Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570763
Identifier: 190570763
GI number: 190570763
Start: 345022
End: 345516
Strand: Direct
Name: 190570763
Synonym: WPa_0321
Alternate gene names: NA
Gene position: 345022-345516 (Clockwise)
Preceding gene: 190570762
Following gene: 190570765
Centisome position: 23.27
GC content: 32.12
Gene sequence:
>495_bases ATGAAATCTCGAAACTCTTATTCAGGTATTGATCCTAAAGTTGTTAATTTAATAAAATTTTACGCAAAATATTATAAATC GCTTACTGATCAAGATATTGAAGACATAGAACAAGACCTCTTCTGTGAGTTTCTTTCATGCATAGATCAGTATGATAAAA CTAAGGGCAGTCTTTCAACCTTTGCTAAGCAAGTTGTTAAAAATCGTATTAATAATCTAGTCCGTAAACACTCACGTACT ACTCCTAAGCTTGAAAATAATGTGCAACAAGAAAGTTACTGCTTTGAAGATGAAACGATACTACGTATTGATGTTGAGCA AATTATTTCAAAATTACCAAAGAAGTGGCAAGTTTTATGTGAACAACTTAAACATCACAGCATTGCTGAAGTTGCAGACA TGAACAATATGTCACGGACTACTTTGTACAACATTCTCAAGAAAATGCGATCTAAATTTGCACCTGTTTACGGAAAAAAG CATAAGAAAAATTGA
Upstream 100 bases:
>100_bases AGGGTAAAAAACTCACGATTGTCTGAGGTATTTTTTTCATGTCCTACAATATTTACTAAGAAAGTTTCATCCTTAAGTCT TTCATTTAAGGACACATCTT
Downstream 100 bases:
>100_bases ACAGTTTTTTGAAATTTAGTGAATTTATATATAGTGGCAAATTAAGGTAAAAGCATGAAAATAATAAACAGCAAAGAAAG AGCAAAAATGGTCACAGGTG
Product: RNA polymerase sigma-70 domain protein
Products: NA
Alternate protein names: Sigma-; Phage Related Protein
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKSRNSYSGIDPKVVNLIKFYAKYYKSLTDQDIEDIEQDLFCEFLSCIDQYDKTKGSLSTFAKQVVKNRINNLVRKHSRT TPKLENNVQQESYCFEDETILRIDVEQIISKLPKKWQVLCEQLKHHSIAEVADMNNMSRTTLYNILKKMRSKFAPVYGKK HKKN
Sequences:
>Translated_164_residues MKSRNSYSGIDPKVVNLIKFYAKYYKSLTDQDIEDIEQDLFCEFLSCIDQYDKTKGSLSTFAKQVVKNRINNLVRKHSRT TPKLENNVQQESYCFEDETILRIDVEQIISKLPKKWQVLCEQLKHHSIAEVADMNNMSRTTLYNILKKMRSKFAPVYGKK HKKN >Mature_164_residues MKSRNSYSGIDPKVVNLIKFYAKYYKSLTDQDIEDIEQDLFCEFLSCIDQYDKTKGSLSTFAKQVVKNRINNLVRKHSRT TPKLENNVQQESYCFEDETILRIDVEQIISKLPKKWQVLCEQLKHHSIAEVADMNNMSRTTLYNILKKMRSKFAPVYGKK HKKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19318; Mature: 19318
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRNSYSGIDPKVVNLIKFYAKYYKSLTDQDIEDIEQDLFCEFLSCIDQYDKTKGSLST CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH FAKQVVKNRINNLVRKHSRTTPKLENNVQQESYCFEDETILRIDVEQIISKLPKKWQVLC HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH EQLKHHSIAEVADMNNMSRTTLYNILKKMRSKFAPVYGKKHKKN HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHCCCCCCC >Mature Secondary Structure MKSRNSYSGIDPKVVNLIKFYAKYYKSLTDQDIEDIEQDLFCEFLSCIDQYDKTKGSLST CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH FAKQVVKNRINNLVRKHSRTTPKLENNVQQESYCFEDETILRIDVEQIISKLPKKWQVLC HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH EQLKHHSIAEVADMNNMSRTTLYNILKKMRSKFAPVYGKKHKKN HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA