Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is yahD [C]
Identifier: 190570781
GI number: 190570781
Start: 357596
End: 358408
Strand: Direct
Name: yahD [C]
Synonym: WPa_0339
Alternate gene names: 190570781
Gene position: 357596-358408 (Clockwise)
Preceding gene: 190570780
Following gene: 190570782
Centisome position: 24.12
GC content: 37.88
Gene sequence:
>813_bases GTGAAAACTAATATTGATGAGCCGTGTGCGGGAAATCTGCAAGCACGGTTCTTTAGGGGGAGTTGTAGTAATAAAACTCA AACGAGAGGAGTAAAGCTACAGCTTCTACCAAACAGTTTTAGCAAGAGTAAGTTTTTTAAAGAAGTATCAAGTAAGGATA TTAATAAAAGAAATGAAGAAGGAGAGACGATATTACACCAAGCAGTAGAAATCTCCAATTACAAAACAGTGAGGTTCTTA ATAAAGAAAGGAGCAGAGGTAAATGCAAGAGACAAAAATGGTTATACACCTCTGCACTGTGCAGTATTCGCAAAAAGTTT AGAAAATGTAAAAGTGCTGCTAAGAGAAGGAGCGGAAGTAAATGCTACTCAATATGTCACTGGATGTACGCCACTCCACT CTGCGTGCAAAATAGGAGGAGCAGGAGTTGAAATAATAAAAGAGCTAGTGAAGGCCGGAGCTGAGGTTAATCAACTGAAT AAATATGGTGCAACACCAATGTATTACATTTGGGAAAGTGAAAAGTATTGTTCATGGAATAGAGAAGAGAATGAAAAGGC GAGTAAATTTCTGAGAGAACAAGGAGGAATAACAAGAAGTAGAGAACTGACATGCTATGGAATAGAGAGGCTAGTGGGAG AAATAGCAGACATGTTGAATGGGAGCTACATGCCGGAGCTAAAAATAATAGAGATAGGAGAAATAAGGAAGAGAGACAAA TCGCTAATAAAGGAAGAATGTAAAAATTTAGCAAGCAAGATAATGAGCCAAGTGAACGAAATGATAGATGAGGTAGCGAA AAGGAAGGTTTAA
Upstream 100 bases:
>100_bases AAAAGAGTATGACCTGGGAACAGTTTGTACACTACGTAGAAGTAAATCCATTACCAAAGCCAAAAATACATTTTTCTTTA TATGCATAAGAGGGACGACT
Downstream 100 bases:
>100_bases AAGAGGGATTTAAATTTAAAGAAAAGGTGAGGTGGATTATGTTAAAGCTTGGCAAATTTAATAAATCAGCAAAAGAATTA TTAGAGAACTCATATAAAAA
Product: ankyrin repeat domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MKTNIDEPCAGNLQARFFRGSCSNKTQTRGVKLQLLPNSFSKSKFFKEVSSKDINKRNEEGETILHQAVEISNYKTVRFL IKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLLREGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLN KYGATPMYYIWESEKYCSWNREENEKASKFLREQGGITRSRELTCYGIERLVGEIADMLNGSYMPELKIIEIGEIRKRDK SLIKEECKNLASKIMSQVNEMIDEVAKRKV
Sequences:
>Translated_270_residues MKTNIDEPCAGNLQARFFRGSCSNKTQTRGVKLQLLPNSFSKSKFFKEVSSKDINKRNEEGETILHQAVEISNYKTVRFL IKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLLREGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLN KYGATPMYYIWESEKYCSWNREENEKASKFLREQGGITRSRELTCYGIERLVGEIADMLNGSYMPELKIIEIGEIRKRDK SLIKEECKNLASKIMSQVNEMIDEVAKRKV >Mature_270_residues MKTNIDEPCAGNLQARFFRGSCSNKTQTRGVKLQLLPNSFSKSKFFKEVSSKDINKRNEEGETILHQAVEISNYKTVRFL IKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLLREGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLN KYGATPMYYIWESEKYCSWNREENEKASKFLREQGGITRSRELTCYGIERLVGEIADMLNGSYMPELKIIEIGEIRKRDK SLIKEECKNLASKIMSQVNEMIDEVAKRKV
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 18 ANK repeats [H]
Homologues:
Organism=Homo sapiens, GI134948558, Length=114, Percent_Identity=42.1052631578947, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI134948605, Length=114, Percent_Identity=42.1052631578947, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI157266328, Length=114, Percent_Identity=40.3508771929825, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI24233530, Length=117, Percent_Identity=40.1709401709402, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI304361760, Length=117, Percent_Identity=37.6068376068376, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI304361757, Length=117, Percent_Identity=37.6068376068376, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI68131557, Length=117, Percent_Identity=37.6068376068376, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI157743284, Length=104, Percent_Identity=41.3461538461538, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI56676397, Length=131, Percent_Identity=39.6946564885496, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI164664508, Length=116, Percent_Identity=39.6551724137931, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI256574792, Length=157, Percent_Identity=33.7579617834395, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI89363047, Length=116, Percent_Identity=39.6551724137931, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI87239981, Length=127, Percent_Identity=37.7952755905512, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI187608777, Length=115, Percent_Identity=38.2608695652174, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI28605137, Length=113, Percent_Identity=38.0530973451327, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI4506217, Length=113, Percent_Identity=38.0530973451327, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI41350198, Length=106, Percent_Identity=39.622641509434, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI52426737, Length=115, Percent_Identity=35.6521739130435, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI188595682, Length=115, Percent_Identity=35.6521739130435, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI70780355, Length=150, Percent_Identity=32.6666666666667, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI70780357, Length=150, Percent_Identity=32.6666666666667, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI215598574, Length=150, Percent_Identity=32.6666666666667, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI70780359, Length=150, Percent_Identity=32.6666666666667, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI70780353, Length=150, Percent_Identity=32.6666666666667, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI18252778, Length=116, Percent_Identity=32.7586206896552, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI32967601, Length=114, Percent_Identity=35.9649122807018, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI16975496, Length=116, Percent_Identity=37.9310344827586, Blast_Score=65, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17561074, Length=80, Percent_Identity=42.5, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115533713, Length=164, Percent_Identity=32.9268292682927, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24654624, Length=121, Percent_Identity=37.1900826446281, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI161082085, Length=144, Percent_Identity=34.0277777777778, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI161082089, Length=144, Percent_Identity=34.0277777777778, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281359521, Length=118, Percent_Identity=36.4406779661017, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI281359519, Length=118, Percent_Identity=36.4406779661017, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28558752, Length=118, Percent_Identity=36.4406779661017, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28558750, Length=118, Percent_Identity=36.4406779661017, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28558756, Length=118, Percent_Identity=36.4406779661017, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28558754, Length=118, Percent_Identity=36.4406779661017, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45553307, Length=111, Percent_Identity=36.9369369369369, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24644921, Length=111, Percent_Identity=36.9369369369369, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24644919, Length=111, Percent_Identity=36.9369369369369, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581260, Length=115, Percent_Identity=37.3913043478261, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24581258, Length=115, Percent_Identity=37.3913043478261, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI21356741, Length=126, Percent_Identity=37.3015873015873, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI161082099, Length=144, Percent_Identity=34.0277777777778, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI161077991, Length=121, Percent_Identity=38.8429752066116, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI161077993, Length=121, Percent_Identity=38.8429752066116, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI161082110, Length=144, Percent_Identity=34.0277777777778, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552223, Length=112, Percent_Identity=36.6071428571429, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI161082096, Length=144, Percent_Identity=34.0277777777778, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI17998549, Length=112, Percent_Identity=36.6071428571429, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI221472807, Length=112, Percent_Identity=36.6071428571429, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI161082106, Length=144, Percent_Identity=34.0277777777778, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI161082081, Length=144, Percent_Identity=34.0277777777778, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24643883, Length=121, Percent_Identity=38.8429752066116, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 - InterPro: IPR007685 [H]
Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]
EC number: NA
Molecular weight: Translated: 30459; Mature: 30459
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNIDEPCAGNLQARFFRGSCSNKTQTRGVKLQLLPNSFSKSKFFKEVSSKDINKRNEE CCCCCCCCCCCCCCEEEEECCCCCCCHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCH GETILHQAVEISNYKTVRFLIKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLLREGAEV HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC NATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLNKYGATPMYYIWESEKYCSWN CCHHEEECCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCC REENEKASKFLREQGGITRSRELTCYGIERLVGEIADMLNGSYMPELKIIEIGEIRKRDK CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHH SLIKEECKNLASKIMSQVNEMIDEVAKRKV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTNIDEPCAGNLQARFFRGSCSNKTQTRGVKLQLLPNSFSKSKFFKEVSSKDINKRNEE CCCCCCCCCCCCCCEEEEECCCCCCCHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCH GETILHQAVEISNYKTVRFLIKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLLREGAEV HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC NATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLNKYGATPMYYIWESEKYCSWN CCHHEEECCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCC REENEKASKFLREQGGITRSRELTCYGIERLVGEIADMLNGSYMPELKIIEIGEIRKRDK CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHH SLIKEECKNLASKIMSQVNEMIDEVAKRKV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA