Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570765
Identifier: 190570765
GI number: 190570765
Start: 346157
End: 347029
Strand: Direct
Name: 190570765
Synonym: WPa_0323
Alternate gene names: NA
Gene position: 346157-347029 (Clockwise)
Preceding gene: 190570763
Following gene: 190570766
Centisome position: 23.35
GC content: 40.09
Gene sequence:
>873_bases TTACTGAAAGTTTGGATAAATACTACGCTTGGAGAAACTTGGGTAGATAAAGGAGAAGTACCTGATTGGAAGCAATTATT TAACAGGAGAGAATTTTTTCCCGTAGGCACAGTACCAAAAGGTGAAGTGGTTCTCACAGCAGGAGTAGATGTCCAAAAAG ATCGGTTAGAAGTAGAAGTTGTAGCATGGGGAAAAAGCCGTGAAAGTTGGTCAATAGACTACCGAGTATTTGAAGGAGAT ACAGGAGGTAGGGAAGTATGGGGAAAACTCTCTGAGCTTTTAAATCATCATTTTATTGGTGAAAATGGGCTTGAATATAT GATAAGCATGATGGCGGTTGATGCAGGGTATGCAACGCAGGAAGTATACAACTGGGTAAGAGGTCATCAGGGCTCTGGAA GAGTAATGGCAGTCAAAGGTGTAAATAAAGCTCTAGTGCCACTTAGCAGCCCAAGTAGAGTTGATATAACAGTTGGTGGT CAAAAGCTGAAAAGAGGAATAAAGCTCTGGCCAGTAGGAGTATCGATATTAAAGTCAGAACTTTTTCAATTACTTAATGT TTTAAAGGACGGTGAAGAAGCTCCAGCAGGATACTGTCATTTTCCCGAGTATGCACCTGAATATTTTAAGCAGCTAACGG CAGAGCAATTAGTCAGCAAAGTGGTAAAAGGATACACCAAACAAGAGTGGCAAAAGGTAAGAGAAAGAAATGAAGTGCTA GATTGCCGAATTTATGCGAGAGCAGCATCTATTGCACTTGGAATTGATCGTTGGCCAGAGAGTAAATGGAATAGTTTGAG TGGAAAAATGGAAAGCAAAAAGCCTAAAAAAGTAATACAGAGTAAGTGGCTTGGTAATCAAAATGTACAGTGA
Upstream 100 bases:
>100_bases NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNN
Downstream 100 bases:
>100_bases AGAATATTTAACTCAAGTTGAGAAAGCAATTCAAAAACTGCAAAGCGGAGAAAGAGTTGTCTCAATTGCATATGGTGACC ATGTTGTGAGGTACGGGGAA
Product: Phage terminase large subunit GpA (fragment)
Products: NA
Alternate protein names: Phage Terminase GpA; Terminase GpA; Terminase Large Subunit; Bacteriophage Tail Assembly Protein; Prophage LambdaW1 Terminase Large Subunit; Bacteriophage Tail Assembly Protein-Like Protein; Phage-Related Terminase Large Subunit; Prophage; DNA Packaging R; Bacteriophage Terminase Large Subunit; Large Subunit Of DNA Packaging Dimer; Phage Terminase GpA Family Protein; Terminase Gpa; DNA Packaging Protein; DNA Packaging Protein Of Prophage
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues LLKVWINTTLGETWVDKGEVPDWKQLFNRREFFPVGTVPKGEVVLTAGVDVQKDRLEVEVVAWGKSRESWSIDYRVFEGD TGGREVWGKLSELLNHHFIGENGLEYMISMMAVDAGYATQEVYNWVRGHQGSGRVMAVKGVNKALVPLSSPSRVDITVGG QKLKRGIKLWPVGVSILKSELFQLLNVLKDGEEAPAGYCHFPEYAPEYFKQLTAEQLVSKVVKGYTKQEWQKVRERNEVL DCRIYARAASIALGIDRWPESKWNSLSGKMESKKPKKVIQSKWLGNQNVQ
Sequences:
>Translated_290_residues LLKVWINTTLGETWVDKGEVPDWKQLFNRREFFPVGTVPKGEVVLTAGVDVQKDRLEVEVVAWGKSRESWSIDYRVFEGD TGGREVWGKLSELLNHHFIGENGLEYMISMMAVDAGYATQEVYNWVRGHQGSGRVMAVKGVNKALVPLSSPSRVDITVGG QKLKRGIKLWPVGVSILKSELFQLLNVLKDGEEAPAGYCHFPEYAPEYFKQLTAEQLVSKVVKGYTKQEWQKVRERNEVL DCRIYARAASIALGIDRWPESKWNSLSGKMESKKPKKVIQSKWLGNQNVQ >Mature_290_residues LLKVWINTTLGETWVDKGEVPDWKQLFNRREFFPVGTVPKGEVVLTAGVDVQKDRLEVEVVAWGKSRESWSIDYRVFEGD TGGREVWGKLSELLNHHFIGENGLEYMISMMAVDAGYATQEVYNWVRGHQGSGRVMAVKGVNKALVPLSSPSRVDITVGG QKLKRGIKLWPVGVSILKSELFQLLNVLKDGEEAPAGYCHFPEYAPEYFKQLTAEQLVSKVVKGYTKQEWQKVRERNEVL DCRIYARAASIALGIDRWPESKWNSLSGKMESKKPKKVIQSKWLGNQNVQ
Specific function: Unknown
COG id: COG5525
COG function: function code R; Bacteriophage tail assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32869; Mature: 32869
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure LLKVWINTTLGETWVDKGEVPDWKQLFNRREFFPVGTVPKGEVVLTAGVDVQKDRLEVEV CEEEEEECCCCCHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEE VAWGKSRESWSIDYRVFEGDTGGREVWGKLSELLNHHFIGENGLEYMISMMAVDAGYATQ EEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHH EVYNWVRGHQGSGRVMAVKGVNKALVPLSSPSRVDITVGGQKLKRGIKLWPVGVSILKSE HHHHHHHCCCCCCCEEEEECCCEEEEECCCCCEEEEEECHHHHHCCCEEEHHHHHHHHHH LFQLLNVLKDGEEAPAGYCHFPEYAPEYFKQLTAEQLVSKVVKGYTKQEWQKVRERNEVL HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHH DCRIYARAASIALGIDRWPESKWNSLSGKMESKKPKKVIQSKWLGNQNVQ HHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA