)

Other databases:

- EMBL:   AM999887
- RefSeq:   YP_001975156.1
- EnsemblBacteria:   EBWOLT00000000142
- GeneID:   6384386
- GenomeReviews:   AM999887_GR
- KEGG:   wpi:WPa_0359
- GeneTree:   EBGT00050000030909
- HOGENOM:   HBG474229
- OMA:   PERDPHP
- ProtClustDB:   PRK00085
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 28233; Mature: 28233

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWKDEGVIIAVKKYGDKNLILSLFTKNHGKCRGLTRLTNNSNYKFQISNLLHAEWSAKL
CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEECCHHHHHHCCCC
PENLGFLKCELIESPFHHFFQDRLKSIAIVSFSSILEKVLPESESCIKLYDNFRHFIDVI
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KHNSQFWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVGDCYA
HCCHHHHHHHCCCCEEEEEHHCCCEEEHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH
DKLLPFPQMLHDVYNNNLQNSYSYQEFRLGLKITGYFLNKYLFLQLNAKFPELRNFMLSF
HHCCCHHHHHHHHHCCCCCCCCCHHHHEECCEEEEEECCEEEEEEECCCCHHHHHHHHHC
ES
CC
>Mature Secondary Structure
MRWKDEGVIIAVKKYGDKNLILSLFTKNHGKCRGLTRLTNNSNYKFQISNLLHAEWSAKL
CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEECCHHHHHHCCCC
PENLGFLKCELIESPFHHFFQDRLKSIAIVSFSSILEKVLPESESCIKLYDNFRHFIDVI
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KHNSQFWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVGDCYA
HCCHHHHHHHCCCCEEEEEHHCCCEEEHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH
DKLLPFPQMLHDVYNNNLQNSYSYQEFRLGLKITGYFLNKYLFLQLNAKFPELRNFMLSF
HHCCCHHHHHHHHHCCCCCCCCCHHHHEECCEEEEEECCEEEEEEECCCCHHHHHHHHHC
ES
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA