Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is dnaJ [C]
Identifier: 190570787
GI number: 190570787
Start: 366743
End: 367768
Strand: Reverse
Name: dnaJ [C]
Synonym: WPa_0347
Alternate gene names: 190570787
Gene position: 367768-366743 (Counterclockwise)
Preceding gene: 190570788
Following gene: 190570786
Centisome position: 24.81
GC content: 34.41
Gene sequence:
>1026_bases GTGAGTGACACCATTAGTAATGAAGGAAGTATTATAGCACTACTAAAGGAATTTATGCCTGGTTTCAACGTTAACGGCCT CTCTGAGATTGATCACTATAAGATATTAGGGGTGTCAAGAAATGCTACTCTTACAGAGATAAAGGAAGCACGTAATAGAT TAGCGCTTATATTTCACCCAGATAAAATTATTTCCCCTGAGGAAAAACCCATATACAATAAATTATTATGCAAAGCCAAT AATAGACAGGCATTTTCACAATCAGAAGAAAAAGATTGGGCTAAGTTTCAAGAAAAGTTCAATTCTGCAAAAAAAATCAA TATTGCATATGAAGTACTAAGTGATGAAAAGAAAAGGAATGATTACGATAGAAAACTCCAGGTCGATAATAGTGGTCTGA ATAATTTCAAGCGATCTTCTAAAAATACACAATCGACTGATAGAGAAACAGAAAAAAACAAAAAAGATATTAAAGTTCGT TTATTTCATGCATTTCATAATGGAGATTTACAGGAGGCAAAAAATCTAGTAAGGAAAGTGGATGACCTTGATATAACTCT ACCAGAATACCCTATCGGTTCCGCATTGTATTTTTTTGTTCTACGCGCTTGCATGAGTGAGGATTGGTTCAAATTTTATC AAGATGTTTTATCGAAGCAAGGCAGTAACGTTGACCTTAACATTGAAGTTCATCCAAAGTTAGGAACAGCTTTAAGTGCT GCATGCAGCAAAGAAAGACCAAACTCAAAAAAGAGAGATGTTGTAAAATTACTATTGAGCTATGGAGTTGATGTTAATAA AGTTAGTCAATCGCGAGAGAGAGCACCAATCCTTTACGCTCTAAAAAACAATGACCACGACTTAGCATCCTTACTTTTTA AACATGGAGCAAAGATTGATGTTACTCCTGAATTGGAAAGTTCAATTATTCTTTATAGCAATCTGAGAGGCTGCAGTAAA TATACAAAGAAACAATGGAAGTTTTGTTGCAACATACTTCTCCTAAGCAAAACACTGAGATGCTAA
Upstream 100 bases:
>100_bases TTTTATGCTTTTAAAAAAGTAAACAAATAAATTTTTGTTGATGCTAGAAAGCATAGTGCTTTGTTCAATTAGAATAGGCT TTATGTTGACAAGAACTTGA
Downstream 100 bases:
>100_bases AGCGTTTTGCAAATAATCGAACCTTAGAAAATCAAGATATTGAAATTGTAAAGTTACTTTTAAGTAAAGGGGCTAACCCT TCAATCATTCAGGGCAATTC
Product: ankyrin repeat domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSDTISNEGSIIALLKEFMPGFNVNGLSEIDHYKILGVSRNATLTEIKEARNRLALIFHPDKIISPEEKPIYNKLLCKAN NRQAFSQSEEKDWAKFQEKFNSAKKINIAYEVLSDEKKRNDYDRKLQVDNSGLNNFKRSSKNTQSTDRETEKNKKDIKVR LFHAFHNGDLQEAKNLVRKVDDLDITLPEYPIGSALYFFVLRACMSEDWFKFYQDVLSKQGSNVDLNIEVHPKLGTALSA ACSKERPNSKKRDVVKLLLSYGVDVNKVSQSRERAPILYALKNNDHDLASLLFKHGAKIDVTPELESSIILYSNLRGCSK YTKKQWKFCCNILLLSKTLRC
Sequences:
>Translated_341_residues MSDTISNEGSIIALLKEFMPGFNVNGLSEIDHYKILGVSRNATLTEIKEARNRLALIFHPDKIISPEEKPIYNKLLCKAN NRQAFSQSEEKDWAKFQEKFNSAKKINIAYEVLSDEKKRNDYDRKLQVDNSGLNNFKRSSKNTQSTDRETEKNKKDIKVR LFHAFHNGDLQEAKNLVRKVDDLDITLPEYPIGSALYFFVLRACMSEDWFKFYQDVLSKQGSNVDLNIEVHPKLGTALSA ACSKERPNSKKRDVVKLLLSYGVDVNKVSQSRERAPILYALKNNDHDLASLLFKHGAKIDVTPELESSIILYSNLRGCSK YTKKQWKFCCNILLLSKTLRC >Mature_340_residues SDTISNEGSIIALLKEFMPGFNVNGLSEIDHYKILGVSRNATLTEIKEARNRLALIFHPDKIISPEEKPIYNKLLCKANN RQAFSQSEEKDWAKFQEKFNSAKKINIAYEVLSDEKKRNDYDRKLQVDNSGLNNFKRSSKNTQSTDRETEKNKKDIKVRL FHAFHNGDLQEAKNLVRKVDDLDITLPEYPIGSALYFFVLRACMSEDWFKFYQDVLSKQGSNVDLNIEVHPKLGTALSAA CSKERPNSKKRDVVKLLLSYGVDVNKVSQSRERAPILYALKNNDHDLASLLFKHGAKIDVTPELESSIILYSNLRGCSKY TKKQWKFCCNILLLSKTLRC
Specific function: Interacts With Dnak To Disassemble A Protein Complex At The Phage Lambda Origin Of Replication. Stimulates, Jointly With Grpe, The Atpase Activity Of Dnak. [C]
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39093; Mature: 38962
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION ; PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTISNEGSIIALLKEFMPGFNVNGLSEIDHYKILGVSRNATLTEIKEARNRLALIFHP CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCEEEEECC DKIISPEEKPIYNKLLCKANNRQAFSQSEEKDWAKFQEKFNSAKKINIAYEVLSDEKKRN CCCCCCCCCCHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEHHHHHHHCHHHCC DYDRKLQVDNSGLNNFKRSSKNTQSTDRETEKNKKDIKVRLFHAFHNGDLQEAKNLVRKV CCCCEEEECCCCCHHHHHCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHH DDLDITLPEYPIGSALYFFVLRACMSEDWFKFYQDVLSKQGSNVDLNIEVHPKLGTALSA CCCEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHH ACSKERPNSKKRDVVKLLLSYGVDVNKVSQSRERAPILYALKNNDHDLASLLFKHGAKID HHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEE VTPELESSIILYSNLRGCSKYTKKQWKFCCNILLLSKTLRC ECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDTISNEGSIIALLKEFMPGFNVNGLSEIDHYKILGVSRNATLTEIKEARNRLALIFHP CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCEEEEECC DKIISPEEKPIYNKLLCKANNRQAFSQSEEKDWAKFQEKFNSAKKINIAYEVLSDEKKRN CCCCCCCCCCHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEHHHHHHHCHHHCC DYDRKLQVDNSGLNNFKRSSKNTQSTDRETEKNKKDIKVRLFHAFHNGDLQEAKNLVRKV CCCCEEEECCCCCHHHHHCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHH DDLDITLPEYPIGSALYFFVLRACMSEDWFKFYQDVLSKQGSNVDLNIEVHPKLGTALSA CCCEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHH ACSKERPNSKKRDVVKLLLSYGVDVNKVSQSRERAPILYALKNNDHDLASLLFKHGAKID HHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEE VTPELESSIILYSNLRGCSKYTKKQWKFCCNILLLSKTLRC ECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA