Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570782
Identifier: 190570782
GI number: 190570782
Start: 358447
End: 358920
Strand: Direct
Name: 190570782
Synonym: WPa_0340
Alternate gene names: NA
Gene position: 358447-358920 (Clockwise)
Preceding gene: 190570781
Following gene: 190570783
Centisome position: 24.18
GC content: 36.71
Gene sequence:
>474_bases ATGTTAAAGCTTGGCAAATTTAATAAATCAGCAAAAGAATTATTAGAGAACTCATATAAAAATATTTATGCAAGAGACGA GAATGGAAGAACAGCTCTGCATTATGCAATAAACGCAAAAACAGTGAGGGTATTAGTTGAAAAAGGAGTGAATGTAAATG CAGCAGACGTAGGAGGATATACAGCACTGCACCTAGCGGTAACGGAGAAACGTCTAGAAATCGTGAGAGAATTGATAAAA TCAGGAGCAGAAGTAAATGCTGAGGAATATGGAAATAAATGCATACCTCTACACCTTGCGTGCATGGTAGGTGAAAAAGA AATAGTGGAGGAGCTAGTAAAAGCAGGAGCAGAAATAGAGCAAGCAGATAAATTTGGAATGACAGGGATGGATTATGCGA AAAATAGTAAAGAGATAACCGAGGTATTAAAGAAAGAAACAGACAGGATTGAAAAGCTATTTATGAGAGGCTAA
Upstream 100 bases:
>100_bases CAAGCAAGATAATGAGCCAAGTGAACGAAATGATAGATGAGGTAGCGAAAAGGAAGGTTTAAAAGAGGGATTTAAATTTA AAGAAAAGGTGAGGTGGATT
Downstream 100 bases:
>100_bases AAATATGGAGGAAGAAACAGAAAAGAAAGTAATGAATTTAGAGAAAAAAGCGTTGGCAGAACTGAGAAAAATATGGAAGA AGGTATATGAGGAAGAAGCA
Product: Ankyrin repeat domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MLKLGKFNKSAKELLENSYKNIYARDENGRTALHYAINAKTVRVLVEKGVNVNAADVGGYTALHLAVTEKRLEIVRELIK SGAEVNAEEYGNKCIPLHLACMVGEKEIVEELVKAGAEIEQADKFGMTGMDYAKNSKEITEVLKKETDRIEKLFMRG
Sequences:
>Translated_157_residues MLKLGKFNKSAKELLENSYKNIYARDENGRTALHYAINAKTVRVLVEKGVNVNAADVGGYTALHLAVTEKRLEIVRELIK SGAEVNAEEYGNKCIPLHLACMVGEKEIVEELVKAGAEIEQADKFGMTGMDYAKNSKEITEVLKKETDRIEKLFMRG >Mature_157_residues MLKLGKFNKSAKELLENSYKNIYARDENGRTALHYAINAKTVRVLVEKGVNVNAADVGGYTALHLAVTEKRLEIVRELIK SGAEVNAEEYGNKCIPLHLACMVGEKEIVEELVKAGAEIEQADKFGMTGMDYAKNSKEITEVLKKETDRIEKLFMRG
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 18 ANK repeats [H]
Homologues:
Organism=Homo sapiens, GI62420875, Length=141, Percent_Identity=31.2056737588652, Blast_Score=81, Evalue=4e-16, Organism=Homo sapiens, GI62420873, Length=141, Percent_Identity=31.2056737588652, Blast_Score=81, Evalue=4e-16, Organism=Homo sapiens, GI4758606, Length=141, Percent_Identity=31.2056737588652, Blast_Score=81, Evalue=4e-16, Organism=Homo sapiens, GI52486251, Length=127, Percent_Identity=35.4330708661417, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI52486194, Length=127, Percent_Identity=35.4330708661417, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI28605137, Length=111, Percent_Identity=39.6396396396396, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI4506217, Length=111, Percent_Identity=39.6396396396396, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI304361760, Length=128, Percent_Identity=34.375, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI304361757, Length=128, Percent_Identity=34.375, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI68131557, Length=128, Percent_Identity=34.375, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI13129098, Length=120, Percent_Identity=41.6666666666667, Blast_Score=70, Evalue=5e-13, Organism=Homo sapiens, GI24233530, Length=120, Percent_Identity=35, Blast_Score=70, Evalue=9e-13, Organism=Homo sapiens, GI56550047, Length=112, Percent_Identity=40.1785714285714, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI59850762, Length=112, Percent_Identity=40.1785714285714, Blast_Score=69, Evalue=1e-12, Organism=Homo sapiens, GI157743284, Length=127, Percent_Identity=32.2834645669291, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI56676397, Length=126, Percent_Identity=31.7460317460317, Blast_Score=67, Evalue=9e-12, Organism=Homo sapiens, GI224809472, Length=112, Percent_Identity=35.7142857142857, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI224809470, Length=112, Percent_Identity=35.7142857142857, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI224809468, Length=112, Percent_Identity=35.7142857142857, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI224809476, Length=112, Percent_Identity=35.7142857142857, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI256574792, Length=144, Percent_Identity=34.0277777777778, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI224809474, Length=112, Percent_Identity=35.7142857142857, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI224809478, Length=112, Percent_Identity=35.7142857142857, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI157739945, Length=139, Percent_Identity=33.0935251798561, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI89363047, Length=121, Percent_Identity=33.8842975206612, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI188595682, Length=116, Percent_Identity=34.4827586206897, Blast_Score=64, Evalue=5e-11, Organism=Homo sapiens, GI52426737, Length=116, Percent_Identity=34.4827586206897, Blast_Score=64, Evalue=6e-11, Organism=Homo sapiens, GI32967601, Length=119, Percent_Identity=34.453781512605, Blast_Score=64, Evalue=6e-11, Organism=Homo sapiens, GI52426735, Length=116, Percent_Identity=34.4827586206897, Blast_Score=64, Evalue=8e-11, Organism=Homo sapiens, GI156142199, Length=148, Percent_Identity=33.1081081081081, Blast_Score=64, Evalue=8e-11, Organism=Homo sapiens, GI156142197, Length=148, Percent_Identity=33.1081081081081, Blast_Score=64, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17554382, Length=125, Percent_Identity=32.8, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24667933, Length=131, Percent_Identity=38.1679389312977, Blast_Score=80, Evalue=5e-16, Organism=Drosophila melanogaster, GI281359521, Length=137, Percent_Identity=35.036496350365, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI281359519, Length=137, Percent_Identity=35.036496350365, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI28558752, Length=137, Percent_Identity=35.036496350365, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI28558750, Length=137, Percent_Identity=35.036496350365, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI28558756, Length=137, Percent_Identity=35.036496350365, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI28558754, Length=137, Percent_Identity=35.036496350365, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI21356741, Length=141, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24654064, Length=134, Percent_Identity=32.8358208955224, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI161082089, Length=144, Percent_Identity=30.5555555555556, Blast_Score=63, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 - InterPro: IPR007685 [H]
Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]
EC number: NA
Molecular weight: Translated: 17519; Mature: 17519
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLGKFNKSAKELLENSYKNIYARDENGRTALHYAINAKTVRVLVEKGVNVNAADVGGY CCCCCCCCHHHHHHHHHHHHHEEEECCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCCCE TALHLAVTEKRLEIVRELIKSGAEVNAEEYGNKCIPLHLACMVGEKEIVEELVKAGAEIE EHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCCHH QADKFGMTGMDYAKNSKEITEVLKKETDRIEKLFMRG HHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKLGKFNKSAKELLENSYKNIYARDENGRTALHYAINAKTVRVLVEKGVNVNAADVGGY CCCCCCCCHHHHHHHHHHHHHEEEECCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCCCE TALHLAVTEKRLEIVRELIKSGAEVNAEEYGNKCIPLHLACMVGEKEIVEELVKAGAEIE EHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCCHH QADKFGMTGMDYAKNSKEITEVLKKETDRIEKLFMRG HHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA