Definition Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome.
Accession NC_010981
Length 1,482,455

Click here to switch to the map view.

The map label for this gene is yahD [C]

Identifier: 190570781

GI number: 190570781

Start: 357596

End: 358408

Strand: Direct

Name: yahD [C]

Synonym: WPa_0339

Alternate gene names: 190570781

Gene position: 357596-358408 (Clockwise)

Preceding gene: 190570780

Following gene: 190570782

Centisome position: 24.12

GC content: 37.88

Gene sequence:

>813_bases
GTGAAAACTAATATTGATGAGCCGTGTGCGGGAAATCTGCAAGCACGGTTCTTTAGGGGGAGTTGTAGTAATAAAACTCA
AACGAGAGGAGTAAAGCTACAGCTTCTACCAAACAGTTTTAGCAAGAGTAAGTTTTTTAAAGAAGTATCAAGTAAGGATA
TTAATAAAAGAAATGAAGAAGGAGAGACGATATTACACCAAGCAGTAGAAATCTCCAATTACAAAACAGTGAGGTTCTTA
ATAAAGAAAGGAGCAGAGGTAAATGCAAGAGACAAAAATGGTTATACACCTCTGCACTGTGCAGTATTCGCAAAAAGTTT
AGAAAATGTAAAAGTGCTGCTAAGAGAAGGAGCGGAAGTAAATGCTACTCAATATGTCACTGGATGTACGCCACTCCACT
CTGCGTGCAAAATAGGAGGAGCAGGAGTTGAAATAATAAAAGAGCTAGTGAAGGCCGGAGCTGAGGTTAATCAACTGAAT
AAATATGGTGCAACACCAATGTATTACATTTGGGAAAGTGAAAAGTATTGTTCATGGAATAGAGAAGAGAATGAAAAGGC
GAGTAAATTTCTGAGAGAACAAGGAGGAATAACAAGAAGTAGAGAACTGACATGCTATGGAATAGAGAGGCTAGTGGGAG
AAATAGCAGACATGTTGAATGGGAGCTACATGCCGGAGCTAAAAATAATAGAGATAGGAGAAATAAGGAAGAGAGACAAA
TCGCTAATAAAGGAAGAATGTAAAAATTTAGCAAGCAAGATAATGAGCCAAGTGAACGAAATGATAGATGAGGTAGCGAA
AAGGAAGGTTTAA

Upstream 100 bases:

>100_bases
AAAAGAGTATGACCTGGGAACAGTTTGTACACTACGTAGAAGTAAATCCATTACCAAAGCCAAAAATACATTTTTCTTTA
TATGCATAAGAGGGACGACT

Downstream 100 bases:

>100_bases
AAGAGGGATTTAAATTTAAAGAAAAGGTGAGGTGGATTATGTTAAAGCTTGGCAAATTTAATAAATCAGCAAAAGAATTA
TTAGAGAACTCATATAAAAA

Product: ankyrin repeat domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKTNIDEPCAGNLQARFFRGSCSNKTQTRGVKLQLLPNSFSKSKFFKEVSSKDINKRNEEGETILHQAVEISNYKTVRFL
IKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLLREGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLN
KYGATPMYYIWESEKYCSWNREENEKASKFLREQGGITRSRELTCYGIERLVGEIADMLNGSYMPELKIIEIGEIRKRDK
SLIKEECKNLASKIMSQVNEMIDEVAKRKV

Sequences:

>Translated_270_residues
MKTNIDEPCAGNLQARFFRGSCSNKTQTRGVKLQLLPNSFSKSKFFKEVSSKDINKRNEEGETILHQAVEISNYKTVRFL
IKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLLREGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLN
KYGATPMYYIWESEKYCSWNREENEKASKFLREQGGITRSRELTCYGIERLVGEIADMLNGSYMPELKIIEIGEIRKRDK
SLIKEECKNLASKIMSQVNEMIDEVAKRKV
>Mature_270_residues
MKTNIDEPCAGNLQARFFRGSCSNKTQTRGVKLQLLPNSFSKSKFFKEVSSKDINKRNEEGETILHQAVEISNYKTVRFL
IKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLLREGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLN
KYGATPMYYIWESEKYCSWNREENEKASKFLREQGGITRSRELTCYGIERLVGEIADMLNGSYMPELKIIEIGEIRKRDK
SLIKEECKNLASKIMSQVNEMIDEVAKRKV

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI134948558, Length=114, Percent_Identity=42.1052631578947, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI134948605, Length=114, Percent_Identity=42.1052631578947, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI157266328, Length=114, Percent_Identity=40.3508771929825, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI24233530, Length=117, Percent_Identity=40.1709401709402, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI304361760, Length=117, Percent_Identity=37.6068376068376, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI304361757, Length=117, Percent_Identity=37.6068376068376, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI68131557, Length=117, Percent_Identity=37.6068376068376, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI157743284, Length=104, Percent_Identity=41.3461538461538, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI56676397, Length=131, Percent_Identity=39.6946564885496, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI164664508, Length=116, Percent_Identity=39.6551724137931, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI256574792, Length=157, Percent_Identity=33.7579617834395, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI89363047, Length=116, Percent_Identity=39.6551724137931, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI87239981, Length=127, Percent_Identity=37.7952755905512, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI187608777, Length=115, Percent_Identity=38.2608695652174, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI28605137, Length=113, Percent_Identity=38.0530973451327, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI4506217, Length=113, Percent_Identity=38.0530973451327, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI41350198, Length=106, Percent_Identity=39.622641509434, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI52426737, Length=115, Percent_Identity=35.6521739130435, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI188595682, Length=115, Percent_Identity=35.6521739130435, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI70780355, Length=150, Percent_Identity=32.6666666666667, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI70780357, Length=150, Percent_Identity=32.6666666666667, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI215598574, Length=150, Percent_Identity=32.6666666666667, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI70780359, Length=150, Percent_Identity=32.6666666666667, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI70780353, Length=150, Percent_Identity=32.6666666666667, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI18252778, Length=116, Percent_Identity=32.7586206896552, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI32967601, Length=114, Percent_Identity=35.9649122807018, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI16975496, Length=116, Percent_Identity=37.9310344827586, Blast_Score=65, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17561074, Length=80, Percent_Identity=42.5, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115533713, Length=164, Percent_Identity=32.9268292682927, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24654624, Length=121, Percent_Identity=37.1900826446281, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI161082085, Length=144, Percent_Identity=34.0277777777778, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI161082089, Length=144, Percent_Identity=34.0277777777778, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281359521, Length=118, Percent_Identity=36.4406779661017, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281359519, Length=118, Percent_Identity=36.4406779661017, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28558752, Length=118, Percent_Identity=36.4406779661017, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28558750, Length=118, Percent_Identity=36.4406779661017, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28558756, Length=118, Percent_Identity=36.4406779661017, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28558754, Length=118, Percent_Identity=36.4406779661017, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45553307, Length=111, Percent_Identity=36.9369369369369, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24644921, Length=111, Percent_Identity=36.9369369369369, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24644919, Length=111, Percent_Identity=36.9369369369369, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581260, Length=115, Percent_Identity=37.3913043478261, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24581258, Length=115, Percent_Identity=37.3913043478261, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21356741, Length=126, Percent_Identity=37.3015873015873, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI161082099, Length=144, Percent_Identity=34.0277777777778, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161077991, Length=121, Percent_Identity=38.8429752066116, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161077993, Length=121, Percent_Identity=38.8429752066116, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161082110, Length=144, Percent_Identity=34.0277777777778, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45552223, Length=112, Percent_Identity=36.6071428571429, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161082096, Length=144, Percent_Identity=34.0277777777778, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17998549, Length=112, Percent_Identity=36.6071428571429, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221472807, Length=112, Percent_Identity=36.6071428571429, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161082106, Length=144, Percent_Identity=34.0277777777778, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161082081, Length=144, Percent_Identity=34.0277777777778, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24643883, Length=121, Percent_Identity=38.8429752066116, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 30459; Mature: 30459

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNIDEPCAGNLQARFFRGSCSNKTQTRGVKLQLLPNSFSKSKFFKEVSSKDINKRNEE
CCCCCCCCCCCCCCEEEEECCCCCCCHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCH
GETILHQAVEISNYKTVRFLIKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLLREGAEV
HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
NATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLNKYGATPMYYIWESEKYCSWN
CCHHEEECCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCC
REENEKASKFLREQGGITRSRELTCYGIERLVGEIADMLNGSYMPELKIIEIGEIRKRDK
CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHH
SLIKEECKNLASKIMSQVNEMIDEVAKRKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTNIDEPCAGNLQARFFRGSCSNKTQTRGVKLQLLPNSFSKSKFFKEVSSKDINKRNEE
CCCCCCCCCCCCCCEEEEECCCCCCCHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCH
GETILHQAVEISNYKTVRFLIKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLLREGAEV
HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
NATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLNKYGATPMYYIWESEKYCSWN
CCHHEEECCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCC
REENEKASKFLREQGGITRSRELTCYGIERLVGEIADMLNGSYMPELKIIEIGEIRKRDK
CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHH
SLIKEECKNLASKIMSQVNEMIDEVAKRKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA