Definition Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome.
Accession NC_010981
Length 1,482,455

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The map label for this gene is 190570763

Identifier: 190570763

GI number: 190570763

Start: 345022

End: 345516

Strand: Direct

Name: 190570763

Synonym: WPa_0321

Alternate gene names: NA

Gene position: 345022-345516 (Clockwise)

Preceding gene: 190570762

Following gene: 190570765

Centisome position: 23.27

GC content: 32.12

Gene sequence:

>495_bases
ATGAAATCTCGAAACTCTTATTCAGGTATTGATCCTAAAGTTGTTAATTTAATAAAATTTTACGCAAAATATTATAAATC
GCTTACTGATCAAGATATTGAAGACATAGAACAAGACCTCTTCTGTGAGTTTCTTTCATGCATAGATCAGTATGATAAAA
CTAAGGGCAGTCTTTCAACCTTTGCTAAGCAAGTTGTTAAAAATCGTATTAATAATCTAGTCCGTAAACACTCACGTACT
ACTCCTAAGCTTGAAAATAATGTGCAACAAGAAAGTTACTGCTTTGAAGATGAAACGATACTACGTATTGATGTTGAGCA
AATTATTTCAAAATTACCAAAGAAGTGGCAAGTTTTATGTGAACAACTTAAACATCACAGCATTGCTGAAGTTGCAGACA
TGAACAATATGTCACGGACTACTTTGTACAACATTCTCAAGAAAATGCGATCTAAATTTGCACCTGTTTACGGAAAAAAG
CATAAGAAAAATTGA

Upstream 100 bases:

>100_bases
AGGGTAAAAAACTCACGATTGTCTGAGGTATTTTTTTCATGTCCTACAATATTTACTAAGAAAGTTTCATCCTTAAGTCT
TTCATTTAAGGACACATCTT

Downstream 100 bases:

>100_bases
ACAGTTTTTTGAAATTTAGTGAATTTATATATAGTGGCAAATTAAGGTAAAAGCATGAAAATAATAAACAGCAAAGAAAG
AGCAAAAATGGTCACAGGTG

Product: RNA polymerase sigma-70 domain protein

Products: NA

Alternate protein names: Sigma-; Phage Related Protein

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKSRNSYSGIDPKVVNLIKFYAKYYKSLTDQDIEDIEQDLFCEFLSCIDQYDKTKGSLSTFAKQVVKNRINNLVRKHSRT
TPKLENNVQQESYCFEDETILRIDVEQIISKLPKKWQVLCEQLKHHSIAEVADMNNMSRTTLYNILKKMRSKFAPVYGKK
HKKN

Sequences:

>Translated_164_residues
MKSRNSYSGIDPKVVNLIKFYAKYYKSLTDQDIEDIEQDLFCEFLSCIDQYDKTKGSLSTFAKQVVKNRINNLVRKHSRT
TPKLENNVQQESYCFEDETILRIDVEQIISKLPKKWQVLCEQLKHHSIAEVADMNNMSRTTLYNILKKMRSKFAPVYGKK
HKKN
>Mature_164_residues
MKSRNSYSGIDPKVVNLIKFYAKYYKSLTDQDIEDIEQDLFCEFLSCIDQYDKTKGSLSTFAKQVVKNRINNLVRKHSRT
TPKLENNVQQESYCFEDETILRIDVEQIISKLPKKWQVLCEQLKHHSIAEVADMNNMSRTTLYNILKKMRSKFAPVYGKK
HKKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19318; Mature: 19318

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRNSYSGIDPKVVNLIKFYAKYYKSLTDQDIEDIEQDLFCEFLSCIDQYDKTKGSLST
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
FAKQVVKNRINNLVRKHSRTTPKLENNVQQESYCFEDETILRIDVEQIISKLPKKWQVLC
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH
EQLKHHSIAEVADMNNMSRTTLYNILKKMRSKFAPVYGKKHKKN
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHCCCCCCC
>Mature Secondary Structure
MKSRNSYSGIDPKVVNLIKFYAKYYKSLTDQDIEDIEQDLFCEFLSCIDQYDKTKGSLST
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
FAKQVVKNRINNLVRKHSRTTPKLENNVQQESYCFEDETILRIDVEQIISKLPKKWQVLC
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH
EQLKHHSIAEVADMNNMSRTTLYNILKKMRSKFAPVYGKKHKKN
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA