Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is 190570757
Identifier: 190570757
GI number: 190570757
Start: 331773
End: 333608
Strand: Reverse
Name: 190570757
Synonym: WPa_0314
Alternate gene names: NA
Gene position: 333608-331773 (Counterclockwise)
Preceding gene: 190570758
Following gene: 190570756
Centisome position: 22.5
GC content: 39.81
Gene sequence:
>1836_bases ATGATATACGCTAGAGCTTTTTCTGAAGGTTTAAGACCAGATCCAGAGCTTAAAGTATCAGAGTGGGCGAATGAGTATCG AGTTTTAGCGCCAACTGCAGCATCAGAGCCAGGTAAATGGAGAACAGAGAGAACGCCATACCTTAAAGAAATCATGGATT CACTTTCTCCGTCCTCACCAGCAGAAAAAGTAGTATTCATGAAAGGAGCGCAGATTGGAGGAACAGAAGCAGGTAACAAT TGGATTGGCTATATTATAGATCAGACTCCTGGTCCAATGTTAGTTGTGCAGCCAACAGTTGAAATGGGAAAACGTTGGTC AAAAGGAAGATTTGCGCCGTTAATAGAGAGTACACCATGTTTAAAAAGTAAAGTAAAAGACCCAAGGTCAAGAGATTCAG GCAATACTGTGCAAAGTAAGGAATTTCCAGGTGGAATAGTAGTAATAACCGGAGCAAATAGCAGTGTAGGACTAAGATCC ATGCCAGTAAAATATCTCTTTCTTGATGAAATAGATGCCTACCCAGGAGATTCAGGAGGAGAAGGAGATCCAGTACTGCT CAGTATTGCTCGAACTAATACATTTGCACGTCGAAAGATTTTTTTAGTATCAACGCCAACGATTCATGGAATAAGCAGAA TTGAGAAAGAATTTGAAGCAACAGATAAGAGATATTTTTTTGTACCATGTCCGCATTGTAATTACTATCAAGTTCTAAAA TGGTCACAAATAAAATGGGAAAATAACGACTCAAGAACAGCACATTATGTCTGCACTGAATGTAGCGGCAAAATAGAAAA TCATCAAAAGACAGAGATGCTAGAACGTGGAGAATGGAGAGCTACAGAGGCAAAAGAAGGGGAGAAAAAAGGATTTCATC TTTCAAGTCTTTATAGTCCAGTTGGGTGGTATAGTTGGCAACAAGCAGTAGAGGATTTTCTGCATGCAAAAGAAAGTGAA CAATTACTGAAAGTTTGGATAAATACTACGCTTGGAGAAACTTGGGTAGATAAAGGAGAAGTACCTGATTGGAAGCAATT ATTTAACAGGAGAGAATTTTTTCCCGTAGGCACAGTACCAAAAGGTGAAGTGGTTCTCACAGCAGGAGTAGATGTCCAAA AAGATCGGTTAGAAGTAGAAGTTGTAGCATGGGGAAAAAGCCGTGAAAGTTGGTCAATAGACTACCGAGTATTTGAAGGA GATACAGGAGGTAGGGAAGTATGGGGAAAACTCTCTGAGCTTTTAAATCATCATTTTATTGGTGAAAATGGGCTTGAATA TATGATAAGCATGATGGCGGTTGATGCAGGGTATGCAACGCAGGAAGTATACAACTGGGTAAGAGGTCATCAGGGCTCTG GAAGAGTAATGGCAGTCAAAGGTGTAAATAAAGCTCTAGTGCCACTTAGCAGCCCAAGTAGAGTTGATATAACAGTTGGT GGTCAAAAGCTGAAAAGAGGAATAAAGCTCTGGCCAGTAGGAGTATCGATATTAAAGTCAGAACTTTTTCAATTACTTAA TGTTTTAAAGGACGGTGAAGAAGCTCCAGCAGGATACTGTCATTTTCCCGAGTATGCACCTGAATATTTTAAGCAGCTAA CGGCAGAGCAATTAGTCAGCAAAGTGGTAAAAGGATACACCAAACAAGAGTGGCAAAAGGTAAGAGAAAGAAATGAAGTG CTAGATTGCCGAATTTATGCGAGAGCAGCATCTATTGCACTTGGAATTGATCGTTGGCCAGAGAGTAAATGGAATAGTTT GAGTGGAAAAATGGAAAGCAAAAAGCCTAAAAAAGTAATACAGAGTAAGTGGCTTGGTAATCAAAATGTACAGTGA
Upstream 100 bases:
>100_bases AAAGATATATAGAAAAGGAATTTCAGAAAAAGATGTTTATGGAACTGGAGGAGTGTAGTTCTACTGTTAATGATGTTGCA ATTGTGAGTAGATGCAGATA
Downstream 100 bases:
>100_bases AGAATATTTAACTCAAGTTGAGAAAGCAATTCAAAAACTGCAAAGCGGAGAAAGAGTTGTCTCAATTGCATATGGTGACC ATGTTGTGAGGTACGGGGAA
Product: Phage terminase large subunit GpA
Products: NA
Alternate protein names: Phage Terminase GpA; Terminase GpA; Terminase Large Subunit; Bacteriophage Tail Assembly Protein; DNA Packaging Protein Of Prophage; Bacteriophage Terminase Large Subunit; Prophage LambdaW1 Terminase Large Subunit; DNA Packaging Protein Of Putative Prophage; Bacteriophage Tail Assembly Protein-Like Protein; Phage-Related Terminase Large Subunit; Prophage; DNA Packaging R; Large Subunit Of DNA Packaging Dimer; Phage Terminase GpA Family Protein; Terminase Gpa; DNA Packaging Protein
Number of amino acids: Translated: 611; Mature: 611
Protein sequence:
>611_residues MIYARAFSEGLRPDPELKVSEWANEYRVLAPTAASEPGKWRTERTPYLKEIMDSLSPSSPAEKVVFMKGAQIGGTEAGNN WIGYIIDQTPGPMLVVQPTVEMGKRWSKGRFAPLIESTPCLKSKVKDPRSRDSGNTVQSKEFPGGIVVITGANSSVGLRS MPVKYLFLDEIDAYPGDSGGEGDPVLLSIARTNTFARRKIFLVSTPTIHGISRIEKEFEATDKRYFFVPCPHCNYYQVLK WSQIKWENNDSRTAHYVCTECSGKIENHQKTEMLERGEWRATEAKEGEKKGFHLSSLYSPVGWYSWQQAVEDFLHAKESE QLLKVWINTTLGETWVDKGEVPDWKQLFNRREFFPVGTVPKGEVVLTAGVDVQKDRLEVEVVAWGKSRESWSIDYRVFEG DTGGREVWGKLSELLNHHFIGENGLEYMISMMAVDAGYATQEVYNWVRGHQGSGRVMAVKGVNKALVPLSSPSRVDITVG GQKLKRGIKLWPVGVSILKSELFQLLNVLKDGEEAPAGYCHFPEYAPEYFKQLTAEQLVSKVVKGYTKQEWQKVRERNEV LDCRIYARAASIALGIDRWPESKWNSLSGKMESKKPKKVIQSKWLGNQNVQ
Sequences:
>Translated_611_residues MIYARAFSEGLRPDPELKVSEWANEYRVLAPTAASEPGKWRTERTPYLKEIMDSLSPSSPAEKVVFMKGAQIGGTEAGNN WIGYIIDQTPGPMLVVQPTVEMGKRWSKGRFAPLIESTPCLKSKVKDPRSRDSGNTVQSKEFPGGIVVITGANSSVGLRS MPVKYLFLDEIDAYPGDSGGEGDPVLLSIARTNTFARRKIFLVSTPTIHGISRIEKEFEATDKRYFFVPCPHCNYYQVLK WSQIKWENNDSRTAHYVCTECSGKIENHQKTEMLERGEWRATEAKEGEKKGFHLSSLYSPVGWYSWQQAVEDFLHAKESE QLLKVWINTTLGETWVDKGEVPDWKQLFNRREFFPVGTVPKGEVVLTAGVDVQKDRLEVEVVAWGKSRESWSIDYRVFEG DTGGREVWGKLSELLNHHFIGENGLEYMISMMAVDAGYATQEVYNWVRGHQGSGRVMAVKGVNKALVPLSSPSRVDITVG GQKLKRGIKLWPVGVSILKSELFQLLNVLKDGEEAPAGYCHFPEYAPEYFKQLTAEQLVSKVVKGYTKQEWQKVRERNEV LDCRIYARAASIALGIDRWPESKWNSLSGKMESKKPKKVIQSKWLGNQNVQ >Mature_611_residues MIYARAFSEGLRPDPELKVSEWANEYRVLAPTAASEPGKWRTERTPYLKEIMDSLSPSSPAEKVVFMKGAQIGGTEAGNN WIGYIIDQTPGPMLVVQPTVEMGKRWSKGRFAPLIESTPCLKSKVKDPRSRDSGNTVQSKEFPGGIVVITGANSSVGLRS MPVKYLFLDEIDAYPGDSGGEGDPVLLSIARTNTFARRKIFLVSTPTIHGISRIEKEFEATDKRYFFVPCPHCNYYQVLK WSQIKWENNDSRTAHYVCTECSGKIENHQKTEMLERGEWRATEAKEGEKKGFHLSSLYSPVGWYSWQQAVEDFLHAKESE QLLKVWINTTLGETWVDKGEVPDWKQLFNRREFFPVGTVPKGEVVLTAGVDVQKDRLEVEVVAWGKSRESWSIDYRVFEG DTGGREVWGKLSELLNHHFIGENGLEYMISMMAVDAGYATQEVYNWVRGHQGSGRVMAVKGVNKALVPLSSPSRVDITVG GQKLKRGIKLWPVGVSILKSELFQLLNVLKDGEEAPAGYCHFPEYAPEYFKQLTAEQLVSKVVKGYTKQEWQKVRERNEV LDCRIYARAASIALGIDRWPESKWNSLSGKMESKKPKKVIQSKWLGNQNVQ
Specific function: Unknown
COG id: COG5525
COG function: function code R; Bacteriophage tail assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69035; Mature: 69035
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYARAFSEGLRPDPELKVSEWANEYRVLAPTAASEPGKWRTERTPYLKEIMDSLSPSSP CEECCCHHCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCC AEKVVFMKGAQIGGTEAGNNWIGYIIDQTPGPMLVVQPTVEMGKRWSKGRFAPLIESTPC CCEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCH LKSKVKDPRSRDSGNTVQSKEFPGGIVVITGANSSVGLRSMPVKYLFLDEIDAYPGDSGG HHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEHHCCCCCCCCC EGDPVLLSIARTNTFARRKIFLVSTPTIHGISRIEKEFEATDKRYFFVPCPHCNYYQVLK CCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHEE WSQIKWENNDSRTAHYVCTECSGKIENHQKTEMLERGEWRATEAKEGEKKGFHLSSLYSP EEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCC VGWYSWQQAVEDFLHAKESEQLLKVWINTTLGETWVDKGEVPDWKQLFNRREFFPVGTVP CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHCCCCCCCCCCCC KGEVVLTAGVDVQKDRLEVEVVAWGKSRESWSIDYRVFEGDTGGREVWGKLSELLNHHFI CCCEEEEECCCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCC GENGLEYMISMMAVDAGYATQEVYNWVRGHQGSGRVMAVKGVNKALVPLSSPSRVDITVG CCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCEEEEEEC GQKLKRGIKLWPVGVSILKSELFQLLNVLKDGEEAPAGYCHFPEYAPEYFKQLTAEQLVS HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KVVKGYTKQEWQKVRERNEVLDCRIYARAASIALGIDRWPESKWNSLSGKMESKKPKKVI HHHHCCCHHHHHHHHHHCCEEEEEEEEEHHHHEECCCCCCCCHHHHCCCCCCCCCHHHHH QSKWLGNQNVQ HHHCCCCCCCC >Mature Secondary Structure MIYARAFSEGLRPDPELKVSEWANEYRVLAPTAASEPGKWRTERTPYLKEIMDSLSPSSP CEECCCHHCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCC AEKVVFMKGAQIGGTEAGNNWIGYIIDQTPGPMLVVQPTVEMGKRWSKGRFAPLIESTPC CCEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCH LKSKVKDPRSRDSGNTVQSKEFPGGIVVITGANSSVGLRSMPVKYLFLDEIDAYPGDSGG HHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEHHCCCCCCCCC EGDPVLLSIARTNTFARRKIFLVSTPTIHGISRIEKEFEATDKRYFFVPCPHCNYYQVLK CCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHEE WSQIKWENNDSRTAHYVCTECSGKIENHQKTEMLERGEWRATEAKEGEKKGFHLSSLYSP EEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCC VGWYSWQQAVEDFLHAKESEQLLKVWINTTLGETWVDKGEVPDWKQLFNRREFFPVGTVP CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHCCCCCCCCCCCC KGEVVLTAGVDVQKDRLEVEVVAWGKSRESWSIDYRVFEGDTGGREVWGKLSELLNHHFI CCCEEEEECCCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCC GENGLEYMISMMAVDAGYATQEVYNWVRGHQGSGRVMAVKGVNKALVPLSSPSRVDITVG CCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCEEEEEEC GQKLKRGIKLWPVGVSILKSELFQLLNVLKDGEEAPAGYCHFPEYAPEYFKQLTAEQLVS HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KVVKGYTKQEWQKVRERNEVLDCRIYARAASIALGIDRWPESKWNSLSGKMESKKPKKVI HHHHCCCHHHHHHHHHHCCEEEEEEEEEHHHHEECCCCCCCCHHHHCCCCCCCCCHHHHH QSKWLGNQNVQ HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA